RNA–Protein interactions for RNA: ENST00000596764.5

VAV1-204, Transcript of vav guanine nucleotide exchange factor 1, humanhuman

TSL 2 BASIC

Gene VAV1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV1-204ENST00000596764 NISCHQ9Y2I1 1504 aa40.26■■■■■ 4.04
VAV1-204ENST00000596764 CCDC180Q9P1Z9 1646 aa34.51■■■■□ 3.12
VAV1-204ENST00000596764 ZCCHC6Q5VYS8 1495 aaKnown RBP33.94■■■■□ 3.02
VAV1-204ENST00000596764 SHROOM4Q9ULL8 1493 aa33.85■■■■□ 3.01
VAV1-204ENST00000596764 DCAF8L2P0C7V8 631 aa33.52■■■□□ 2.96
VAV1-204ENST00000596764 DCAF1Q9Y4B6 1507 aa33.04■■■□□ 2.88
VAV1-204ENST00000596764 SUPT5HO00267 1087 aaKnown RBP32.89■■■□□ 2.86
VAV1-204ENST00000596764 ABCC9O60706 1549 aa32.51■■■□□ 2.79
VAV1-204ENST00000596764 MYO15BQ96JP2 1530 aa32.32■■■□□ 2.76
VAV1-204ENST00000596764 SCRIBQ14160 1630 aa32.25■■■□□ 2.75
VAV1-204ENST00000596764 NACADO15069 1562 aa32.06■■■□□ 2.72
VAV1-204ENST00000596764 CHIC1Q5VXU3 224 aa31.68■■■□□ 2.66
VAV1-204ENST00000596764 RB1CC1Q8TDY2 1594 aa31.67■■■□□ 2.66
VAV1-204ENST00000596764 RSF1Q96T23 1441 aaPredicted RBP31.62■■■□□ 2.65
VAV1-204ENST00000596764 CECR2Q9BXF3 1484 aa31.46■■■□□ 2.63
VAV1-204ENST00000596764 MROH2BQ7Z745 1585 aa31.28■■■□□ 2.6
VAV1-204ENST00000596764 UNC13AQ9UPW8 1703 aa31.18■■■□□ 2.58
VAV1-204ENST00000596764 WIZO95785 1651 aa31.06■■■□□ 2.56
VAV1-204ENST00000596764 BAZ1AQ9NRL2 1556 aaPredicted RBP30.96■■■□□ 2.55
VAV1-204ENST00000596764 PABPN1Q86U42 306 aaKnown RBP eCLIP30.96■■■□□ 2.55
VAV1-204ENST00000596764 BICRAQ9NZM4 1560 aa30.85■■■□□ 2.53
VAV1-204ENST00000596764 SMARCA4P51532 1647 aa30.79■■■□□ 2.52
VAV1-204ENST00000596764 LOC105371045A0A1W2PR82 267 aa30.72■■■□□ 2.51
VAV1-204ENST00000596764 TRIM41Q8WV44 630 aa30.68■■■□□ 2.5
VAV1-204ENST00000596764 TOP2AP11388 1531 aaKnown RBP30.57■■■□□ 2.48
VAV1-204ENST00000596764 CCDC88BA6NC98 1476 aa30.43■■■□□ 2.46
VAV1-204ENST00000596764 FAM9AQ8IZU1 332 aaPredicted RBP30.41■■■□□ 2.46
VAV1-204ENST00000596764 SMARCA2P51531 1590 aa30.39■■■□□ 2.46
VAV1-204ENST00000596764 EIF4G1Q04637 1599 aaKnown RBP30.38■■■□□ 2.45
VAV1-204ENST00000596764 PEG3Q9GZU2 1588 aa30.24■■■□□ 2.43
VAV1-204ENST00000596764 EHMT2Q96KQ7 1210 aa30.16■■■□□ 2.42
VAV1-204ENST00000596764 ATAD2BQ9ULI0 1458 aa30.16■■■□□ 2.42
VAV1-204ENST00000596764 ABCC8Q09428 1581 aa30.15■■■□□ 2.42
VAV1-204ENST00000596764 PCGF6Q9BYE7 350 aa30.04■■■□□ 2.4
VAV1-204ENST00000596764 BAZ1BQ9UIG0 1483 aaKnown RBP30.03■■■□□ 2.4
VAV1-204ENST00000596764 SOGA1O94964 1423 aa29.74■■■□□ 2.35
VAV1-204ENST00000596764 WRNQ14191 1432 aaPredicted RBP eCLIP29.72■■■□□ 2.35
VAV1-204ENST00000596764 NCAPD3P42695 1498 aa29.68■■■□□ 2.34
VAV1-204ENST00000596764 RUSC2Q8N2Y8 1516 aa29.64■■■□□ 2.33
VAV1-204ENST00000596764 HMGXB3Q12766 1538 aa29.62■■■□□ 2.33
VAV1-204ENST00000596764 TRIM26Q12899 539 aaPredicted RBP29.6■■■□□ 2.33
VAV1-204ENST00000596764 SYNJ1O43426 1573 aa29.6■■■□□ 2.33
VAV1-204ENST00000596764 HRCP23327 699 aa29.58■■■□□ 2.33
VAV1-204ENST00000596764 CSRNP3Q8WYN3 585 aa29.5■■■□□ 2.31
VAV1-204ENST00000596764 EEA1Q15075 1411 aa29.45■■■□□ 2.31
VAV1-204ENST00000596764 PPARGC1BQ86YN6 1023 aaKnown RBP29.37■■■□□ 2.29
VAV1-204ENST00000596764 UBTFP17480 764 aaKnown RBP29.31■■■□□ 2.28
VAV1-204ENST00000596764 CEP162Q5TB80 1403 aa29.29■■■□□ 2.28
VAV1-204ENST00000596764 TNIKQ9UKE5 1360 aa29.29■■■□□ 2.28
VAV1-204ENST00000596764 TOP2BQ02880 1626 aa29.28■■■□□ 2.28
VAV1-204ENST00000596764 CFTRP13569 1480 aa29.27■■■□□ 2.28
VAV1-204ENST00000596764 CC2D2AQ9P2K1 1620 aa29.27■■■□□ 2.28
VAV1-204ENST00000596764 GOLGA3Q08378 1498 aa29.23■■■□□ 2.27
VAV1-204ENST00000596764 BIVM-ERCC5R4GMW8 1640 aa29.18■■■□□ 2.26
VAV1-204ENST00000596764 CUX1P39880 1505 aa29.16■■■□□ 2.26
VAV1-204ENST00000596764 CEP164Q9UPV0 1460 aa29.14■■■□□ 2.26
VAV1-204ENST00000596764 KIF21BO75037 1637 aa29.09■■■□□ 2.25
VAV1-204ENST00000596764 CADPSQ9ULU8 1353 aa29.06■■■□□ 2.24
VAV1-204ENST00000596764 RAPGEF2Q9Y4G8 1499 aa29.05■■■□□ 2.24
VAV1-204ENST00000596764 TTBK1Q5TCY1 1321 aaPredicted RBP29.03■■■□□ 2.24
VAV1-204ENST00000596764 PRDM2Q13029 1718 aa28.96■■■□□ 2.23
VAV1-204ENST00000596764 RANGAP1P46060 587 aaPredicted RBP28.91■■■□□ 2.22
VAV1-204ENST00000596764 CLIP1P30622 1438 aa28.89■■■□□ 2.21
VAV1-204ENST00000596764 KIF27Q86VH2 1401 aa28.85■■■□□ 2.21
VAV1-204ENST00000596764 PRXQ9BXM0 1461 aa28.84■■■□□ 2.21
VAV1-204ENST00000596764 NESP48681 1621 aa28.79■■■□□ 2.2
VAV1-204ENST00000596764 FANCD2Q9BXW9 1451 aa28.78■■■□□ 2.2
VAV1-204ENST00000596764 DNAJC5BQ9UF47 199 aa28.75■■■□□ 2.19
VAV1-204ENST00000596764 ERICH3Q5RHP9 1530 aa28.75■■■□□ 2.19
VAV1-204ENST00000596764 FGD5Q6ZNL6 1462 aa28.73■■■□□ 2.19
VAV1-204ENST00000596764 CUX2O14529 1486 aa28.72■■■□□ 2.19
VAV1-204ENST00000596764 VPS8Q8N3P4 1428 aa28.67■■■□□ 2.18
VAV1-204ENST00000596764 ZEB1P37275 1124 aaPredicted RBP28.62■■■□□ 2.17
VAV1-204ENST00000596764 IGF1RP08069 1367 aa28.61■■■□□ 2.17
VAV1-204ENST00000596764 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.58■■■□□ 2.17
VAV1-204ENST00000596764 DNMBPQ6XZF7 1577 aa28.53■■■□□ 2.16
VAV1-204ENST00000596764 TOPBP1Q92547 1522 aa28.53■■■□□ 2.16
VAV1-204ENST00000596764 RAD54L2Q9Y4B4 1467 aa28.52■■■□□ 2.16
VAV1-204ENST00000596764 ARAP1Q96P48 1450 aa28.5■■■□□ 2.15
VAV1-204ENST00000596764 LAMC3Q9Y6N6 1575 aa28.5■■■□□ 2.15
VAV1-204ENST00000596764 APLP2Q06481 763 aa28.49■■■□□ 2.15
VAV1-204ENST00000596764 POLA1P09884 1462 aaPredicted RBP28.48■■■□□ 2.15
VAV1-204ENST00000596764 CARMIL1Q5VZK9 1371 aa28.47■■■□□ 2.15
VAV1-204ENST00000596764 CCER1Q8TC90 406 aaPredicted RBP28.44■■■□□ 2.14
VAV1-204ENST00000596764 URB2Q14146 1524 aaKnown RBP28.41■■■□□ 2.14
VAV1-204ENST00000596764 ARHGAP35Q9NRY4 1499 aa28.38■■■□□ 2.13
VAV1-204ENST00000596764 ABCA10Q8WWZ4 1543 aa28.38■■■□□ 2.13
VAV1-204ENST00000596764 PDS5BQ9NTI5 1447 aa28.34■■■□□ 2.13
VAV1-204ENST00000596764 HNRNPUL2Q1KMD3 747 aaKnown RBP28.29■■■□□ 2.12
VAV1-204ENST00000596764 KANK4Q5T7N3 995 aaPredicted RBP28.28■■■□□ 2.12
VAV1-204ENST00000596764 KIF21AQ7Z4S6 1674 aa28.27■■■□□ 2.12
VAV1-204ENST00000596764 TDRD9Q8NDG6 1382 aaKnown RBP28.22■■■□□ 2.11
VAV1-204ENST00000596764 WDR97A6NE52 1622 aa28.16■■■□□ 2.1
VAV1-204ENST00000596764 P3H3Q8IVL6 736 aa28.14■■■□□ 2.09
VAV1-204ENST00000596764 CUL7Q14999 1698 aa28.09■■■□□ 2.09
VAV1-204ENST00000596764 GAPVD1Q14C86 1478 aa28.08■■■□□ 2.08
VAV1-204ENST00000596764 ABCA5Q8WWZ7 1642 aa28.07■■■□□ 2.08
VAV1-204ENST00000596764 TARBP1Q13395 1621 aaKnown RBP27.99■■■□□ 2.07
VAV1-204ENST00000596764 FHOD3Q2V2M9 1422 aa27.99■■■□□ 2.07
VAV1-204ENST00000596764 MRC2Q9UBG0 1479 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms