RNA–Protein interactions for RNA: ENST00000592170.5

SEH1L-209, Transcript of SEH1 like nucleoporin, humanhuman

TSL 5

Gene SEH1L, Length 787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-209ENST00000592170 AEBP2Q6ZN18 517 aaPredicted RBP29.01■■■□□ 2.23
SEH1L-209ENST00000592170 CHIC1Q5VXU3 224 aa28.24■■■□□ 2.11
SEH1L-209ENST00000592170 PHF23Q9BUL5 403 aaPredicted RBP24.86■■□□□ 1.57
SEH1L-209ENST00000592170 SENP3Q9H4L4 574 aaPredicted RBP24.57■■□□□ 1.52
SEH1L-209ENST00000592170 NISCHQ9Y2I1 1504 aa24.55■■□□□ 1.52
SEH1L-209ENST00000592170 PLPPR3Q6T4P5 718 aa22.86■■□□□ 1.25
SEH1L-209ENST00000592170 FOXD1Q16676 465 aa22.84■■□□□ 1.25
SEH1L-209ENST00000592170 PPP6R1Q9UPN7 881 aa21.95■■□□□ 1.1
SEH1L-209ENST00000592170 ADRA2BP18089 450 aa21.86■■□□□ 1.09
SEH1L-209ENST00000592170 CCDC180Q9P1Z9 1646 aa21.63■■□□□ 1.05
SEH1L-209ENST00000592170 PIAS4Q8N2W9 510 aaPredicted RBP21.45■■□□□ 1.02
SEH1L-209ENST00000592170 ABCC9O60706 1549 aa21.24■□□□□ 0.99
SEH1L-209ENST00000592170 MSH5O43196 834 aa21.06■□□□□ 0.96
SEH1L-209ENST00000592170 ZCCHC6Q5VYS8 1495 aaKnown RBP20.58■□□□□ 0.89
SEH1L-209ENST00000592170 DCAF1Q9Y4B6 1507 aa20.32■□□□□ 0.84
SEH1L-209ENST00000592170 DCAF8L2P0C7V8 631 aa20.25■□□□□ 0.83
SEH1L-209ENST00000592170 DNAJC5BQ9UF47 199 aa20.23■□□□□ 0.83
SEH1L-209ENST00000592170 MYO15BQ96JP2 1530 aa20.2■□□□□ 0.82
SEH1L-209ENST00000592170 NACADO15069 1562 aa20.17■□□□□ 0.82
SEH1L-209ENST00000592170 PPP4R3CPQ6ZMV5 832 aa20.13■□□□□ 0.81
SEH1L-209ENST00000592170 RB1CC1Q8TDY2 1594 aa20.08■□□□□ 0.8
SEH1L-209ENST00000592170 SCAF1Q9H7N4 1312 aaKnown RBP19.98■□□□□ 0.79
SEH1L-209ENST00000592170 MAPK8IP2Q13387 824 aaPredicted RBP19.87■□□□□ 0.77
SEH1L-209ENST00000592170 SCRIBQ14160 1630 aa19.8■□□□□ 0.76
SEH1L-209ENST00000592170 PABPN1Q86U42 306 aaKnown RBP eCLIP19.79■□□□□ 0.76
SEH1L-209ENST00000592170 SHROOM4Q9ULL8 1493 aa19.73■□□□□ 0.75
SEH1L-209ENST00000592170 UNC13AQ9UPW8 1703 aa19.71■□□□□ 0.75
SEH1L-209ENST00000592170 DMRT2Q9Y5R5 561 aa19.64■□□□□ 0.73
SEH1L-209ENST00000592170 CNKSR2Q8WXI2 1034 aa19.6■□□□□ 0.73
SEH1L-209ENST00000592170 KCNA4P22459 653 aa19.58■□□□□ 0.72
SEH1L-209ENST00000592170 NCBP3Q53F19 620 aaKnown RBP19.54■□□□□ 0.72
SEH1L-209ENST00000592170 BICRAQ9NZM4 1560 aa19.48■□□□□ 0.71
SEH1L-209ENST00000592170 NPM3O75607 178 aaKnown RBP19.32■□□□□ 0.68
SEH1L-209ENST00000592170 POTEDQ86YR6 584 aa19.32■□□□□ 0.68
SEH1L-209ENST00000592170 RNF216Q9NWF9 866 aaPredicted RBP19.26■□□□□ 0.67
SEH1L-209ENST00000592170 HOXD11P31277 338 aaPredicted RBP19.24■□□□□ 0.67
SEH1L-209ENST00000592170 CECR2Q9BXF3 1484 aa19.16■□□□□ 0.66
SEH1L-209ENST00000592170 CC2D2AQ9P2K1 1620 aa19.09■□□□□ 0.65
SEH1L-209ENST00000592170 BAZ1AQ9NRL2 1556 aaPredicted RBP18.99■□□□□ 0.63
SEH1L-209ENST00000592170 SMARCA4P51532 1647 aa18.97■□□□□ 0.63
SEH1L-209ENST00000592170 EIF4G1Q04637 1599 aaKnown RBP18.96■□□□□ 0.63
SEH1L-209ENST00000592170 MROH2BQ7Z745 1585 aa18.94■□□□□ 0.62
SEH1L-209ENST00000592170 RSF1Q96T23 1441 aaPredicted RBP18.9■□□□□ 0.62
SEH1L-209ENST00000592170 DNAJC5Q9H3Z4 198 aa18.88■□□□□ 0.61
SEH1L-209ENST00000592170 SUPT5HO00267 1087 aaKnown RBP18.81■□□□□ 0.6
SEH1L-209ENST00000592170 WIZO95785 1651 aa18.8■□□□□ 0.6
SEH1L-209ENST00000592170 PEG3Q9GZU2 1588 aa18.75■□□□□ 0.59
SEH1L-209ENST00000592170 SMARCA2P51531 1590 aa18.71■□□□□ 0.59
SEH1L-209ENST00000592170 ATAD2BQ9ULI0 1458 aa18.69■□□□□ 0.58
SEH1L-209ENST00000592170 TOP2AP11388 1531 aaKnown RBP18.61■□□□□ 0.57
SEH1L-209ENST00000592170 DCAF8L1A6NGE4 600 aa18.61■□□□□ 0.57
SEH1L-209ENST00000592170 SLC4A1APQ9BWU0 796 aaKnown RBP18.59■□□□□ 0.57
SEH1L-209ENST00000592170 HMGXB3Q12766 1538 aa18.58■□□□□ 0.56
SEH1L-209ENST00000592170 NCAPD3P42695 1498 aa18.58■□□□□ 0.56
SEH1L-209ENST00000592170 BAZ1BQ9UIG0 1483 aaKnown RBP18.58■□□□□ 0.56
SEH1L-209ENST00000592170 CUX2O14529 1486 aa18.41■□□□□ 0.54
SEH1L-209ENST00000592170 ERCC6Q03468 1493 aa18.41■□□□□ 0.54
SEH1L-209ENST00000592170 CCDC88BA6NC98 1476 aa18.36■□□□□ 0.53
SEH1L-209ENST00000592170 SLC4A2P04920 1241 aa18.3■□□□□ 0.52
SEH1L-209ENST00000592170 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.18■□□□□ 0.5
SEH1L-209ENST00000592170 PRDM2Q13029 1718 aa18.09■□□□□ 0.49
SEH1L-209ENST00000592170 NESP48681 1621 aa18.09■□□□□ 0.49
SEH1L-209ENST00000592170 RNF39Q9H2S5 420 aa18.09■□□□□ 0.49
SEH1L-209ENST00000592170 CFTRP13569 1480 aa18.08■□□□□ 0.49
SEH1L-209ENST00000592170 ZBTB22O15209 634 aa18.07■□□□□ 0.48
SEH1L-209ENST00000592170 CADPSQ9ULU8 1353 aa18.06■□□□□ 0.48
SEH1L-209ENST00000592170 FOXD4L1Q9NU39 408 aa18.04■□□□□ 0.48
SEH1L-209ENST00000592170 LAMC3Q9Y6N6 1575 aa18.04■□□□□ 0.48
SEH1L-209ENST00000592170 TRIM41Q8WV44 630 aa18.01■□□□□ 0.47
SEH1L-209ENST00000592170 U3KPZ7 1027 aaPredicted RBP17.99■□□□□ 0.47
SEH1L-209ENST00000592170 EHMT2Q96KQ7 1210 aa17.91■□□□□ 0.46
SEH1L-209ENST00000592170 THOC2Q8NI27 1593 aaKnown RBP17.9■□□□□ 0.46
SEH1L-209ENST00000592170 ABCC8Q09428 1581 aa17.89■□□□□ 0.45
SEH1L-209ENST00000592170 PDS5BQ9NTI5 1447 aa17.89■□□□□ 0.45
SEH1L-209ENST00000592170 FANCD2Q9BXW9 1451 aa17.88■□□□□ 0.45
SEH1L-209ENST00000592170 CSRNP3Q8WYN3 585 aa17.88■□□□□ 0.45
SEH1L-209ENST00000592170 KIF21AQ7Z4S6 1674 aa17.87■□□□□ 0.45
SEH1L-209ENST00000592170 C1QBPQ07021 282 aaKnown RBP17.84■□□□□ 0.45
SEH1L-209ENST00000592170 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
SEH1L-209ENST00000592170 MYCNP04198 464 aaPredicted RBP17.82■□□□□ 0.44
SEH1L-209ENST00000592170 WRNQ14191 1432 aaPredicted RBP eCLIP17.81■□□□□ 0.44
SEH1L-209ENST00000592170 SYNJ1O43426 1573 aa17.78■□□□□ 0.44
SEH1L-209ENST00000592170 BIVM-ERCC5R4GMW8 1640 aa17.76■□□□□ 0.43
SEH1L-209ENST00000592170 CUX1P39880 1505 aa17.75■□□□□ 0.43
SEH1L-209ENST00000592170 TOP2BQ02880 1626 aa17.74■□□□□ 0.43
SEH1L-209ENST00000592170 DNMBPQ6XZF7 1577 aa17.71■□□□□ 0.43
SEH1L-209ENST00000592170 MRC2Q9UBG0 1479 aa17.7■□□□□ 0.42
SEH1L-209ENST00000592170 URB2Q14146 1524 aaKnown RBP17.69■□□□□ 0.42
SEH1L-209ENST00000592170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.68■□□□□ 0.42
SEH1L-209ENST00000592170 HNRNPUL2Q1KMD3 747 aaKnown RBP17.68■□□□□ 0.42
SEH1L-209ENST00000592170 TOPBP1Q92547 1522 aa17.67■□□□□ 0.42
SEH1L-209ENST00000592170 OSCARQ8IYS5 282 aa17.64■□□□□ 0.41
SEH1L-209ENST00000592170 SAMD1Q6SPF0 538 aaPredicted RBP17.62■□□□□ 0.41
SEH1L-209ENST00000592170 WDR62O43379 1518 aa17.62■□□□□ 0.41
SEH1L-209ENST00000592170 FGD5Q6ZNL6 1462 aa17.59■□□□□ 0.41
SEH1L-209ENST00000592170 CACNB1Q02641 598 aaPredicted RBP17.56■□□□□ 0.4
SEH1L-209ENST00000592170 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
SEH1L-209ENST00000592170 WDR97A6NE52 1622 aa17.48■□□□□ 0.39
SEH1L-209ENST00000592170 APLP2Q06481 763 aa17.47■□□□□ 0.39
SEH1L-209ENST00000592170 SPINK5Q9NQ38 1064 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms