RNA–Protein interactions for RNA: ENST00000605497.5

PALMD-203, Transcript of palmdelphin, humanhuman

TSL 1 (best) BASIC

Gene PALMD, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALMD-203ENST00000605497 AEBP2Q6ZN18 517 aaPredicted RBP18.01■□□□□ 0.47
PALMD-203ENST00000605497 CHIC1Q5VXU3 224 aa16.98■□□□□ 0.31
PALMD-203ENST00000605497 SENP3Q9H4L4 574 aaPredicted RBP15.58■□□□□ 0.09
PALMD-203ENST00000605497 PHF23Q9BUL5 403 aaPredicted RBP15.25■□□□□ 0.03
PALMD-203ENST00000605497 FOXD1Q16676 465 aa14.51□□□□□ -0.09
PALMD-203ENST00000605497 POTEDQ86YR6 584 aa14.39□□□□□ -0.11
PALMD-203ENST00000605497 MSH5O43196 834 aa13.89□□□□□ -0.19
PALMD-203ENST00000605497 PIAS4Q8N2W9 510 aaPredicted RBP13.46□□□□□ -0.25
PALMD-203ENST00000605497 PLPPR3Q6T4P5 718 aa13.11□□□□□ -0.31
PALMD-203ENST00000605497 PPP6R1Q9UPN7 881 aa13.1□□□□□ -0.31
PALMD-203ENST00000605497 ADRA2BP18089 450 aa13.05□□□□□ -0.32
PALMD-203ENST00000605497 DMRT2Q9Y5R5 561 aa12.24□□□□□ -0.45
PALMD-203ENST00000605497 CACNB1Q02641 598 aaPredicted RBP12.23□□□□□ -0.45
PALMD-203ENST00000605497 MAPK8IP2Q13387 824 aaPredicted RBP12.13□□□□□ -0.47
PALMD-203ENST00000605497 SCAF1Q9H7N4 1312 aaKnown RBP12.12□□□□□ -0.47
PALMD-203ENST00000605497 DCAF8L1A6NGE4 600 aa11.78□□□□□ -0.52
PALMD-203ENST00000605497 RNF39Q9H2S5 420 aa11.74□□□□□ -0.53
PALMD-203ENST00000605497 C1QBPQ07021 282 aaKnown RBP11.6□□□□□ -0.55
PALMD-203ENST00000605497 HOXD11P31277 338 aaPredicted RBP11.58□□□□□ -0.56
PALMD-203ENST00000605497 PPP4R3CPQ6ZMV5 832 aa11.39□□□□□ -0.59
PALMD-203ENST00000605497 RNF216Q9NWF9 866 aaPredicted RBP11.37□□□□□ -0.59
PALMD-203ENST00000605497 DNAJC5BQ9UF47 199 aa11.37□□□□□ -0.59
PALMD-203ENST00000605497 CNKSR2Q8WXI2 1034 aa11.34□□□□□ -0.59
PALMD-203ENST00000605497 POTEHQ6S545 545 aa11.2□□□□□ -0.62
PALMD-203ENST00000605497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.07□□□□□ -0.644e-7■■■■□ 24.8
PALMD-203ENST00000605497 SLC24A1O60721 1099 aa10.99□□□□□ -0.65
PALMD-203ENST00000605497 NCBP3Q53F19 620 aaKnown RBP10.88□□□□□ -0.67
PALMD-203ENST00000605497 DSG3P32926 999 aa10.8□□□□□ -0.68
PALMD-203ENST00000605497 CAPN15O75808 1086 aa10.77□□□□□ -0.69
PALMD-203ENST00000605497 U3KPZ7 1027 aaPredicted RBP10.7□□□□□ -0.7
PALMD-203ENST00000605497 SPINK5Q9NQ38 1064 aaPredicted RBP10.68□□□□□ -0.7
PALMD-203ENST00000605497 MYT1Q01538 1121 aa10.62□□□□□ -0.71
PALMD-203ENST00000605497 NPM3O75607 178 aaKnown RBP10.59□□□□□ -0.71
PALMD-203ENST00000605497 APLP2Q06481 763 aa10.52□□□□□ -0.72
PALMD-203ENST00000605497 TTBK1Q5TCY1 1321 aaPredicted RBP10.49□□□□□ -0.73
PALMD-203ENST00000605497 PELP1Q8IZL8 1130 aaKnown RBP10.48□□□□□ -0.73
PALMD-203ENST00000605497 ZNF219Q9P2Y4 722 aaPredicted RBP10.46□□□□□ -0.73
PALMD-203ENST00000605497 TRHP20396 242 aaPredicted RBP10.45□□□□□ -0.74
PALMD-203ENST00000605497 RBM42Q9BTD8 480 aaKnown RBP10.43□□□□□ -0.74
PALMD-203ENST00000605497 ABCB7O75027 752 aa10.41□□□□□ -0.74
PALMD-203ENST00000605497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.35□□□□□ -0.75
PALMD-203ENST00000605497 HNRNPUL2Q1KMD3 747 aaKnown RBP10.35□□□□□ -0.75
PALMD-203ENST00000605497 CHRDL2Q6WN34 429 aa10.34□□□□□ -0.75
PALMD-203ENST00000605497 SP7Q8TDD2 431 aaPredicted RBP10.25□□□□□ -0.77
PALMD-203ENST00000605497 DAXXQ9UER7 740 aaPredicted RBP10.25□□□□□ -0.77
PALMD-203ENST00000605497 SLC4A2P04920 1241 aa10.23□□□□□ -0.77
PALMD-203ENST00000605497 SAMD1Q6SPF0 538 aaPredicted RBP10.23□□□□□ -0.77
PALMD-203ENST00000605497 ERICH6Q7L0X2 663 aa10.09□□□□□ -0.79
PALMD-203ENST00000605497 PRKCSHP14314 528 aaPredicted RBP10.08□□□□□ -0.8
PALMD-203ENST00000605497 POLA2Q14181 598 aa10.04□□□□□ -0.8
PALMD-203ENST00000605497 AKT1S1Q96B36 256 aa10.03□□□□□ -0.8
PALMD-203ENST00000605497 HAX1O00165 279 aa9.96□□□□□ -0.81
PALMD-203ENST00000605497 PIP4P2Q8N4L2 257 aa9.95□□□□□ -0.82
PALMD-203ENST00000605497 REM2Q8IYK8 340 aaPredicted RBP9.9□□□□□ -0.83
PALMD-203ENST00000605497 ZBTB12Q9Y330 459 aaPredicted RBP9.9□□□□□ -0.83
PALMD-203ENST00000605497 MYCNP04198 464 aaPredicted RBP9.88□□□□□ -0.83
PALMD-203ENST00000605497 KCNA4P22459 653 aa9.88□□□□□ -0.83
PALMD-203ENST00000605497 FXR2P51116 673 aaKnown RBP eCLIP9.82□□□□□ -0.84
PALMD-203ENST00000605497 PITPNM1O00562 1244 aa9.77□□□□□ -0.85
PALMD-203ENST00000605497 OSCARQ8IYS5 282 aa9.7□□□□□ -0.86
PALMD-203ENST00000605497 EVX2Q03828 476 aa9.68□□□□□ -0.86
PALMD-203ENST00000605497 EHMT2Q96KQ7 1210 aa9.66□□□□□ -0.86
PALMD-203ENST00000605497 LHX8Q68G74 356 aa9.62□□□□□ -0.87
PALMD-203ENST00000605497 RTN4Q9NQC3 1192 aaKnown RBP9.58□□□□□ -0.88
PALMD-203ENST00000605497 ATF5Q9Y2D1 282 aaPredicted RBP9.56□□□□□ -0.88
PALMD-203ENST00000605497 ARXQ96QS3 562 aa9.55□□□□□ -0.88
PALMD-203ENST00000605497 PRKAR2AP13861 404 aaKnown RBP9.54□□□□□ -0.88
PALMD-203ENST00000605497 C19orf67A6NJJ6 358 aa9.53□□□□□ -0.88
PALMD-203ENST00000605497 GABBR2O75899 941 aa9.52□□□□□ -0.89
PALMD-203ENST00000605497 SPDYE2BA6NHP3 402 aa9.5□□□□□ -0.89
PALMD-203ENST00000605497 SPDYE6P0CI01 402 aa9.5□□□□□ -0.89
PALMD-203ENST00000605497 SPDYE2Q495Y8 402 aa9.5□□□□□ -0.89
PALMD-203ENST00000605497 SPDYE1Q8NFV5 336 aaPredicted RBP9.48□□□□□ -0.89
PALMD-203ENST00000605497 EIF5BO60841 1220 aaKnown RBP9.47□□□□□ -0.89
PALMD-203ENST00000605497 FOXD4L1Q9NU39 408 aa9.46□□□□□ -0.9
PALMD-203ENST00000605497 PLSCR2Q9NRY7 297 aa9.44□□□□□ -0.9
PALMD-203ENST00000605497 CLEC11AQ9Y240 323 aa9.44□□□□□ -0.9
PALMD-203ENST00000605497 FBLN2P98095 1184 aa9.4□□□□□ -0.9
PALMD-203ENST00000605497 AMER1Q5JTC6 1135 aaPredicted RBP9.39□□□□□ -0.91
PALMD-203ENST00000605497 RANGAP1P46060 587 aaPredicted RBP9.39□□□□□ -0.91
PALMD-203ENST00000605497 CLCN6P51797 869 aa9.33□□□□□ -0.92
PALMD-203ENST00000605497 BCL11AQ9H165 835 aa9.29□□□□□ -0.92
PALMD-203ENST00000605497 TIMELESSQ9UNS1 1208 aa9.29□□□□□ -0.92
PALMD-203ENST00000605497 ATXN8OSP0DMR3 200 aa9.28□□□□□ -0.92
PALMD-203ENST00000605497 ZNF692Q9BU19 519 aaPredicted RBP9.28□□□□□ -0.92
PALMD-203ENST00000605497 SLC4A1APQ9BWU0 796 aaKnown RBP9.28□□□□□ -0.92
PALMD-203ENST00000605497 CHADLQ6NUI6 762 aa9.26□□□□□ -0.93
PALMD-203ENST00000605497 SSUH2Q9Y2M2 353 aa9.25□□□□□ -0.93
PALMD-203ENST00000605497 PRR29P0C7W0 189 aa9.25□□□□□ -0.93
PALMD-203ENST00000605497 POTEIP0CG38 1075 aa9.25□□□□□ -0.93
PALMD-203ENST00000605497 CD44P16070 742 aaKnown RBP9.21□□□□□ -0.94
PALMD-203ENST00000605497 DCBLD2Q96PD2 775 aa9.2□□□□□ -0.94
PALMD-203ENST00000605497 HOMEZQ8IX15 550 aa9.19□□□□□ -0.94
PALMD-203ENST00000605497 KLHL34Q8N239 644 aa9.15□□□□□ -0.94
PALMD-203ENST00000605497 FARP1Q9Y4F1 1045 aaPredicted RBP9.13□□□□□ -0.95
PALMD-203ENST00000605497 TULP1O00294 542 aaPredicted RBP9.12□□□□□ -0.95
PALMD-203ENST00000605497 MKRN4PQ13434 485 aaPredicted RBP9.12□□□□□ -0.95
PALMD-203ENST00000605497 PABPN1Q86U42 306 aaKnown RBP eCLIP9.1□□□□□ -0.95
PALMD-203ENST00000605497 PLEKHG5O94827 1062 aa9.09□□□□□ -0.95
PALMD-203ENST00000605497 FAM9AQ8IZU1 332 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms