RNA–Protein interactions for RNA: ENST00000601071.1

BRD4-209, Transcript of bromodomain containing 4, humanhuman

TSL 5

Gene BRD4, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-209ENST00000601071 AEBP2Q6ZN18 517 aaPredicted RBP20.01■□□□□ 0.79
BRD4-209ENST00000601071 CHIC1Q5VXU3 224 aa18.76■□□□□ 0.59
BRD4-209ENST00000601071 SENP3Q9H4L4 574 aaPredicted RBP17.24■□□□□ 0.35
BRD4-209ENST00000601071 PHF23Q9BUL5 403 aaPredicted RBP16.89■□□□□ 0.29
BRD4-209ENST00000601071 FOXD1Q16676 465 aa16.07■□□□□ 0.16
BRD4-209ENST00000601071 POTEDQ86YR6 584 aa15.83■□□□□ 0.12
BRD4-209ENST00000601071 MSH5O43196 834 aa15.32■□□□□ 0.04
BRD4-209ENST00000601071 PIAS4Q8N2W9 510 aaPredicted RBP14.89□□□□□ -0.03
BRD4-209ENST00000601071 PPP6R1Q9UPN7 881 aa14.58□□□□□ -0.08
BRD4-209ENST00000601071 PLPPR3Q6T4P5 718 aa14.57□□□□□ -0.08
BRD4-209ENST00000601071 ADRA2BP18089 450 aa14.49□□□□□ -0.09
BRD4-209ENST00000601071 DMRT2Q9Y5R5 561 aa13.57□□□□□ -0.24
BRD4-209ENST00000601071 MAPK8IP2Q13387 824 aaPredicted RBP13.46□□□□□ -0.25
BRD4-209ENST00000601071 CACNB1Q02641 598 aaPredicted RBP13.42□□□□□ -0.26
BRD4-209ENST00000601071 SCAF1Q9H7N4 1312 aaKnown RBP13.36□□□□□ -0.27
BRD4-209ENST00000601071 RNF39Q9H2S5 420 aa13□□□□□ -0.33
BRD4-209ENST00000601071 DCAF8L1A6NGE4 600 aa12.95□□□□□ -0.34
BRD4-209ENST00000601071 HOXD11P31277 338 aaPredicted RBP12.87□□□□□ -0.35
BRD4-209ENST00000601071 C1QBPQ07021 282 aaKnown RBP12.81□□□□□ -0.36
BRD4-209ENST00000601071 PPP4R3CPQ6ZMV5 832 aa12.66□□□□□ -0.38
BRD4-209ENST00000601071 RNF216Q9NWF9 866 aaPredicted RBP12.62□□□□□ -0.39
BRD4-209ENST00000601071 DNAJC5BQ9UF47 199 aa12.62□□□□□ -0.39
BRD4-209ENST00000601071 CNKSR2Q8WXI2 1034 aa12.58□□□□□ -0.4
BRD4-209ENST00000601071 POTEHQ6S545 545 aa12.3□□□□□ -0.44
BRD4-209ENST00000601071 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.21□□□□□ -0.452e-8■■□□□ 13.7
BRD4-209ENST00000601071 NCBP3Q53F19 620 aaKnown RBP12.05□□□□□ -0.48
BRD4-209ENST00000601071 DSG3P32926 999 aa11.97□□□□□ -0.49
BRD4-209ENST00000601071 U3KPZ7 1027 aaPredicted RBP11.9□□□□□ -0.5
BRD4-209ENST00000601071 CAPN15O75808 1086 aa11.87□□□□□ -0.51
BRD4-209ENST00000601071 SPINK5Q9NQ38 1064 aaPredicted RBP11.86□□□□□ -0.51
BRD4-209ENST00000601071 NPM3O75607 178 aaKnown RBP11.83□□□□□ -0.52
BRD4-209ENST00000601071 APLP2Q06481 763 aa11.59□□□□□ -0.55
BRD4-209ENST00000601071 ZNF219Q9P2Y4 722 aaPredicted RBP11.57□□□□□ -0.56
BRD4-209ENST00000601071 TRHP20396 242 aaPredicted RBP11.53□□□□□ -0.56
BRD4-209ENST00000601071 ABCB7O75027 752 aa11.51□□□□□ -0.57
BRD4-209ENST00000601071 RBM42Q9BTD8 480 aaKnown RBP11.49□□□□□ -0.57
BRD4-209ENST00000601071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.44□□□□□ -0.58
BRD4-209ENST00000601071 SLC4A2P04920 1241 aa11.44□□□□□ -0.58
BRD4-209ENST00000601071 HNRNPUL2Q1KMD3 747 aaKnown RBP11.44□□□□□ -0.58
BRD4-209ENST00000601071 CHRDL2Q6WN34 429 aa11.41□□□□□ -0.58
BRD4-209ENST00000601071 NISCHQ9Y2I1 1504 aa11.35□□□□□ -0.59
BRD4-209ENST00000601071 SAMD1Q6SPF0 538 aaPredicted RBP11.33□□□□□ -0.6
BRD4-209ENST00000601071 SP7Q8TDD2 431 aaPredicted RBP11.28□□□□□ -0.6
BRD4-209ENST00000601071 POLA2Q14181 598 aa11.13□□□□□ -0.63
BRD4-209ENST00000601071 KCNA4P22459 653 aa11.09□□□□□ -0.63
BRD4-209ENST00000601071 AKT1S1Q96B36 256 aa11.09□□□□□ -0.63
BRD4-209ENST00000601071 PIP4P2Q8N4L2 257 aa11□□□□□ -0.65
BRD4-209ENST00000601071 MYCNP04198 464 aaPredicted RBP10.99□□□□□ -0.65
BRD4-209ENST00000601071 REM2Q8IYK8 340 aaPredicted RBP10.95□□□□□ -0.66
BRD4-209ENST00000601071 HAX1O00165 279 aa10.94□□□□□ -0.66
BRD4-209ENST00000601071 ZBTB12Q9Y330 459 aaPredicted RBP10.94□□□□□ -0.66
BRD4-209ENST00000601071 FXR2P51116 673 aaKnown RBP eCLIP10.88□□□□□ -0.67
BRD4-209ENST00000601071 PITPNM1O00562 1244 aa10.82□□□□□ -0.68
BRD4-209ENST00000601071 OSCARQ8IYS5 282 aa10.78□□□□□ -0.68
BRD4-209ENST00000601071 EVX2Q03828 476 aa10.74□□□□□ -0.69
BRD4-209ENST00000601071 ATF5Q9Y2D1 282 aaPredicted RBP10.7□□□□□ -0.7
BRD4-209ENST00000601071 FOXD4L1Q9NU39 408 aa10.57□□□□□ -0.72
BRD4-209ENST00000601071 LHX8Q68G74 356 aa10.56□□□□□ -0.72
BRD4-209ENST00000601071 C19orf67A6NJJ6 358 aa10.55□□□□□ -0.72
BRD4-209ENST00000601071 PRKAR2AP13861 404 aaKnown RBP10.54□□□□□ -0.72
BRD4-209ENST00000601071 SPDYE2BA6NHP3 402 aa10.53□□□□□ -0.72
BRD4-209ENST00000601071 SPDYE6P0CI01 402 aa10.53□□□□□ -0.72
BRD4-209ENST00000601071 SPDYE2Q495Y8 402 aa10.53□□□□□ -0.72
BRD4-209ENST00000601071 GABBR2O75899 941 aa10.5□□□□□ -0.73
BRD4-209ENST00000601071 SPDYE1Q8NFV5 336 aaPredicted RBP10.48□□□□□ -0.73
BRD4-209ENST00000601071 CLEC11AQ9Y240 323 aa10.41□□□□□ -0.74
BRD4-209ENST00000601071 FBLN2P98095 1184 aa10.4□□□□□ -0.74
BRD4-209ENST00000601071 ABCC9O60706 1549 aa10.38□□□□□ -0.75
BRD4-209ENST00000601071 SLC4A1APQ9BWU0 796 aaKnown RBP10.38□□□□□ -0.75
BRD4-209ENST00000601071 ATXN8OSP0DMR3 200 aa10.35□□□□□ -0.75
BRD4-209ENST00000601071 SSUH2Q9Y2M2 353 aa10.32□□□□□ -0.76
BRD4-209ENST00000601071 PLSCR2Q9NRY7 297 aa10.29□□□□□ -0.76
BRD4-209ENST00000601071 CLCN6P51797 869 aa10.27□□□□□ -0.77
BRD4-209ENST00000601071 ZNF692Q9BU19 519 aaPredicted RBP10.27□□□□□ -0.77
BRD4-209ENST00000601071 POTEIP0CG38 1075 aa10.26□□□□□ -0.77
BRD4-209ENST00000601071 CHADLQ6NUI6 762 aa10.25□□□□□ -0.77
BRD4-209ENST00000601071 MKRN4PQ13434 485 aaPredicted RBP10.21□□□□□ -0.77
BRD4-209ENST00000601071 PRR29P0C7W0 189 aa10.2□□□□□ -0.78
BRD4-209ENST00000601071 CD44P16070 742 aaKnown RBP10.18□□□□□ -0.78
BRD4-209ENST00000601071 ZBTB22O15209 634 aa10.17□□□□□ -0.78
BRD4-209ENST00000601071 FARP1Q9Y4F1 1045 aaPredicted RBP10.12□□□□□ -0.79
BRD4-209ENST00000601071 DCBLD2Q96PD2 775 aa10.11□□□□□ -0.79
BRD4-209ENST00000601071 PABPN1Q86U42 306 aaKnown RBP eCLIP10.1□□□□□ -0.79
BRD4-209ENST00000601071 CCDC180Q9P1Z9 1646 aa10.09□□□□□ -0.79
BRD4-209ENST00000601071 ZNF579Q8NAF0 562 aaKnown RBP10.03□□□□□ -0.8
BRD4-209ENST00000601071 OTUD5Q96G74 571 aa10□□□□□ -0.81
BRD4-209ENST00000601071 POTEMA6NI47 508 aa9.96□□□□□ -0.82
BRD4-209ENST00000601071 ZRANB1Q9UGI0 708 aa9.94□□□□□ -0.82
BRD4-209ENST00000601071 PCDH10Q9P2E7 1040 aa9.93□□□□□ -0.82
BRD4-209ENST00000601071 POTEGQ6S5H5 508 aa9.92□□□□□ -0.82
BRD4-209ENST00000601071 POTEB2H3BUK9 544 aa9.9□□□□□ -0.82
BRD4-209ENST00000601071 GALR2O43603 387 aaPredicted RBP9.9□□□□□ -0.82
BRD4-209ENST00000601071 CREBZFQ9NS37 354 aa9.82□□□□□ -0.84
BRD4-209ENST00000601071 PAK3O75914 559 aaPredicted RBP9.78□□□□□ -0.84
BRD4-209ENST00000601071 STAG3Q9UJ98 1225 aa9.77□□□□□ -0.85
BRD4-209ENST00000601071 PELP1Q8IZL8 1130 aaKnown RBP9.75□□□□□ -0.85
BRD4-209ENST00000601071 RB1CC1Q8TDY2 1594 aa9.75□□□□□ -0.85
BRD4-209ENST00000601071 PHF12Q96QT6 1004 aa9.73□□□□□ -0.85
BRD4-209ENST00000601071 MAMSTRQ6ZN01 415 aa9.72□□□□□ -0.85
BRD4-209ENST00000601071 C7P10643 843 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms