RNA–Protein interactions for RNA: ENST00000606314.1

PCGEM1-202, PCGEM1, prostate-specific transcript, humanhuman

TSL 5 BASIC

Gene PCGEM1, Length 759 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGEM1-202ENST00000606314 AEBP2Q6ZN18 517 aaPredicted RBP24.02■■□□□ 1.44
PCGEM1-202ENST00000606314 CHIC1Q5VXU3 224 aa22.69■■□□□ 1.22
PCGEM1-202ENST00000606314 SENP3Q9H4L4 574 aaPredicted RBP20.53■□□□□ 0.88
PCGEM1-202ENST00000606314 PHF23Q9BUL5 403 aaPredicted RBP20.24■□□□□ 0.83
PCGEM1-202ENST00000606314 FOXD1Q16676 465 aa19.14■□□□□ 0.65
PCGEM1-202ENST00000606314 PLPPR3Q6T4P5 718 aa18.09■□□□□ 0.49
PCGEM1-202ENST00000606314 MSH5O43196 834 aa17.97■□□□□ 0.47
PCGEM1-202ENST00000606314 PIAS4Q8N2W9 510 aaPredicted RBP17.86■□□□□ 0.45
PCGEM1-202ENST00000606314 PPP6R1Q9UPN7 881 aa17.79■□□□□ 0.44
PCGEM1-202ENST00000606314 POTEDQ86YR6 584 aa17.76■□□□□ 0.43
PCGEM1-202ENST00000606314 ADRA2BP18089 450 aa17.73■□□□□ 0.43
PCGEM1-202ENST00000606314 MAPK8IP2Q13387 824 aaPredicted RBP16.32■□□□□ 0.2
PCGEM1-202ENST00000606314 SCAF1Q9H7N4 1312 aaKnown RBP16.25■□□□□ 0.19
PCGEM1-202ENST00000606314 DMRT2Q9Y5R5 561 aa16.25■□□□□ 0.19
PCGEM1-202ENST00000606314 PPP4R3CPQ6ZMV5 832 aa15.83■□□□□ 0.12
PCGEM1-202ENST00000606314 DCAF8L1A6NGE4 600 aa15.61■□□□□ 0.09
PCGEM1-202ENST00000606314 HOXD11P31277 338 aaPredicted RBP15.6■□□□□ 0.09
PCGEM1-202ENST00000606314 CNKSR2Q8WXI2 1034 aa15.57■□□□□ 0.08
PCGEM1-202ENST00000606314 CACNB1Q02641 598 aaPredicted RBP15.51■□□□□ 0.07
PCGEM1-202ENST00000606314 RNF216Q9NWF9 866 aaPredicted RBP15.45■□□□□ 0.06
PCGEM1-202ENST00000606314 NISCHQ9Y2I1 1504 aa15.42■□□□□ 0.06
PCGEM1-202ENST00000606314 RNF39Q9H2S5 420 aa15.31■□□□□ 0.04
PCGEM1-202ENST00000606314 NCBP3Q53F19 620 aaKnown RBP15.19■□□□□ 0.02
PCGEM1-202ENST00000606314 DNAJC5BQ9UF47 199 aa15.1■□□□□ 0.01
PCGEM1-202ENST00000606314 C1QBPQ07021 282 aaKnown RBP15.09■□□□□ 0.01
PCGEM1-202ENST00000606314 NPM3O75607 178 aaKnown RBP14.96□□□□□ -0.01
PCGEM1-202ENST00000606314 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.87□□□□□ -0.03
PCGEM1-202ENST00000606314 KCNA4P22459 653 aa14.55□□□□□ -0.08
PCGEM1-202ENST00000606314 U3KPZ7 1027 aaPredicted RBP14.54□□□□□ -0.08
PCGEM1-202ENST00000606314 CAPN15O75808 1086 aa14.36□□□□□ -0.11
PCGEM1-202ENST00000606314 SPINK5Q9NQ38 1064 aaPredicted RBP14.36□□□□□ -0.11
PCGEM1-202ENST00000606314 SLC4A2P04920 1241 aa14.31□□□□□ -0.12
PCGEM1-202ENST00000606314 DSG3P32926 999 aa14.3□□□□□ -0.12
PCGEM1-202ENST00000606314 APLP2Q06481 763 aa14.14□□□□□ -0.15
PCGEM1-202ENST00000606314 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.1□□□□□ -0.15
PCGEM1-202ENST00000606314 TRHP20396 242 aaPredicted RBP14.1□□□□□ -0.15
PCGEM1-202ENST00000606314 HNRNPUL2Q1KMD3 747 aaKnown RBP14.1□□□□□ -0.15
PCGEM1-202ENST00000606314 ZNF219Q9P2Y4 722 aaPredicted RBP14.07□□□□□ -0.16
PCGEM1-202ENST00000606314 ABCB7O75027 752 aa14.01□□□□□ -0.17
PCGEM1-202ENST00000606314 SAMD1Q6SPF0 538 aaPredicted RBP14□□□□□ -0.17
PCGEM1-202ENST00000606314 POTEHQ6S545 545 aa13.9□□□□□ -0.18
PCGEM1-202ENST00000606314 MYCNP04198 464 aaPredicted RBP13.85□□□□□ -0.19
PCGEM1-202ENST00000606314 SLC4A1APQ9BWU0 796 aaKnown RBP13.72□□□□□ -0.21
PCGEM1-202ENST00000606314 CCDC180Q9P1Z9 1646 aa13.68□□□□□ -0.22
PCGEM1-202ENST00000606314 POLA2Q14181 598 aa13.68□□□□□ -0.22
PCGEM1-202ENST00000606314 RBM42Q9BTD8 480 aaKnown RBP13.66□□□□□ -0.22
PCGEM1-202ENST00000606314 FOXD4L1Q9NU39 408 aa13.62□□□□□ -0.23
PCGEM1-202ENST00000606314 ATF5Q9Y2D1 282 aaPredicted RBP13.52□□□□□ -0.25
PCGEM1-202ENST00000606314 ZBTB12Q9Y330 459 aaPredicted RBP13.41□□□□□ -0.26
PCGEM1-202ENST00000606314 CHRDL2Q6WN34 429 aa13.4□□□□□ -0.26
PCGEM1-202ENST00000606314 ZBTB22O15209 634 aa13.36□□□□□ -0.27
PCGEM1-202ENST00000606314 AKT1S1Q96B36 256 aa13.32□□□□□ -0.28
PCGEM1-202ENST00000606314 OSCARQ8IYS5 282 aa13.25□□□□□ -0.29
PCGEM1-202ENST00000606314 ATXN8OSP0DMR3 200 aa13.23□□□□□ -0.29
PCGEM1-202ENST00000606314 REM2Q8IYK8 340 aaPredicted RBP13.19□□□□□ -0.3
PCGEM1-202ENST00000606314 ABCC9O60706 1549 aa13.11□□□□□ -0.31
PCGEM1-202ENST00000606314 PIP4P2Q8N4L2 257 aa13.06□□□□□ -0.32
PCGEM1-202ENST00000606314 PITPNM1O00562 1244 aa13.04□□□□□ -0.32
PCGEM1-202ENST00000606314 FBLN2P98095 1184 aa13.03□□□□□ -0.32
PCGEM1-202ENST00000606314 SPDYE2BA6NHP3 402 aa12.98□□□□□ -0.33
PCGEM1-202ENST00000606314 SPDYE6P0CI01 402 aa12.98□□□□□ -0.33
PCGEM1-202ENST00000606314 SPDYE2Q495Y8 402 aa12.98□□□□□ -0.33
PCGEM1-202ENST00000606314 SP7Q8TDD2 431 aaPredicted RBP12.97□□□□□ -0.33
PCGEM1-202ENST00000606314 FXR2P51116 673 aaKnown RBP eCLIP12.96□□□□□ -0.33
PCGEM1-202ENST00000606314 MKRN4PQ13434 485 aaPredicted RBP12.89□□□□□ -0.35
PCGEM1-202ENST00000606314 MYO15BQ96JP2 1530 aa12.88□□□□□ -0.35
PCGEM1-202ENST00000606314 ZCCHC6Q5VYS8 1495 aaKnown RBP12.87□□□□□ -0.35
PCGEM1-202ENST00000606314 HAX1O00165 279 aa12.87□□□□□ -0.35
PCGEM1-202ENST00000606314 DCAF1Q9Y4B6 1507 aa12.86□□□□□ -0.35
PCGEM1-202ENST00000606314 NACADO15069 1562 aa12.86□□□□□ -0.35
PCGEM1-202ENST00000606314 ZNF692Q9BU19 519 aaPredicted RBP12.81□□□□□ -0.36
PCGEM1-202ENST00000606314 RB1CC1Q8TDY2 1594 aa12.81□□□□□ -0.36
PCGEM1-202ENST00000606314 SPDYE1Q8NFV5 336 aaPredicted RBP12.79□□□□□ -0.36
PCGEM1-202ENST00000606314 CLEC11AQ9Y240 323 aa12.78□□□□□ -0.36
PCGEM1-202ENST00000606314 SSUH2Q9Y2M2 353 aa12.78□□□□□ -0.36
PCGEM1-202ENST00000606314 DCAF8L2P0C7V8 631 aa12.76□□□□□ -0.37
PCGEM1-202ENST00000606314 PRKAR2AP13861 404 aaKnown RBP12.72□□□□□ -0.37
PCGEM1-202ENST00000606314 EVX2Q03828 476 aa12.68□□□□□ -0.38
PCGEM1-202ENST00000606314 CSRNP3Q8WYN3 585 aa12.64□□□□□ -0.39
PCGEM1-202ENST00000606314 PABPN1Q86U42 306 aaKnown RBP eCLIP12.61□□□□□ -0.39
PCGEM1-202ENST00000606314 C19orf67A6NJJ6 358 aa12.55□□□□□ -0.4
PCGEM1-202ENST00000606314 PRR29P0C7W0 189 aa12.55□□□□□ -0.4
PCGEM1-202ENST00000606314 CHADLQ6NUI6 762 aa12.54□□□□□ -0.4
PCGEM1-202ENST00000606314 SHROOM4Q9ULL8 1493 aa12.41□□□□□ -0.42
PCGEM1-202ENST00000606314 EHMT2Q96KQ7 1210 aa12.41□□□□□ -0.42
PCGEM1-202ENST00000606314 GABBR2O75899 941 aa12.4□□□□□ -0.42
PCGEM1-202ENST00000606314 SCRIBQ14160 1630 aa12.37□□□□□ -0.43
PCGEM1-202ENST00000606314 UNC13AQ9UPW8 1703 aa12.37□□□□□ -0.43
PCGEM1-202ENST00000606314 FARP1Q9Y4F1 1045 aaPredicted RBP12.33□□□□□ -0.44
PCGEM1-202ENST00000606314 CD44P16070 742 aaKnown RBP12.3□□□□□ -0.44
PCGEM1-202ENST00000606314 BICRAQ9NZM4 1560 aa12.3□□□□□ -0.44
PCGEM1-202ENST00000606314 STAG3Q9UJ98 1225 aa12.25□□□□□ -0.45
PCGEM1-202ENST00000606314 SPDYE4A6NLX3 237 aa12.23□□□□□ -0.45
PCGEM1-202ENST00000606314 CREBZFQ9NS37 354 aa12.19□□□□□ -0.46
PCGEM1-202ENST00000606314 CLCN6P51797 869 aa12.18□□□□□ -0.46
PCGEM1-202ENST00000606314 LHX8Q68G74 356 aa12.17□□□□□ -0.46
PCGEM1-202ENST00000606314 POTEIP0CG38 1075 aa12.12□□□□□ -0.47
PCGEM1-202ENST00000606314 ZRANB1Q9UGI0 708 aa12.11□□□□□ -0.47
PCGEM1-202ENST00000606314 ZNF579Q8NAF0 562 aaKnown RBP12.1□□□□□ -0.47
PCGEM1-202ENST00000606314 DCBLD2Q96PD2 775 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms