RNA–Protein interactions for RNA: ENST00000604811.1

AP000942.4-201, humanhuman

BASIC

Gene AP000942.4, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000942.4-201ENST00000604811 AEBP2Q6ZN18 517 aaPredicted RBP27.18■■□□□ 1.94
AP000942.4-201ENST00000604811 CHIC1Q5VXU3 224 aa25.25■■□□□ 1.63
AP000942.4-201ENST00000604811 SENP3Q9H4L4 574 aaPredicted RBP23.16■■□□□ 1.3
AP000942.4-201ENST00000604811 PHF23Q9BUL5 403 aaPredicted RBP22.81■■□□□ 1.24
AP000942.4-201ENST00000604811 FOXD1Q16676 465 aa21.73■■□□□ 1.07
AP000942.4-201ENST00000604811 POTEDQ86YR6 584 aa21.09■□□□□ 0.97
AP000942.4-201ENST00000604811 MSH5O43196 834 aa20.49■□□□□ 0.87
AP000942.4-201ENST00000604811 PIAS4Q8N2W9 510 aaPredicted RBP20.09■□□□□ 0.81
AP000942.4-201ENST00000604811 PPP6R1Q9UPN7 881 aa19.89■□□□□ 0.77
AP000942.4-201ENST00000604811 PLPPR3Q6T4P5 718 aa19.78■□□□□ 0.76
AP000942.4-201ENST00000604811 ADRA2BP18089 450 aa19.74■□□□□ 0.75
AP000942.4-201ENST00000604811 MAPK8IP2Q13387 824 aaPredicted RBP18.33■□□□□ 0.52
AP000942.4-201ENST00000604811 DMRT2Q9Y5R5 561 aa18.32■□□□□ 0.52
AP000942.4-201ENST00000604811 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
AP000942.4-201ENST00000604811 CACNB1Q02641 598 aaPredicted RBP17.91■□□□□ 0.46
AP000942.4-201ENST00000604811 RNF39Q9H2S5 420 aa17.48■□□□□ 0.39
AP000942.4-201ENST00000604811 DCAF8L1A6NGE4 600 aa17.47■□□□□ 0.39
AP000942.4-201ENST00000604811 HOXD11P31277 338 aaPredicted RBP17.43■□□□□ 0.38
AP000942.4-201ENST00000604811 PPP4R3CPQ6ZMV5 832 aa17.28■□□□□ 0.36
AP000942.4-201ENST00000604811 C1QBPQ07021 282 aaKnown RBP17.14■□□□□ 0.33
AP000942.4-201ENST00000604811 RNF216Q9NWF9 866 aaPredicted RBP17.1■□□□□ 0.33
AP000942.4-201ENST00000604811 CNKSR2Q8WXI2 1034 aa17.08■□□□□ 0.32
AP000942.4-201ENST00000604811 DNAJC5BQ9UF47 199 aa16.93■□□□□ 0.3
AP000942.4-201ENST00000604811 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.48■□□□□ 0.23
AP000942.4-201ENST00000604811 POTEHQ6S545 545 aa16.38■□□□□ 0.21
AP000942.4-201ENST00000604811 NCBP3Q53F19 620 aaKnown RBP16.34■□□□□ 0.21
AP000942.4-201ENST00000604811 NPM3O75607 178 aaKnown RBP16.24■□□□□ 0.19
AP000942.4-201ENST00000604811 U3KPZ7 1027 aaPredicted RBP16.19■□□□□ 0.18
AP000942.4-201ENST00000604811 DSG3P32926 999 aa16.17■□□□□ 0.18
AP000942.4-201ENST00000604811 SPINK5Q9NQ38 1064 aaPredicted RBP16.12■□□□□ 0.17
AP000942.4-201ENST00000604811 CAPN15O75808 1086 aa16.03■□□□□ 0.16
AP000942.4-201ENST00000604811 SLC4A2P04920 1241 aa15.7■□□□□ 0.1
AP000942.4-201ENST00000604811 ABCB7O75027 752 aa15.65■□□□□ 0.1
AP000942.4-201ENST00000604811 TRHP20396 242 aaPredicted RBP15.64■□□□□ 0.09
AP000942.4-201ENST00000604811 ZNF219Q9P2Y4 722 aaPredicted RBP15.58■□□□□ 0.08
AP000942.4-201ENST00000604811 APLP2Q06481 763 aa15.5■□□□□ 0.07
AP000942.4-201ENST00000604811 KCNA4P22459 653 aa15.39■□□□□ 0.05
AP000942.4-201ENST00000604811 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.38■□□□□ 0.05
AP000942.4-201ENST00000604811 HNRNPUL2Q1KMD3 747 aaKnown RBP15.38■□□□□ 0.05
AP000942.4-201ENST00000604811 RBM42Q9BTD8 480 aaKnown RBP15.34■□□□□ 0.05
AP000942.4-201ENST00000604811 CHRDL2Q6WN34 429 aa15.3■□□□□ 0.04
AP000942.4-201ENST00000604811 SAMD1Q6SPF0 538 aaPredicted RBP15.29■□□□□ 0.04
AP000942.4-201ENST00000604811 POLA2Q14181 598 aa15.11■□□□□ 0.01
AP000942.4-201ENST00000604811 SP7Q8TDD2 431 aaPredicted RBP15.07■□□□□ 0
AP000942.4-201ENST00000604811 MYCNP04198 464 aaPredicted RBP14.97□□□□□ -0.01
AP000942.4-201ENST00000604811 AKT1S1Q96B36 256 aa14.91□□□□□ -0.02
AP000942.4-201ENST00000604811 PIP4P2Q8N4L2 257 aa14.84□□□□□ -0.03
AP000942.4-201ENST00000604811 REM2Q8IYK8 340 aaPredicted RBP14.79□□□□□ -0.04
AP000942.4-201ENST00000604811 ATF5Q9Y2D1 282 aaPredicted RBP14.77□□□□□ -0.05
AP000942.4-201ENST00000604811 ZBTB12Q9Y330 459 aaPredicted RBP14.7□□□□□ -0.06
AP000942.4-201ENST00000604811 OSCARQ8IYS5 282 aa14.68□□□□□ -0.06
AP000942.4-201ENST00000604811 FXR2P51116 673 aaKnown RBP eCLIP14.67□□□□□ -0.06
AP000942.4-201ENST00000604811 PITPNM1O00562 1244 aa14.66□□□□□ -0.06
AP000942.4-201ENST00000604811 HAX1O00165 279 aa14.65□□□□□ -0.06
AP000942.4-201ENST00000604811 EVX2Q03828 476 aa14.57□□□□□ -0.08
AP000942.4-201ENST00000604811 FOXD4L1Q9NU39 408 aa14.5□□□□□ -0.09
AP000942.4-201ENST00000604811 SLC4A1APQ9BWU0 796 aaKnown RBP14.33□□□□□ -0.12
AP000942.4-201ENST00000604811 PRKAR2AP13861 404 aaKnown RBP14.24□□□□□ -0.13
AP000942.4-201ENST00000604811 SPDYE2BA6NHP3 402 aa14.23□□□□□ -0.13
AP000942.4-201ENST00000604811 SPDYE6P0CI01 402 aa14.23□□□□□ -0.13
AP000942.4-201ENST00000604811 SPDYE2Q495Y8 402 aa14.23□□□□□ -0.13
AP000942.4-201ENST00000604811 C19orf67A6NJJ6 358 aa14.22□□□□□ -0.13
AP000942.4-201ENST00000604811 ZBTB22O15209 634 aa14.19□□□□□ -0.14
AP000942.4-201ENST00000604811 GABBR2O75899 941 aa14.14□□□□□ -0.15
AP000942.4-201ENST00000604811 SPDYE1Q8NFV5 336 aaPredicted RBP14.11□□□□□ -0.15
AP000942.4-201ENST00000604811 CLEC11AQ9Y240 323 aa14.11□□□□□ -0.15
AP000942.4-201ENST00000604811 ATXN8OSP0DMR3 200 aa14.1□□□□□ -0.15
AP000942.4-201ENST00000604811 LHX8Q68G74 356 aa14.1□□□□□ -0.15
AP000942.4-201ENST00000604811 FBLN2P98095 1184 aa14.07□□□□□ -0.16
AP000942.4-201ENST00000604811 MKRN4PQ13434 485 aaPredicted RBP14.06□□□□□ -0.16
AP000942.4-201ENST00000604811 SSUH2Q9Y2M2 353 aa14.05□□□□□ -0.16
AP000942.4-201ENST00000604811 CHADLQ6NUI6 762 aa13.97□□□□□ -0.17
AP000942.4-201ENST00000604811 ZNF692Q9BU19 519 aaPredicted RBP13.95□□□□□ -0.18
AP000942.4-201ENST00000604811 POTEIP0CG38 1075 aa13.91□□□□□ -0.18
AP000942.4-201ENST00000604811 PRR29P0C7W0 189 aa13.79□□□□□ -0.2
AP000942.4-201ENST00000604811 PABPN1Q86U42 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
AP000942.4-201ENST00000604811 CD44P16070 742 aaKnown RBP13.74□□□□□ -0.21
AP000942.4-201ENST00000604811 FARP1Q9Y4F1 1045 aaPredicted RBP13.69□□□□□ -0.22
AP000942.4-201ENST00000604811 CLCN6P51797 869 aa13.63□□□□□ -0.23
AP000942.4-201ENST00000604811 PLSCR2Q9NRY7 297 aa13.63□□□□□ -0.23
AP000942.4-201ENST00000604811 ZNF579Q8NAF0 562 aaKnown RBP13.54□□□□□ -0.24
AP000942.4-201ENST00000604811 DCBLD2Q96PD2 775 aa13.54□□□□□ -0.24
AP000942.4-201ENST00000604811 OTUD5Q96G74 571 aa13.47□□□□□ -0.25
AP000942.4-201ENST00000604811 ZRANB1Q9UGI0 708 aa13.45□□□□□ -0.26
AP000942.4-201ENST00000604811 POTEB2H3BUK9 544 aa13.44□□□□□ -0.26
AP000942.4-201ENST00000604811 GALR2O43603 387 aaPredicted RBP13.44□□□□□ -0.26
AP000942.4-201ENST00000604811 CREBZFQ9NS37 354 aa13.41□□□□□ -0.26
AP000942.4-201ENST00000604811 POTEMA6NI47 508 aa13.32□□□□□ -0.28
AP000942.4-201ENST00000604811 PELP1Q8IZL8 1130 aaKnown RBP13.26□□□□□ -0.29
AP000942.4-201ENST00000604811 POTEGQ6S5H5 508 aa13.25□□□□□ -0.29
AP000942.4-201ENST00000604811 PHF12Q96QT6 1004 aa13.24□□□□□ -0.29
AP000942.4-201ENST00000604811 STAG3Q9UJ98 1225 aa13.19□□□□□ -0.3
AP000942.4-201ENST00000604811 POTEJP0CG39 1038 aa13.15□□□□□ -0.3
AP000942.4-201ENST00000604811 MNX1P50219 401 aaPredicted RBP13.15□□□□□ -0.3
AP000942.4-201ENST00000604811 PAK3O75914 559 aaPredicted RBP13.12□□□□□ -0.31
AP000942.4-201ENST00000604811 ASTLQ6HA08 431 aaPredicted RBP13.11□□□□□ -0.31
AP000942.4-201ENST00000604811 LCE2DQ5TA82 110 aaPredicted RBP13.1□□□□□ -0.31
AP000942.4-201ENST00000604811 PCDH10Q9P2E7 1040 aa13.09□□□□□ -0.31
AP000942.4-201ENST00000604811 METRNQ9UJH8 293 aa13.09□□□□□ -0.31
AP000942.4-201ENST00000604811 ATMINO43313 823 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms