RNA–Protein interactions for RNA: ENST00000593262.1

RPL27-208, Transcript of ribosomal protein L27, humanhuman

TSL 2

Gene RPL27, Length 1,872 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL27-208ENST00000593262 NISCHQ9Y2I1 1504 aa38.68■■■■□ 3.78
RPL27-208ENST00000593262 SHROOM4Q9ULL8 1493 aa33■■■□□ 2.87
RPL27-208ENST00000593262 ZCCHC6Q5VYS8 1495 aaKnown RBP32.86■■■□□ 2.85
RPL27-208ENST00000593262 CCDC180Q9P1Z9 1646 aa32.86■■■□□ 2.85
RPL27-208ENST00000593262 SUPT5HO00267 1087 aaKnown RBP32.61■■■□□ 2.81
RPL27-208ENST00000593262 CHIC1Q5VXU3 224 aa32.09■■■□□ 2.73
RPL27-208ENST00000593262 MYO15BQ96JP2 1530 aa32.08■■■□□ 2.73
RPL27-208ENST00000593262 HRCP23327 699 aa32.04■■■□□ 2.72
RPL27-208ENST00000593262 DCAF1Q9Y4B6 1507 aa31.92■■■□□ 2.7
RPL27-208ENST00000593262 DCAF8L2P0C7V8 631 aa31.53■■■□□ 2.64
RPL27-208ENST00000593262 PCGF6Q9BYE7 350 aa31.5■■■□□ 2.63
RPL27-208ENST00000593262 ABCC9O60706 1549 aa31.16■■■□□ 2.58
RPL27-208ENST00000593262 PPARGC1BQ86YN6 1023 aaKnown RBP31.01■■■□□ 2.55
RPL27-208ENST00000593262 TRIM26Q12899 539 aaPredicted RBP30.99■■■□□ 2.55
RPL27-208ENST00000593262 LOC105371045A0A1W2PR82 267 aa30.98■■■□□ 2.55
RPL27-208ENST00000593262 RSF1Q96T23 1441 aaPredicted RBP30.72■■■□□ 2.51
RPL27-208ENST00000593262 ZEB1P37275 1124 aaPredicted RBP30.71■■■□□ 2.51
RPL27-208ENST00000593262 RB1CC1Q8TDY2 1594 aa30.62■■■□□ 2.49
RPL27-208ENST00000593262 SCRIBQ14160 1630 aa30.61■■■□□ 2.49
RPL27-208ENST00000593262 TRIM41Q8WV44 630 aa30.48■■■□□ 2.47
RPL27-208ENST00000593262 NACADO15069 1562 aa30.19■■■□□ 2.42
RPL27-208ENST00000593262 PELP1Q8IZL8 1130 aaKnown RBP30.12■■■□□ 2.41
RPL27-208ENST00000593262 FAM9AQ8IZU1 332 aaPredicted RBP30.06■■■□□ 2.4
RPL27-208ENST00000593262 MROH2BQ7Z745 1585 aa30.01■■■□□ 2.39
RPL27-208ENST00000593262 CECR2Q9BXF3 1484 aa29.98■■■□□ 2.39
RPL27-208ENST00000593262 BAZ1AQ9NRL2 1556 aaPredicted RBP29.92■■■□□ 2.38
RPL27-208ENST00000593262 WIZO95785 1651 aa29.89■■■□□ 2.38
RPL27-208ENST00000593262 EIF4G1Q04637 1599 aaKnown RBP29.85■■■□□ 2.37
RPL27-208ENST00000593262 SCAF1Q9H7N4 1312 aaKnown RBP29.72■■■□□ 2.35
RPL27-208ENST00000593262 EHMT2Q96KQ7 1210 aa29.63■■■□□ 2.33
RPL27-208ENST00000593262 WRNQ14191 1432 aaPredicted RBP eCLIP29.59■■■□□ 2.335e-10■■□□□ 13.4
RPL27-208ENST00000593262 TOP2AP11388 1531 aaKnown RBP29.57■■■□□ 2.32
RPL27-208ENST00000593262 CCER1Q8TC90 406 aaPredicted RBP29.53■■■□□ 2.32
RPL27-208ENST00000593262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.44■■■□□ 2.3
RPL27-208ENST00000593262 ACIN1Q9UKV3 1341 aaKnown RBP29.4■■■□□ 2.3
RPL27-208ENST00000593262 SMARCA4P51532 1647 aa29.39■■■□□ 2.3
RPL27-208ENST00000593262 EEA1Q15075 1411 aa29.39■■■□□ 2.29
RPL27-208ENST00000593262 SMARCA2P51531 1590 aa29.36■■■□□ 2.29
RPL27-208ENST00000593262 CEP162Q5TB80 1403 aa29.36■■■□□ 2.29
RPL27-208ENST00000593262 TNIKQ9UKE5 1360 aa29.34■■■□□ 2.29
RPL27-208ENST00000593262 ABCC8Q09428 1581 aa29.33■■■□□ 2.29
RPL27-208ENST00000593262 CCDC88BA6NC98 1476 aa29.32■■■□□ 2.28
RPL27-208ENST00000593262 CENPBP07199 599 aaPredicted RBP29.27■■■□□ 2.28
RPL27-208ENST00000593262 DIEXFQ68CQ4 756 aaKnown RBP29.25■■■□□ 2.27
RPL27-208ENST00000593262 NEUROD1Q13562 356 aa29.17■■■□□ 2.26
RPL27-208ENST00000593262 SOGA1O94964 1423 aa29.13■■■□□ 2.25
RPL27-208ENST00000593262 GOLGA3Q08378 1498 aa29.11■■■□□ 2.25
RPL27-208ENST00000593262 CSRNP3Q8WYN3 585 aa29.08■■■□□ 2.25
RPL27-208ENST00000593262 UNC13AQ9UPW8 1703 aa29.08■■■□□ 2.25
RPL27-208ENST00000593262 ZNF316A6NFI3 1004 aaPredicted RBP28.96■■■□□ 2.23
RPL27-208ENST00000593262 GTF3C3Q9Y5Q9 886 aa28.96■■■□□ 2.23
RPL27-208ENST00000593262 KIF21BO75037 1637 aa28.94■■■□□ 2.22
RPL27-208ENST00000593262 UBTFP17480 764 aaKnown RBP28.93■■■□□ 2.22
RPL27-208ENST00000593262 RUSC2Q8N2Y8 1516 aa28.93■■■□□ 2.22
RPL27-208ENST00000593262 CEP164Q9UPV0 1460 aa28.9■■■□□ 2.22
RPL27-208ENST00000593262 PEG3Q9GZU2 1588 aa28.88■■■□□ 2.21
RPL27-208ENST00000593262 TTBK1Q5TCY1 1321 aaPredicted RBP28.88■■■□□ 2.21
RPL27-208ENST00000593262 MYT1Q01538 1121 aa28.86■■■□□ 2.21
RPL27-208ENST00000593262 BAZ1BQ9UIG0 1483 aaKnown RBP28.77■■■□□ 2.2
RPL27-208ENST00000593262 SYNJ1O43426 1573 aa28.72■■■□□ 2.19
RPL27-208ENST00000593262 CLIP1P30622 1438 aa28.71■■■□□ 2.19
RPL27-208ENST00000593262 VPS8Q8N3P4 1428 aa28.71■■■□□ 2.19
RPL27-208ENST00000593262 BICRAQ9NZM4 1560 aa28.64■■■□□ 2.17
RPL27-208ENST00000593262 APLP2Q06481 763 aa28.53■■■□□ 2.16
RPL27-208ENST00000593262 HNRNPUL2Q1KMD3 747 aaKnown RBP28.52■■■□□ 2.16
RPL27-208ENST00000593262 CLSPNQ9HAW4 1339 aa28.48■■■□□ 2.15
RPL27-208ENST00000593262 MIER1Q8N108 512 aa28.46■■■□□ 2.15
RPL27-208ENST00000593262 RAPGEF2Q9Y4G8 1499 aa28.45■■■□□ 2.14
RPL27-208ENST00000593262 ATAD2BQ9ULI0 1458 aa28.44■■■□□ 2.14
RPL27-208ENST00000593262 YTHDC1Q96MU7 727 aaKnown RBP28.42■■■□□ 2.14
RPL27-208ENST00000593262 TOP2BQ02880 1626 aa28.42■■■□□ 2.14
RPL27-208ENST00000593262 ERICH3Q5RHP9 1530 aa28.39■■■□□ 2.14
RPL27-208ENST00000593262 BIVM-ERCC5R4GMW8 1640 aa28.36■■■□□ 2.13
RPL27-208ENST00000593262 PABPN1Q86U42 306 aaKnown RBP eCLIP28.32■■■□□ 2.12
RPL27-208ENST00000593262 DNAJC5BQ9UF47 199 aa28.3■■■□□ 2.12
RPL27-208ENST00000593262 PRXQ9BXM0 1461 aa28.23■■■□□ 2.11
RPL27-208ENST00000593262 DHX57Q6P158 1386 aaKnown RBP28.22■■■□□ 2.11
RPL27-208ENST00000593262 ARAP1Q96P48 1450 aa28.2■■■□□ 2.11
RPL27-208ENST00000593262 RRBP1Q9P2E9 1410 aaKnown RBP28.13■■■□□ 2.09
RPL27-208ENST00000593262 CUX2O14529 1486 aa28.13■■■□□ 2.09
RPL27-208ENST00000593262 RANGAP1P46060 587 aaPredicted RBP28■■■□□ 2.07
RPL27-208ENST00000593262 HMGXB3Q12766 1538 aa27.98■■■□□ 2.07
RPL27-208ENST00000593262 KIF27Q86VH2 1401 aa27.98■■■□□ 2.07
RPL27-208ENST00000593262 CUX1P39880 1505 aa27.94■■■□□ 2.06
RPL27-208ENST00000593262 KANK4Q5T7N3 995 aaPredicted RBP27.92■■■□□ 2.06
RPL27-208ENST00000593262 CCNB3Q8WWL7 1395 aa27.91■■■□□ 2.06
RPL27-208ENST00000593262 ARHGAP35Q9NRY4 1499 aa27.86■■■□□ 2.05
RPL27-208ENST00000593262 MAP3K1Q13233 1512 aa27.85■■■□□ 2.05
RPL27-208ENST00000593262 NCAPD3P42695 1498 aa27.85■■■□□ 2.05
RPL27-208ENST00000593262 SUPT16HQ9Y5B9 1047 aaKnown RBP27.85■■■□□ 2.05
RPL27-208ENST00000593262 PRDM2Q13029 1718 aa27.76■■■□□ 2.03
RPL27-208ENST00000593262 CFTRP13569 1480 aa27.75■■■□□ 2.03
RPL27-208ENST00000593262 TIAM1Q13009 1591 aa27.74■■■□□ 2.03
RPL27-208ENST00000593262 MAPKBP1O60336 1514 aa27.7■■■□□ 2.02
RPL27-208ENST00000593262 RAB3GAP2Q9H2M9 1393 aa27.68■■■□□ 2.02
RPL27-208ENST00000593262 SETD5Q9C0A6 1442 aa27.62■■■□□ 2.01
RPL27-208ENST00000593262 CFAP43Q8NDM7 1665 aa27.58■■■□□ 2.01
RPL27-208ENST00000593262 LRRC9Q6ZRR7 1453 aa27.58■■■□□ 2.01
RPL27-208ENST00000593262 TIMELESSQ9UNS1 1208 aa27.54■■■□□ 2
RPL27-208ENST00000593262 FHAD1B1AJZ9 1412 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms