RNA–Protein interactions for RNA: ENST00000591247.5

LSM12-204, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,484 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-204ENST00000591247 NISCHQ9Y2I1 1504 aa36.83■■■■□ 3.49
LSM12-204ENST00000591247 CCDC180Q9P1Z9 1646 aa31.64■■■□□ 2.66
LSM12-204ENST00000591247 ZCCHC6Q5VYS8 1495 aaKnown RBP31.06■■■□□ 2.56
LSM12-204ENST00000591247 SHROOM4Q9ULL8 1493 aa30.81■■■□□ 2.52
LSM12-204ENST00000591247 DCAF8L2P0C7V8 631 aa30.45■■■□□ 2.47
LSM12-204ENST00000591247 DCAF1Q9Y4B6 1507 aa30.31■■■□□ 2.44
LSM12-204ENST00000591247 SUPT5HO00267 1087 aaKnown RBP29.95■■■□□ 2.38
LSM12-204ENST00000591247 MYO15BQ96JP2 1530 aa29.65■■■□□ 2.34
LSM12-204ENST00000591247 ABCC9O60706 1549 aa29.6■■■□□ 2.33
LSM12-204ENST00000591247 SCRIBQ14160 1630 aa29.43■■■□□ 2.3
LSM12-204ENST00000591247 NACADO15069 1562 aa29.35■■■□□ 2.29
LSM12-204ENST00000591247 CHIC1Q5VXU3 224 aa28.96■■■□□ 2.23
LSM12-204ENST00000591247 RB1CC1Q8TDY2 1594 aa28.95■■■□□ 2.23
LSM12-204ENST00000591247 RSF1Q96T23 1441 aaPredicted RBP28.91■■■□□ 2.22
LSM12-204ENST00000591247 CECR2Q9BXF3 1484 aa28.71■■■□□ 2.19
LSM12-204ENST00000591247 MROH2BQ7Z745 1585 aa28.57■■■□□ 2.16
LSM12-204ENST00000591247 UNC13AQ9UPW8 1703 aa28.53■■■□□ 2.16
LSM12-204ENST00000591247 WIZO95785 1651 aa28.39■■■□□ 2.14
LSM12-204ENST00000591247 BAZ1AQ9NRL2 1556 aaPredicted RBP28.33■■■□□ 2.13
LSM12-204ENST00000591247 BICRAQ9NZM4 1560 aa28.2■■■□□ 2.11
LSM12-204ENST00000591247 SMARCA4P51532 1647 aa28.17■■■□□ 2.1
LSM12-204ENST00000591247 PABPN1Q86U42 306 aaKnown RBP eCLIP28.15■■■□□ 2.1
LSM12-204ENST00000591247 LOC105371045A0A1W2PR82 267 aa28.01■■■□□ 2.07
LSM12-204ENST00000591247 TRIM41Q8WV44 630 aa27.99■■■□□ 2.07
LSM12-204ENST00000591247 TOP2AP11388 1531 aaKnown RBP27.98■■■□□ 2.07
LSM12-204ENST00000591247 EIF4G1Q04637 1599 aaKnown RBP27.85■■■□□ 2.05
LSM12-204ENST00000591247 CCDC88BA6NC98 1476 aa27.81■■■□□ 2.04
LSM12-204ENST00000591247 SMARCA2P51531 1590 aa27.8■■■□□ 2.04
LSM12-204ENST00000591247 PEG3Q9GZU2 1588 aa27.72■■■□□ 2.03
LSM12-204ENST00000591247 FAM9AQ8IZU1 332 aaPredicted RBP27.66■■■□□ 2.02
LSM12-204ENST00000591247 ATAD2BQ9ULI0 1458 aa27.56■■■□□ 2
LSM12-204ENST00000591247 ABCC8Q09428 1581 aa27.52■■■□□ 2
LSM12-204ENST00000591247 BAZ1BQ9UIG0 1483 aaKnown RBP27.43■■□□□ 1.98
LSM12-204ENST00000591247 PCGF6Q9BYE7 350 aa27.41■■□□□ 1.98
LSM12-204ENST00000591247 HRCP23327 699 aa27.4■■□□□ 1.98
LSM12-204ENST00000591247 EHMT2Q96KQ7 1210 aa27.37■■□□□ 1.97
LSM12-204ENST00000591247 SOGA1O94964 1423 aa27.16■■□□□ 1.94
LSM12-204ENST00000591247 WRNQ14191 1432 aaPredicted RBP eCLIP27.15■■□□□ 1.94
LSM12-204ENST00000591247 NCAPD3P42695 1498 aa27.15■■□□□ 1.94
LSM12-204ENST00000591247 HMGXB3Q12766 1538 aa27.12■■□□□ 1.93
LSM12-204ENST00000591247 TRIM26Q12899 539 aaPredicted RBP27.09■■□□□ 1.93
LSM12-204ENST00000591247 SYNJ1O43426 1573 aa27.07■■□□□ 1.92
LSM12-204ENST00000591247 RUSC2Q8N2Y8 1516 aa27.05■■□□□ 1.92
LSM12-204ENST00000591247 EEA1Q15075 1411 aa26.99■■□□□ 1.91
LSM12-204ENST00000591247 CSRNP3Q8WYN3 585 aa26.95■■□□□ 1.9
LSM12-204ENST00000591247 TOP2BQ02880 1626 aa26.81■■□□□ 1.88
LSM12-204ENST00000591247 TNIKQ9UKE5 1360 aa26.81■■□□□ 1.88
LSM12-204ENST00000591247 CEP162Q5TB80 1403 aa26.78■■□□□ 1.88
LSM12-204ENST00000591247 CFTRP13569 1480 aa26.77■■□□□ 1.88
LSM12-204ENST00000591247 GOLGA3Q08378 1498 aa26.74■■□□□ 1.87
LSM12-204ENST00000591247 BIVM-ERCC5R4GMW8 1640 aa26.74■■□□□ 1.87
LSM12-204ENST00000591247 CC2D2AQ9P2K1 1620 aa26.72■■□□□ 1.87
LSM12-204ENST00000591247 UBTFP17480 764 aaKnown RBP26.72■■□□□ 1.87
LSM12-204ENST00000591247 PPARGC1BQ86YN6 1023 aaKnown RBP26.71■■□□□ 1.87
LSM12-204ENST00000591247 KIF21BO75037 1637 aa26.66■■□□□ 1.86
LSM12-204ENST00000591247 CEP164Q9UPV0 1460 aa26.66■■□□□ 1.86
LSM12-204ENST00000591247 CUX1P39880 1505 aa26.65■■□□□ 1.86
LSM12-204ENST00000591247 PRDM2Q13029 1718 aa26.57■■□□□ 1.84
LSM12-204ENST00000591247 CADPSQ9ULU8 1353 aa26.55■■□□□ 1.84
LSM12-204ENST00000591247 RAPGEF2Q9Y4G8 1499 aa26.54■■□□□ 1.84
LSM12-204ENST00000591247 CLIP1P30622 1438 aa26.4■■□□□ 1.82
LSM12-204ENST00000591247 PRXQ9BXM0 1461 aa26.39■■□□□ 1.81
LSM12-204ENST00000591247 KIF27Q86VH2 1401 aa26.36■■□□□ 1.81
LSM12-204ENST00000591247 TTBK1Q5TCY1 1321 aaPredicted RBP26.35■■□□□ 1.81
LSM12-204ENST00000591247 ERICH3Q5RHP9 1530 aa26.34■■□□□ 1.81
LSM12-204ENST00000591247 FANCD2Q9BXW9 1451 aa26.28■■□□□ 1.8
LSM12-204ENST00000591247 RANGAP1P46060 587 aaPredicted RBP26.25■■□□□ 1.79
LSM12-204ENST00000591247 ZEB1P37275 1124 aaPredicted RBP26.24■■□□□ 1.79
LSM12-204ENST00000591247 FGD5Q6ZNL6 1462 aa26.24■■□□□ 1.79
LSM12-204ENST00000591247 NESP48681 1621 aa26.24■■□□□ 1.79
LSM12-204ENST00000591247 VPS8Q8N3P4 1428 aa26.24■■□□□ 1.79
LSM12-204ENST00000591247 CUX2O14529 1486 aa26.21■■□□□ 1.79
LSM12-204ENST00000591247 IGF1RP08069 1367 aa26.14■■□□□ 1.77
LSM12-204ENST00000591247 DNAJC5BQ9UF47 199 aa26.12■■□□□ 1.77
LSM12-204ENST00000591247 DNMBPQ6XZF7 1577 aa26.1■■□□□ 1.77
LSM12-204ENST00000591247 ARAP1Q96P48 1450 aa26.08■■□□□ 1.77
LSM12-204ENST00000591247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.07■■□□□ 1.76
LSM12-204ENST00000591247 LAMC3Q9Y6N6 1575 aa26.07■■□□□ 1.76
LSM12-204ENST00000591247 TOPBP1Q92547 1522 aa26.07■■□□□ 1.76
LSM12-204ENST00000591247 PELP1Q8IZL8 1130 aaKnown RBP26.04■■□□□ 1.76
LSM12-204ENST00000591247 RAD54L2Q9Y4B4 1467 aa26.02■■□□□ 1.76
LSM12-204ENST00000591247 POLA1P09884 1462 aaPredicted RBP26.01■■□□□ 1.76
LSM12-204ENST00000591247 CARMIL1Q5VZK9 1371 aa26■■□□□ 1.75
LSM12-204ENST00000591247 APLP2Q06481 763 aa25.98■■□□□ 1.75
LSM12-204ENST00000591247 ABCA10Q8WWZ4 1543 aa25.96■■□□□ 1.75
LSM12-204ENST00000591247 CCER1Q8TC90 406 aaPredicted RBP25.95■■□□□ 1.75
LSM12-204ENST00000591247 URB2Q14146 1524 aaKnown RBP25.95■■□□□ 1.74
LSM12-204ENST00000591247 ARHGAP35Q9NRY4 1499 aa25.94■■□□□ 1.74
LSM12-204ENST00000591247 PDS5BQ9NTI5 1447 aa25.88■■□□□ 1.73
LSM12-204ENST00000591247 KIF21AQ7Z4S6 1674 aa25.83■■□□□ 1.72
LSM12-204ENST00000591247 KANK4Q5T7N3 995 aaPredicted RBP25.8■■□□□ 1.72
LSM12-204ENST00000591247 WDR97A6NE52 1622 aa25.8■■□□□ 1.72
LSM12-204ENST00000591247 HNRNPUL2Q1KMD3 747 aaKnown RBP25.78■■□□□ 1.72
LSM12-204ENST00000591247 CUL7Q14999 1698 aa25.73■■□□□ 1.71
LSM12-204ENST00000591247 TDRD9Q8NDG6 1382 aaKnown RBP25.71■■□□□ 1.71
LSM12-204ENST00000591247 ABCA5Q8WWZ7 1642 aa25.69■■□□□ 1.7
LSM12-204ENST00000591247 SCAF1Q9H7N4 1312 aaKnown RBP25.67■■□□□ 1.7
LSM12-204ENST00000591247 GAPVD1Q14C86 1478 aa25.64■■□□□ 1.69
LSM12-204ENST00000591247 TARBP1Q13395 1621 aaKnown RBP25.61■■□□□ 1.69
LSM12-204ENST00000591247 P3H3Q8IVL6 736 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms