RNA–Protein interactions for RNA: ENST00000590618.1

COX6B1-203, Transcript of cytochrome c oxidase subunit 6B1, humanhuman

TSL 3

Gene COX6B1, Length 290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6B1-203ENST00000590618 AEBP2Q6ZN18 517 aaPredicted RBP20.12■□□□□ 0.81
COX6B1-203ENST00000590618 CHIC1Q5VXU3 224 aa19.83■□□□□ 0.77
COX6B1-203ENST00000590618 PHF23Q9BUL5 403 aaPredicted RBP17.33■□□□□ 0.36
COX6B1-203ENST00000590618 SENP3Q9H4L4 574 aaPredicted RBP17.27■□□□□ 0.36
COX6B1-203ENST00000590618 NISCHQ9Y2I1 1504 aa16.71■□□□□ 0.27
COX6B1-203ENST00000590618 PLPPR3Q6T4P5 718 aa16.22■□□□□ 0.19
COX6B1-203ENST00000590618 FOXD1Q16676 465 aa15.9■□□□□ 0.14
COX6B1-203ENST00000590618 ADRA2BP18089 450 aa15.31■□□□□ 0.04
COX6B1-203ENST00000590618 PPP6R1Q9UPN7 881 aa15.27■□□□□ 0.04
COX6B1-203ENST00000590618 PIAS4Q8N2W9 510 aaPredicted RBP15.08■□□□□ 0
COX6B1-203ENST00000590618 CCDC180Q9P1Z9 1646 aa14.85□□□□□ -0.03
COX6B1-203ENST00000590618 MSH5O43196 834 aa14.8□□□□□ -0.04
COX6B1-203ENST00000590618 ABCC9O60706 1549 aa14.48□□□□□ -0.09
COX6B1-203ENST00000590618 SCAF1Q9H7N4 1312 aaKnown RBP14.26□□□□□ -0.13
COX6B1-203ENST00000590618 PPP4R3CPQ6ZMV5 832 aa14.23□□□□□ -0.13
COX6B1-203ENST00000590618 DCAF8L2P0C7V8 631 aa14.04□□□□□ -0.16
COX6B1-203ENST00000590618 NCBP3Q53F19 620 aaKnown RBP14.02□□□□□ -0.17
COX6B1-203ENST00000590618 RB1CC1Q8TDY2 1594 aa13.95□□□□□ -0.18
COX6B1-203ENST00000590618 ZCCHC6Q5VYS8 1495 aaKnown RBP13.94□□□□□ -0.18
COX6B1-203ENST00000590618 NACADO15069 1562 aa13.92□□□□□ -0.18
COX6B1-203ENST00000590618 KCNA4P22459 653 aa13.88□□□□□ -0.19
COX6B1-203ENST00000590618 CNKSR2Q8WXI2 1034 aa13.88□□□□□ -0.19
COX6B1-203ENST00000590618 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
COX6B1-203ENST00000590618 MYO15BQ96JP2 1530 aa13.79□□□□□ -0.2
COX6B1-203ENST00000590618 DCAF1Q9Y4B6 1507 aa13.78□□□□□ -0.2
COX6B1-203ENST00000590618 DMRT2Q9Y5R5 561 aa13.73□□□□□ -0.21
COX6B1-203ENST00000590618 UNC13AQ9UPW8 1703 aa13.69□□□□□ -0.22
COX6B1-203ENST00000590618 SCRIBQ14160 1630 aa13.63□□□□□ -0.23
COX6B1-203ENST00000590618 NPM3O75607 178 aaKnown RBP13.62□□□□□ -0.23
COX6B1-203ENST00000590618 RNF216Q9NWF9 866 aaPredicted RBP13.58□□□□□ -0.24
COX6B1-203ENST00000590618 PABPN1Q86U42 306 aaKnown RBP eCLIP13.54□□□□□ -0.24
COX6B1-203ENST00000590618 BICRAQ9NZM4 1560 aa13.48□□□□□ -0.25
COX6B1-203ENST00000590618 HOXD11P31277 338 aaPredicted RBP13.47□□□□□ -0.25
COX6B1-203ENST00000590618 SHROOM4Q9ULL8 1493 aa13.37□□□□□ -0.27
COX6B1-203ENST00000590618 SLC4A1APQ9BWU0 796 aaKnown RBP13.32□□□□□ -0.28
COX6B1-203ENST00000590618 DNAJC5BQ9UF47 199 aa13.29□□□□□ -0.28
COX6B1-203ENST00000590618 POTEDQ86YR6 584 aa13.26□□□□□ -0.29
COX6B1-203ENST00000590618 DCAF8L1A6NGE4 600 aa13.21□□□□□ -0.29
COX6B1-203ENST00000590618 EIF4G1Q04637 1599 aaKnown RBP13.15□□□□□ -0.3
COX6B1-203ENST00000590618 CC2D2AQ9P2K1 1620 aa13.1□□□□□ -0.31
COX6B1-203ENST00000590618 CECR2Q9BXF3 1484 aa13.02□□□□□ -0.33
COX6B1-203ENST00000590618 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
COX6B1-203ENST00000590618 BAZ1AQ9NRL2 1556 aaPredicted RBP12.97□□□□□ -0.33
COX6B1-203ENST00000590618 EHMT2Q96KQ7 1210 aa12.93□□□□□ -0.34
COX6B1-203ENST00000590618 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.92□□□□□ -0.342e-6■□□□□ 9.3
COX6B1-203ENST00000590618 MROH2BQ7Z745 1585 aa12.9□□□□□ -0.34
COX6B1-203ENST00000590618 SMARCA2P51531 1590 aa12.87□□□□□ -0.35
COX6B1-203ENST00000590618 FOXD4L1Q9NU39 408 aa12.86□□□□□ -0.35
COX6B1-203ENST00000590618 ATAD2BQ9ULI0 1458 aa12.85□□□□□ -0.35
COX6B1-203ENST00000590618 WIZO95785 1651 aa12.82□□□□□ -0.36
COX6B1-203ENST00000590618 BAZ1BQ9UIG0 1483 aaKnown RBP12.8□□□□□ -0.36
COX6B1-203ENST00000590618 SLC4A2P04920 1241 aa12.8□□□□□ -0.36
COX6B1-203ENST00000590618 NCAPD3P42695 1498 aa12.79□□□□□ -0.36
COX6B1-203ENST00000590618 HMGXB3Q12766 1538 aa12.79□□□□□ -0.36
COX6B1-203ENST00000590618 PEG3Q9GZU2 1588 aa12.79□□□□□ -0.36
COX6B1-203ENST00000590618 RSF1Q96T23 1441 aaPredicted RBP12.75□□□□□ -0.37
COX6B1-203ENST00000590618 CSRNP3Q8WYN3 585 aa12.73□□□□□ -0.37
COX6B1-203ENST00000590618 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.68□□□□□ -0.38
COX6B1-203ENST00000590618 ZBTB22O15209 634 aa12.68□□□□□ -0.38
COX6B1-203ENST00000590618 MYCNP04198 464 aaPredicted RBP12.68□□□□□ -0.38
COX6B1-203ENST00000590618 HNRNPUL2Q1KMD3 747 aaKnown RBP12.68□□□□□ -0.38
COX6B1-203ENST00000590618 TOP2AP11388 1531 aaKnown RBP12.65□□□□□ -0.38
COX6B1-203ENST00000590618 SUPT5HO00267 1087 aaKnown RBP12.6□□□□□ -0.39
COX6B1-203ENST00000590618 APLP2Q06481 763 aa12.58□□□□□ -0.4
COX6B1-203ENST00000590618 SAMD1Q6SPF0 538 aaPredicted RBP12.58□□□□□ -0.4
COX6B1-203ENST00000590618 RNF39Q9H2S5 420 aa12.58□□□□□ -0.4
COX6B1-203ENST00000590618 U3KPZ7 1027 aaPredicted RBP12.58□□□□□ -0.4
COX6B1-203ENST00000590618 NESP48681 1621 aa12.55□□□□□ -0.4
COX6B1-203ENST00000590618 C1QBPQ07021 282 aaKnown RBP12.54□□□□□ -0.4
COX6B1-203ENST00000590618 ERCC6Q03468 1493 aa12.51□□□□□ -0.41
COX6B1-203ENST00000590618 LAMC3Q9Y6N6 1575 aa12.51□□□□□ -0.41
COX6B1-203ENST00000590618 CCDC88BA6NC98 1476 aa12.48□□□□□ -0.41
COX6B1-203ENST00000590618 ATXN8OSP0DMR3 200 aa12.47□□□□□ -0.41
COX6B1-203ENST00000590618 CADPSQ9ULU8 1353 aa12.45□□□□□ -0.42
COX6B1-203ENST00000590618 KIF21AQ7Z4S6 1674 aa12.45□□□□□ -0.42
COX6B1-203ENST00000590618 PRDM2Q13029 1718 aa12.43□□□□□ -0.42
COX6B1-203ENST00000590618 PDS5BQ9NTI5 1447 aa12.41□□□□□ -0.42
COX6B1-203ENST00000590618 CFTRP13569 1480 aa12.39□□□□□ -0.43
COX6B1-203ENST00000590618 FANCD2Q9BXW9 1451 aa12.35□□□□□ -0.43
COX6B1-203ENST00000590618 CEP164Q9UPV0 1460 aa12.35□□□□□ -0.43
COX6B1-203ENST00000590618 THOC2Q8NI27 1593 aaKnown RBP12.33□□□□□ -0.44
COX6B1-203ENST00000590618 CACNB1Q02641 598 aaPredicted RBP12.31□□□□□ -0.44
COX6B1-203ENST00000590618 MRC2Q9UBG0 1479 aa12.29□□□□□ -0.44
COX6B1-203ENST00000590618 CAPN15O75808 1086 aa12.28□□□□□ -0.44
COX6B1-203ENST00000590618 ZNF219Q9P2Y4 722 aaPredicted RBP12.28□□□□□ -0.44
COX6B1-203ENST00000590618 CUX2O14529 1486 aa12.27□□□□□ -0.45
COX6B1-203ENST00000590618 WDR62O43379 1518 aa12.24□□□□□ -0.45
COX6B1-203ENST00000590618 URB2Q14146 1524 aaKnown RBP12.21□□□□□ -0.45
COX6B1-203ENST00000590618 TRHP20396 242 aaPredicted RBP12.21□□□□□ -0.45
COX6B1-203ENST00000590618 SPINK5Q9NQ38 1064 aaPredicted RBP12.2□□□□□ -0.46
COX6B1-203ENST00000590618 DNMBPQ6XZF7 1577 aa12.17□□□□□ -0.46
COX6B1-203ENST00000590618 TOPBP1Q92547 1522 aa12.16□□□□□ -0.46
COX6B1-203ENST00000590618 ATF5Q9Y2D1 282 aaPredicted RBP12.16□□□□□ -0.46
COX6B1-203ENST00000590618 ABCC8Q09428 1581 aa12.14□□□□□ -0.47
COX6B1-203ENST00000590618 CUX1P39880 1505 aa12.11□□□□□ -0.47
COX6B1-203ENST00000590618 FGD5Q6ZNL6 1462 aa12.07□□□□□ -0.48
COX6B1-203ENST00000590618 WRNQ14191 1432 aaPredicted RBP eCLIP12.06□□□□□ -0.48
COX6B1-203ENST00000590618 POLA1P09884 1462 aaPredicted RBP12.06□□□□□ -0.48
COX6B1-203ENST00000590618 IFT140Q96RY7 1462 aa12.06□□□□□ -0.48
COX6B1-203ENST00000590618 SYNJ1O43426 1573 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms