RNA–Protein interactions for RNA: ENST00000604729.5

ZSWIM8-221, Transcript of zinc finger SWIM-type containing 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ZSWIM8, Length 6,075 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8-221ENST00000604729 DCAF8L2P0C7V8 631 aa28.27■■■□□ 2.12
ZSWIM8-221ENST00000604729 NISCHQ9Y2I1 1504 aa26.48■■□□□ 1.83
ZSWIM8-221ENST00000604729 SHROOM4Q9ULL8 1493 aa25.41■■□□□ 1.66
ZSWIM8-221ENST00000604729 SUPT5HO00267 1087 aaKnown RBP25.36■■□□□ 1.65
ZSWIM8-221ENST00000604729 EHMT2Q96KQ7 1210 aa25■■□□□ 1.59
ZSWIM8-221ENST00000604729 FAM9AQ8IZU1 332 aaPredicted RBP24.95■■□□□ 1.59
ZSWIM8-221ENST00000604729 APLP2Q06481 763 aa24.32■■□□□ 1.48
ZSWIM8-221ENST00000604729 RANGAP1P46060 587 aaPredicted RBP24.3■■□□□ 1.48
ZSWIM8-221ENST00000604729 ATP1B4Q9UN42 357 aaPredicted RBP24.24■■□□□ 1.47
ZSWIM8-221ENST00000604729 ABCC9O60706 1549 aa24.1■■□□□ 1.45
ZSWIM8-221ENST00000604729 TTBK1Q5TCY1 1321 aaPredicted RBP24.05■■□□□ 1.44
ZSWIM8-221ENST00000604729 MYT1LQ9UL68 1186 aa23.91■■□□□ 1.42
ZSWIM8-221ENST00000604729 PABPN1Q86U42 306 aaKnown RBP eCLIP23.87■■□□□ 1.411e-6■■■■□ 24.5
ZSWIM8-221ENST00000604729 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.66■■□□□ 1.38
ZSWIM8-221ENST00000604729 HNRNPUL2Q1KMD3 747 aaKnown RBP23.66■■□□□ 1.38
ZSWIM8-221ENST00000604729 UBTFP17480 764 aaKnown RBP23.5■■□□□ 1.35
ZSWIM8-221ENST00000604729 TRIM41Q8WV44 630 aa23.5■■□□□ 1.35
ZSWIM8-221ENST00000604729 CHIC1Q5VXU3 224 aa23.45■■□□□ 1.35
ZSWIM8-221ENST00000604729 FBLN2P98095 1184 aa23.31■■□□□ 1.32
ZSWIM8-221ENST00000604729 PLPPR3Q6T4P5 718 aa22.77■■□□□ 1.23
ZSWIM8-221ENST00000604729 ITGAEP38570 1179 aa22.74■■□□□ 1.23
ZSWIM8-221ENST00000604729 PCGF6Q9BYE7 350 aa22.69■■□□□ 1.22
ZSWIM8-221ENST00000604729 SLC4A1APQ9BWU0 796 aaKnown RBP22.65■■□□□ 1.22
ZSWIM8-221ENST00000604729 BCANQ96GW7 911 aa22.6■■□□□ 1.21
ZSWIM8-221ENST00000604729 PPARGC1BQ86YN6 1023 aaKnown RBP22.59■■□□□ 1.21
ZSWIM8-221ENST00000604729 POLR3GLQ9BT43 218 aa22.56■■□□□ 1.2
ZSWIM8-221ENST00000604729 NPM1P06748 294 aaKnown RBP eCLIP22.53■■□□□ 1.2
ZSWIM8-221ENST00000604729 ESF1Q9H501 851 aaKnown RBP22.49■■□□□ 1.19
ZSWIM8-221ENST00000604729 ARID3CA6NKF2 412 aa22.48■■□□□ 1.19
ZSWIM8-221ENST00000604729 SCRIBQ14160 1630 aa22.43■■□□□ 1.18
ZSWIM8-221ENST00000604729 CCER1Q8TC90 406 aaPredicted RBP22.42■■□□□ 1.18
ZSWIM8-221ENST00000604729 FAM50AQ14320 339 aaKnown RBP22.25■■□□□ 1.15
ZSWIM8-221ENST00000604729 PELP1Q8IZL8 1130 aaKnown RBP22.23■■□□□ 1.15
ZSWIM8-221ENST00000604729 CNGB1Q14028 1251 aaPredicted RBP22.23■■□□□ 1.15
ZSWIM8-221ENST00000604729 P3H3Q8IVL6 736 aa22.21■■□□□ 1.15
ZSWIM8-221ENST00000604729 RB1CC1Q8TDY2 1594 aa22.2■■□□□ 1.14
ZSWIM8-221ENST00000604729 ERCC6Q03468 1493 aa22.2■■□□□ 1.14
ZSWIM8-221ENST00000604729 TRHP20396 242 aaPredicted RBP22.19■■□□□ 1.14
ZSWIM8-221ENST00000604729 TRIM52Q96A61 297 aa22.18■■□□□ 1.14
ZSWIM8-221ENST00000604729 CCDC180Q9P1Z9 1646 aa22.15■■□□□ 1.14
ZSWIM8-221ENST00000604729 LOC105371045A0A1W2PR82 267 aa22.14■■□□□ 1.13
ZSWIM8-221ENST00000604729 ZNF777Q9ULD5 760 aaPredicted RBP22.13■■□□□ 1.13
ZSWIM8-221ENST00000604729 CHMP7Q8WUX9 453 aaPredicted RBP22.1■■□□□ 1.13
ZSWIM8-221ENST00000604729 STAG3Q9UJ98 1225 aa22.1■■□□□ 1.13
ZSWIM8-221ENST00000604729 ZEB1P37275 1124 aaPredicted RBP22.01■■□□□ 1.11
ZSWIM8-221ENST00000604729 SLC24A1O60721 1099 aa21.97■■□□□ 1.11
ZSWIM8-221ENST00000604729 ZCCHC6Q5VYS8 1495 aaKnown RBP21.92■■□□□ 1.1
ZSWIM8-221ENST00000604729 ARID4BQ4LE39 1312 aaPredicted RBP21.9■■□□□ 1.1
ZSWIM8-221ENST00000604729 CHGAP10645 457 aaKnown RBP21.89■■□□□ 1.09
ZSWIM8-221ENST00000604729 ZNF326Q5BKZ1 582 aaKnown RBP21.89■■□□□ 1.09
ZSWIM8-221ENST00000604729 CDK11AQ9UQ88 783 aaPredicted RBP21.88■■□□□ 1.09
ZSWIM8-221ENST00000604729 TRIM26Q12899 539 aaPredicted RBP21.84■■□□□ 1.09
ZSWIM8-221ENST00000604729 SCAF1Q9H7N4 1312 aaKnown RBP21.82■■□□□ 1.08
ZSWIM8-221ENST00000604729 KCNH8Q96L42 1107 aa21.72■■□□□ 1.07
ZSWIM8-221ENST00000604729 A0A0G2JS52 829 aa21.64■■□□□ 1.05
ZSWIM8-221ENST00000604729 AEBP2Q6ZN18 517 aaPredicted RBP21.64■■□□□ 1.05
ZSWIM8-221ENST00000604729 NEUROD1Q13562 356 aa21.63■■□□□ 1.05
ZSWIM8-221ENST00000604729 YTHDC1Q96MU7 727 aaKnown RBP21.63■■□□□ 1.05
ZSWIM8-221ENST00000604729 C14orf37Q86TY3 774 aa21.62■■□□□ 1.05
ZSWIM8-221ENST00000604729 NACADO15069 1562 aa21.6■■□□□ 1.05
ZSWIM8-221ENST00000604729 SENP3Q9H4L4 574 aaPredicted RBP21.59■■□□□ 1.05
ZSWIM8-221ENST00000604729 PLEKHG5O94827 1062 aa21.59■■□□□ 1.05
ZSWIM8-221ENST00000604729 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.59■■□□□ 1.054e-7■□□□□ 11.3
ZSWIM8-221ENST00000604729 CENPBP07199 599 aaPredicted RBP21.58■■□□□ 1.05
ZSWIM8-221ENST00000604729 NEFLP07196 543 aa21.56■■□□□ 1.04
ZSWIM8-221ENST00000604729 BAZ1BQ9UIG0 1483 aaKnown RBP21.53■■□□□ 1.04
ZSWIM8-221ENST00000604729 ERICH6Q7L0X2 663 aa21.47■■□□□ 1.03
ZSWIM8-221ENST00000604729 ZBTB7CA1YPR0 619 aa21.45■■□□□ 1.02
ZSWIM8-221ENST00000604729 PPP1R15AO75807 674 aaPredicted RBP21.45■■□□□ 1.02
ZSWIM8-221ENST00000604729 HAP1P54257 671 aaPredicted RBP21.45■■□□□ 1.02
ZSWIM8-221ENST00000604729 NEFMP07197 916 aa21.43■■□□□ 1.02
ZSWIM8-221ENST00000604729 CSRNP3Q8WYN3 585 aa21.41■■□□□ 1.02
ZSWIM8-221ENST00000604729 MLECQ14165 292 aa21.3■■□□□ 1
ZSWIM8-221ENST00000604729 BCL11AQ9H165 835 aa21.28■■□□□ 1
ZSWIM8-221ENST00000604729 TSPY4P0CV99 314 aa21.28■■□□□ 1
ZSWIM8-221ENST00000604729 TSPY10P0CW01 314 aa21.28■■□□□ 1
ZSWIM8-221ENST00000604729 PLEKHD1A6NEE1 506 aa21.27■■□□□ 1
ZSWIM8-221ENST00000604729 CHIC2Q9UKJ5 165 aa21.25■□□□□ 0.99
ZSWIM8-221ENST00000604729 CECR2Q9BXF3 1484 aa21.23■□□□□ 0.99
ZSWIM8-221ENST00000604729 MYT1Q01538 1121 aa21.23■□□□□ 0.99
ZSWIM8-221ENST00000604729 HRCP23327 699 aa21.21■□□□□ 0.99
ZSWIM8-221ENST00000604729 ZBTB47Q9UFB7 747 aaPredicted RBP21.17■□□□□ 0.98
ZSWIM8-221ENST00000604729 EIF4G1Q04637 1599 aaKnown RBP21.12■□□□□ 0.97
ZSWIM8-221ENST00000604729 DAXXQ9UER7 740 aaPredicted RBP21.11■□□□□ 0.97
ZSWIM8-221ENST00000604729 CLSPNQ9HAW4 1339 aa21.1■□□□□ 0.97
ZSWIM8-221ENST00000604729 MTUS2Q5JR59 1369 aa21.09■□□□□ 0.97
ZSWIM8-221ENST00000604729 PDS5BQ9NTI5 1447 aa21.08■□□□□ 0.96
ZSWIM8-221ENST00000604729 LMOD2Q6P5Q4 547 aa21.07■□□□□ 0.96
ZSWIM8-221ENST00000604729 CANXP27824 592 aaKnown RBP21.02■□□□□ 0.96
ZSWIM8-221ENST00000604729 NPM2Q86SE8 214 aaKnown RBP21.02■□□□□ 0.96
ZSWIM8-221ENST00000604729 RSF1Q96T23 1441 aaPredicted RBP21.01■□□□□ 0.95
ZSWIM8-221ENST00000604729 CYB5RLQ6IPT4 315 aa20.98■□□□□ 0.95
ZSWIM8-221ENST00000604729 KDM2AQ9Y2K7 1162 aa20.98■□□□□ 0.95
ZSWIM8-221ENST00000604729 CFDP1Q9UEE9 299 aaPredicted RBP20.87■□□□□ 0.93
ZSWIM8-221ENST00000604729 OSCARQ8IYS5 282 aa20.87■□□□□ 0.93
ZSWIM8-221ENST00000604729 ARXQ96QS3 562 aa20.86■□□□□ 0.93
ZSWIM8-221ENST00000604729 BAZ1AQ9NRL2 1556 aaPredicted RBP20.84■□□□□ 0.93
ZSWIM8-221ENST00000604729 KIF27Q86VH2 1401 aa20.83■□□□□ 0.93
ZSWIM8-221ENST00000604729 DCAF1Q9Y4B6 1507 aa20.83■□□□□ 0.93
ZSWIM8-221ENST00000604729 DIEXFQ68CQ4 756 aaKnown RBP20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms