RNA–Protein interactions for RNA: ENST00000591459.1

ABCA8-214, Transcript of ATP binding cassette subfamily A member 8, humanhuman

Gene ABCA8, Length 3,071 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-214ENST00000591459 NISCHQ9Y2I1 1504 aa21.74■■□□□ 1.07
ABCA8-214ENST00000591459 SHROOM4Q9ULL8 1493 aa19.21■□□□□ 0.67
ABCA8-214ENST00000591459 DCAF8L2P0C7V8 631 aa18.94■□□□□ 0.62
ABCA8-214ENST00000591459 SUPT5HO00267 1087 aaKnown RBP18.8■□□□□ 0.6
ABCA8-214ENST00000591459 ZCCHC6Q5VYS8 1495 aaKnown RBP18.29■□□□□ 0.52
ABCA8-214ENST00000591459 CCDC180Q9P1Z9 1646 aa18.15■□□□□ 0.5
ABCA8-214ENST00000591459 CHIC1Q5VXU3 224 aa17.93■□□□□ 0.46
ABCA8-214ENST00000591459 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
ABCA8-214ENST00000591459 LOC105371045A0A1W2PR82 267 aa17.7■□□□□ 0.42
ABCA8-214ENST00000591459 EHMT2Q96KQ7 1210 aa17.64■□□□□ 0.41
ABCA8-214ENST00000591459 ABCC9O60706 1549 aa17.64■□□□□ 0.41
ABCA8-214ENST00000591459 HRCP23327 699 aa17.61■□□□□ 0.41
ABCA8-214ENST00000591459 SCRIBQ14160 1630 aa17.55■□□□□ 0.4
ABCA8-214ENST00000591459 PCGF6Q9BYE7 350 aa17.54■□□□□ 0.4
ABCA8-214ENST00000591459 PPARGC1BQ86YN6 1023 aaKnown RBP17.53■□□□□ 0.4
ABCA8-214ENST00000591459 FAM9AQ8IZU1 332 aaPredicted RBP17.51■□□□□ 0.39
ABCA8-214ENST00000591459 DCAF1Q9Y4B6 1507 aa17.49■□□□□ 0.39
ABCA8-214ENST00000591459 RSF1Q96T23 1441 aaPredicted RBP17.32■□□□□ 0.36
ABCA8-214ENST00000591459 TRIM41Q8WV44 630 aa17.29■□□□□ 0.36
ABCA8-214ENST00000591459 CECR2Q9BXF3 1484 aa17.25■□□□□ 0.35
ABCA8-214ENST00000591459 RB1CC1Q8TDY2 1594 aa17.13■□□□□ 0.33
ABCA8-214ENST00000591459 PABPN1Q86U42 306 aaKnown RBP eCLIP17.1■□□□□ 0.33
ABCA8-214ENST00000591459 MROH2BQ7Z745 1585 aa17.06■□□□□ 0.32
ABCA8-214ENST00000591459 TTBK1Q5TCY1 1321 aaPredicted RBP16.97■□□□□ 0.31
ABCA8-214ENST00000591459 NACADO15069 1562 aa16.96■□□□□ 0.31
ABCA8-214ENST00000591459 WIZO95785 1651 aa16.94■□□□□ 0.3
ABCA8-214ENST00000591459 TRIM26Q12899 539 aaPredicted RBP16.89■□□□□ 0.29
ABCA8-214ENST00000591459 SCAF1Q9H7N4 1312 aaKnown RBP16.7■□□□□ 0.26
ABCA8-214ENST00000591459 ABCC8Q09428 1581 aa16.68■□□□□ 0.26
ABCA8-214ENST00000591459 RANGAP1P46060 587 aaPredicted RBP16.66■□□□□ 0.26
ABCA8-214ENST00000591459 BAZ1AQ9NRL2 1556 aaPredicted RBP16.63■□□□□ 0.25
ABCA8-214ENST00000591459 CCDC88BA6NC98 1476 aa16.62■□□□□ 0.25
ABCA8-214ENST00000591459 PELP1Q8IZL8 1130 aaKnown RBP16.59■□□□□ 0.25
ABCA8-214ENST00000591459 UBTFP17480 764 aaKnown RBP16.59■□□□□ 0.25
ABCA8-214ENST00000591459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.58■□□□□ 0.24
ABCA8-214ENST00000591459 SOGA1O94964 1423 aa16.56■□□□□ 0.24
ABCA8-214ENST00000591459 SMARCA4P51532 1647 aa16.53■□□□□ 0.24
ABCA8-214ENST00000591459 RUSC2Q8N2Y8 1516 aa16.52■□□□□ 0.24
ABCA8-214ENST00000591459 UNC13AQ9UPW8 1703 aa16.51■□□□□ 0.23
ABCA8-214ENST00000591459 TOP2AP11388 1531 aaKnown RBP16.47■□□□□ 0.23
ABCA8-214ENST00000591459 SMARCA2P51531 1590 aa16.45■□□□□ 0.22
ABCA8-214ENST00000591459 ZEB1P37275 1124 aaPredicted RBP16.44■□□□□ 0.22
ABCA8-214ENST00000591459 CSRNP3Q8WYN3 585 aa16.43■□□□□ 0.22
ABCA8-214ENST00000591459 BICRAQ9NZM4 1560 aa16.42■□□□□ 0.22
ABCA8-214ENST00000591459 CCER1Q8TC90 406 aaPredicted RBP16.42■□□□□ 0.22
ABCA8-214ENST00000591459 EIF4G1Q04637 1599 aaKnown RBP16.37■□□□□ 0.21
ABCA8-214ENST00000591459 CEP162Q5TB80 1403 aa16.32■□□□□ 0.2
ABCA8-214ENST00000591459 NEUROD1Q13562 356 aa16.32■□□□□ 0.2
ABCA8-214ENST00000591459 WRNQ14191 1432 aaPredicted RBP eCLIP16.29■□□□□ 0.2
ABCA8-214ENST00000591459 HNRNPUL2Q1KMD3 747 aaKnown RBP16.27■□□□□ 0.2
ABCA8-214ENST00000591459 ATAD2BQ9ULI0 1458 aa16.25■□□□□ 0.19
ABCA8-214ENST00000591459 ACIN1Q9UKV3 1341 aaKnown RBP16.24■□□□□ 0.19
ABCA8-214ENST00000591459 BAZ1BQ9UIG0 1483 aaKnown RBP16.23■□□□□ 0.19
ABCA8-214ENST00000591459 GTF3C3Q9Y5Q9 886 aa16.22■□□□□ 0.19
ABCA8-214ENST00000591459 TNIKQ9UKE5 1360 aa16.18■□□□□ 0.18
ABCA8-214ENST00000591459 SYNJ1O43426 1573 aa16.16■□□□□ 0.18
ABCA8-214ENST00000591459 GOLGA3Q08378 1498 aa16.09■□□□□ 0.17
ABCA8-214ENST00000591459 APLP2Q06481 763 aa16.08■□□□□ 0.16
ABCA8-214ENST00000591459 DIEXFQ68CQ4 756 aaKnown RBP16.08■□□□□ 0.16
ABCA8-214ENST00000591459 RAPGEF2Q9Y4G8 1499 aa16.07■□□□□ 0.16
ABCA8-214ENST00000591459 CLIP1P30622 1438 aa16.05■□□□□ 0.16
ABCA8-214ENST00000591459 EEA1Q15075 1411 aa16.01■□□□□ 0.15
ABCA8-214ENST00000591459 ITGAEP38570 1179 aa16■□□□□ 0.15
ABCA8-214ENST00000591459 YTHDC1Q96MU7 727 aaKnown RBP16■□□□□ 0.15
ABCA8-214ENST00000591459 PEG3Q9GZU2 1588 aa15.99■□□□□ 0.15
ABCA8-214ENST00000591459 CENPBP07199 599 aaPredicted RBP15.98■□□□□ 0.15
ABCA8-214ENST00000591459 CEP164Q9UPV0 1460 aa15.97■□□□□ 0.15
ABCA8-214ENST00000591459 KANK4Q5T7N3 995 aaPredicted RBP15.95■□□□□ 0.14
ABCA8-214ENST00000591459 P3H3Q8IVL6 736 aa15.93■□□□□ 0.14
ABCA8-214ENST00000591459 ATP1B4Q9UN42 357 aaPredicted RBP15.93■□□□□ 0.14
ABCA8-214ENST00000591459 VPS8Q8N3P4 1428 aa15.85■□□□□ 0.13
ABCA8-214ENST00000591459 DNAJC5BQ9UF47 199 aa15.84■□□□□ 0.13
ABCA8-214ENST00000591459 CUX1P39880 1505 aa15.83■□□□□ 0.12
ABCA8-214ENST00000591459 NCAPD3P42695 1498 aa15.83■□□□□ 0.12
ABCA8-214ENST00000591459 MYT1Q01538 1121 aa15.81■□□□□ 0.12
ABCA8-214ENST00000591459 KIF21BO75037 1637 aa15.8■□□□□ 0.12
ABCA8-214ENST00000591459 TOP2BQ02880 1626 aa15.79■□□□□ 0.12
ABCA8-214ENST00000591459 ZNF316A6NFI3 1004 aaPredicted RBP15.77■□□□□ 0.11
ABCA8-214ENST00000591459 KIF27Q86VH2 1401 aa15.75■□□□□ 0.11
ABCA8-214ENST00000591459 CUX2O14529 1486 aa15.75■□□□□ 0.11
ABCA8-214ENST00000591459 MIER1Q8N108 512 aa15.74■□□□□ 0.11
ABCA8-214ENST00000591459 ARAP1Q96P48 1450 aa15.74■□□□□ 0.11
ABCA8-214ENST00000591459 CFTRP13569 1480 aa15.72■□□□□ 0.11
ABCA8-214ENST00000591459 PRXQ9BXM0 1461 aa15.72■□□□□ 0.11
ABCA8-214ENST00000591459 CADPSQ9ULU8 1353 aa15.68■□□□□ 0.1
ABCA8-214ENST00000591459 IGF1RP08069 1367 aa15.68■□□□□ 0.1
ABCA8-214ENST00000591459 NESP48681 1621 aa15.67■□□□□ 0.1
ABCA8-214ENST00000591459 HMGXB3Q12766 1538 aa15.67■□□□□ 0.1
ABCA8-214ENST00000591459 FAM50AQ14320 339 aaKnown RBP15.66■□□□□ 0.1
ABCA8-214ENST00000591459 RAD54L2Q9Y4B4 1467 aa15.64■□□□□ 0.09
ABCA8-214ENST00000591459 CARMIL1Q5VZK9 1371 aa15.63■□□□□ 0.09
ABCA8-214ENST00000591459 BIVM-ERCC5R4GMW8 1640 aa15.63■□□□□ 0.09
ABCA8-214ENST00000591459 FGD5Q6ZNL6 1462 aa15.62■□□□□ 0.09
ABCA8-214ENST00000591459 ARID3CA6NKF2 412 aa15.61■□□□□ 0.09
ABCA8-214ENST00000591459 ARHGAP35Q9NRY4 1499 aa15.61■□□□□ 0.09
ABCA8-214ENST00000591459 CC2D2AQ9P2K1 1620 aa15.6■□□□□ 0.09
ABCA8-214ENST00000591459 DHX57Q6P158 1386 aaKnown RBP15.55■□□□□ 0.08
ABCA8-214ENST00000591459 TDRD9Q8NDG6 1382 aaKnown RBP15.55■□□□□ 0.08
ABCA8-214ENST00000591459 FANCD2Q9BXW9 1451 aa15.55■□□□□ 0.08
ABCA8-214ENST00000591459 ERICH3Q5RHP9 1530 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms