RNA–Protein interactions for RNA: ENST00000599996.1

AC011455.3-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC011455.3, Length 1,967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011455.3-201ENST00000599996 NISCHQ9Y2I1 1504 aa33.13■■■□□ 2.89
AC011455.3-201ENST00000599996 CCDC180Q9P1Z9 1646 aa28.63■■■□□ 2.17
AC011455.3-201ENST00000599996 ZCCHC6Q5VYS8 1495 aaKnown RBP27.9■■■□□ 2.06
AC011455.3-201ENST00000599996 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
AC011455.3-201ENST00000599996 DCAF8L2P0C7V8 631 aa27.35■■□□□ 1.97
AC011455.3-201ENST00000599996 DCAF1Q9Y4B6 1507 aa27.34■■□□□ 1.97
AC011455.3-201ENST00000599996 ABCC9O60706 1549 aa27.28■■□□□ 1.96
AC011455.3-201ENST00000599996 MYO15BQ96JP2 1530 aa26.83■■□□□ 1.89
AC011455.3-201ENST00000599996 NACADO15069 1562 aa26.63■■□□□ 1.85
AC011455.3-201ENST00000599996 SUPT5HO00267 1087 aaKnown RBP26.62■■□□□ 1.85
AC011455.3-201ENST00000599996 SCRIBQ14160 1630 aa26.49■■□□□ 1.83
AC011455.3-201ENST00000599996 RB1CC1Q8TDY2 1594 aa26.48■■□□□ 1.83
AC011455.3-201ENST00000599996 RSF1Q96T23 1441 aaPredicted RBP25.89■■□□□ 1.74
AC011455.3-201ENST00000599996 UNC13AQ9UPW8 1703 aa25.89■■□□□ 1.74
AC011455.3-201ENST00000599996 CECR2Q9BXF3 1484 aa25.76■■□□□ 1.72
AC011455.3-201ENST00000599996 PABPN1Q86U42 306 aaKnown RBP eCLIP25.71■■□□□ 1.712e-6■■■□□ 16.6
AC011455.3-201ENST00000599996 CHIC1Q5VXU3 224 aa25.69■■□□□ 1.7
AC011455.3-201ENST00000599996 BICRAQ9NZM4 1560 aa25.69■■□□□ 1.7
AC011455.3-201ENST00000599996 MROH2BQ7Z745 1585 aa25.65■■□□□ 1.7
AC011455.3-201ENST00000599996 BAZ1AQ9NRL2 1556 aaPredicted RBP25.53■■□□□ 1.68
AC011455.3-201ENST00000599996 WIZO95785 1651 aa25.47■■□□□ 1.67
AC011455.3-201ENST00000599996 SMARCA4P51532 1647 aa25.38■■□□□ 1.65
AC011455.3-201ENST00000599996 TOP2AP11388 1531 aaKnown RBP25.17■■□□□ 1.62
AC011455.3-201ENST00000599996 PEG3Q9GZU2 1588 aa25.01■■□□□ 1.59
AC011455.3-201ENST00000599996 SMARCA2P51531 1590 aa24.97■■□□□ 1.59
AC011455.3-201ENST00000599996 CCDC88BA6NC98 1476 aa24.97■■□□□ 1.59
AC011455.3-201ENST00000599996 TRIM41Q8WV44 630 aa24.96■■□□□ 1.59
AC011455.3-201ENST00000599996 EIF4G1Q04637 1599 aaKnown RBP24.94■■□□□ 1.58
AC011455.3-201ENST00000599996 ATAD2BQ9ULI0 1458 aa24.86■■□□□ 1.57
AC011455.3-201ENST00000599996 LOC105371045A0A1W2PR82 267 aa24.77■■□□□ 1.56
AC011455.3-201ENST00000599996 BAZ1BQ9UIG0 1483 aaKnown RBP24.75■■□□□ 1.55
AC011455.3-201ENST00000599996 CC2D2AQ9P2K1 1620 aa24.67■■□□□ 1.54
AC011455.3-201ENST00000599996 NCAPD3P42695 1498 aa24.61■■□□□ 1.53
AC011455.3-201ENST00000599996 ABCC8Q09428 1581 aa24.59■■□□□ 1.53
AC011455.3-201ENST00000599996 FAM9AQ8IZU1 332 aaPredicted RBP24.58■■□□□ 1.52
AC011455.3-201ENST00000599996 HMGXB3Q12766 1538 aa24.53■■□□□ 1.52
AC011455.3-201ENST00000599996 DNAJC5BQ9UF47 199 aa24.47■■□□□ 1.51
AC011455.3-201ENST00000599996 WRNQ14191 1432 aaPredicted RBP eCLIP24.35■■□□□ 1.49
AC011455.3-201ENST00000599996 EHMT2Q96KQ7 1210 aa24.26■■□□□ 1.47
AC011455.3-201ENST00000599996 SYNJ1O43426 1573 aa24.24■■□□□ 1.47
AC011455.3-201ENST00000599996 SOGA1O94964 1423 aa24.23■■□□□ 1.47
AC011455.3-201ENST00000599996 EEA1Q15075 1411 aa24.2■■□□□ 1.46
AC011455.3-201ENST00000599996 CFTRP13569 1480 aa24.14■■□□□ 1.45
AC011455.3-201ENST00000599996 RUSC2Q8N2Y8 1516 aa24.13■■□□□ 1.45
AC011455.3-201ENST00000599996 CSRNP3Q8WYN3 585 aa24.09■■□□□ 1.45
AC011455.3-201ENST00000599996 TOP2BQ02880 1626 aa24.08■■□□□ 1.45
AC011455.3-201ENST00000599996 PCGF6Q9BYE7 350 aa24.07■■□□□ 1.44
AC011455.3-201ENST00000599996 BIVM-ERCC5R4GMW8 1640 aa24.04■■□□□ 1.44
AC011455.3-201ENST00000599996 PRDM2Q13029 1718 aa24.01■■□□□ 1.43
AC011455.3-201ENST00000599996 CADPSQ9ULU8 1353 aa23.98■■□□□ 1.43
AC011455.3-201ENST00000599996 CUX1P39880 1505 aa23.94■■□□□ 1.42
AC011455.3-201ENST00000599996 TNIKQ9UKE5 1360 aa23.93■■□□□ 1.42
AC011455.3-201ENST00000599996 TRIM26Q12899 539 aaPredicted RBP23.92■■□□□ 1.42
AC011455.3-201ENST00000599996 GOLGA3Q08378 1498 aa23.91■■□□□ 1.42
AC011455.3-201ENST00000599996 KIF21BO75037 1637 aa23.87■■□□□ 1.41
AC011455.3-201ENST00000599996 CEP164Q9UPV0 1460 aa23.86■■□□□ 1.41
AC011455.3-201ENST00000599996 CEP162Q5TB80 1403 aa23.84■■□□□ 1.41
AC011455.3-201ENST00000599996 UBTFP17480 764 aaKnown RBP23.84■■□□□ 1.41
AC011455.3-201ENST00000599996 NESP48681 1621 aa23.84■■□□□ 1.41
AC011455.3-201ENST00000599996 LAMC3Q9Y6N6 1575 aa23.79■■□□□ 1.4
AC011455.3-201ENST00000599996 FANCD2Q9BXW9 1451 aa23.72■■□□□ 1.39
AC011455.3-201ENST00000599996 HRCP23327 699 aa23.71■■□□□ 1.39
AC011455.3-201ENST00000599996 RAPGEF2Q9Y4G8 1499 aa23.7■■□□□ 1.38
AC011455.3-201ENST00000599996 KIF27Q86VH2 1401 aa23.69■■□□□ 1.38
AC011455.3-201ENST00000599996 PDS5BQ9NTI5 1447 aa23.66■■□□□ 1.38
AC011455.3-201ENST00000599996 PRXQ9BXM0 1461 aa23.64■■□□□ 1.37
AC011455.3-201ENST00000599996 FGD5Q6ZNL6 1462 aa23.62■■□□□ 1.37
AC011455.3-201ENST00000599996 ERICH3Q5RHP9 1530 aa23.61■■□□□ 1.37
AC011455.3-201ENST00000599996 PPARGC1BQ86YN6 1023 aaKnown RBP23.6■■□□□ 1.37
AC011455.3-201ENST00000599996 DNMBPQ6XZF7 1577 aa23.56■■□□□ 1.36
AC011455.3-201ENST00000599996 CLIP1P30622 1438 aa23.56■■□□□ 1.36
AC011455.3-201ENST00000599996 CUX2O14529 1486 aa23.55■■□□□ 1.36
AC011455.3-201ENST00000599996 TOPBP1Q92547 1522 aa23.52■■□□□ 1.36
AC011455.3-201ENST00000599996 KIF21AQ7Z4S6 1674 aa23.5■■□□□ 1.35
AC011455.3-201ENST00000599996 IGF1RP08069 1367 aa23.47■■□□□ 1.35
AC011455.3-201ENST00000599996 ERCC6Q03468 1493 aa23.43■■□□□ 1.34
AC011455.3-201ENST00000599996 POLA1P09884 1462 aaPredicted RBP23.43■■□□□ 1.34
AC011455.3-201ENST00000599996 URB2Q14146 1524 aaKnown RBP23.41■■□□□ 1.34
AC011455.3-201ENST00000599996 RAD54L2Q9Y4B4 1467 aa23.4■■□□□ 1.34
AC011455.3-201ENST00000599996 VPS8Q8N3P4 1428 aa23.4■■□□□ 1.34
AC011455.3-201ENST00000599996 ABCA10Q8WWZ4 1543 aa23.39■■□□□ 1.34
AC011455.3-201ENST00000599996 RANGAP1P46060 587 aaPredicted RBP23.39■■□□□ 1.33
AC011455.3-201ENST00000599996 CARMIL1Q5VZK9 1371 aa23.35■■□□□ 1.33
AC011455.3-201ENST00000599996 MRC2Q9UBG0 1479 aa23.35■■□□□ 1.33
AC011455.3-201ENST00000599996 TTBK1Q5TCY1 1321 aaPredicted RBP23.32■■□□□ 1.32
AC011455.3-201ENST00000599996 ARAP1Q96P48 1450 aa23.28■■□□□ 1.32
AC011455.3-201ENST00000599996 WDR97A6NE52 1622 aa23.26■■□□□ 1.31
AC011455.3-201ENST00000599996 WDR62O43379 1518 aa23.22■■□□□ 1.31
AC011455.3-201ENST00000599996 APLP2Q06481 763 aa23.21■■□□□ 1.31
AC011455.3-201ENST00000599996 THOC2Q8NI27 1593 aaKnown RBP23.21■■□□□ 1.31
AC011455.3-201ENST00000599996 ARHGAP35Q9NRY4 1499 aa23.19■■□□□ 1.3
AC011455.3-201ENST00000599996 CUL7Q14999 1698 aa23.18■■□□□ 1.3
AC011455.3-201ENST00000599996 ZEB1P37275 1124 aaPredicted RBP23.17■■□□□ 1.3
AC011455.3-201ENST00000599996 ABCA5Q8WWZ7 1642 aa23.16■■□□□ 1.3
AC011455.3-201ENST00000599996 TDRD9Q8NDG6 1382 aaKnown RBP23.14■■□□□ 1.29
AC011455.3-201ENST00000599996 GAPVD1Q14C86 1478 aa23.11■■□□□ 1.29
AC011455.3-201ENST00000599996 TARBP1Q13395 1621 aaKnown RBP23.11■■□□□ 1.29
AC011455.3-201ENST00000599996 IFT140Q96RY7 1462 aa23.01■■□□□ 1.27
AC011455.3-201ENST00000599996 CTTNBP2Q8WZ74 1663 aa23.01■■□□□ 1.27
AC011455.3-201ENST00000599996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms