RNA–Protein interactions for RNA: ENST00000590618.1

COX6B1-203, Transcript of cytochrome c oxidase subunit 6B1, humanhuman

TSL 3

Gene COX6B1, Length 290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6B1-203ENST00000590618 SND1Q7KZF4 910 aaKnown RBP eCLIP7.28□□□□□ -1.245e-30■■□□□ 11.9
COX6B1-203ENST00000590618 PCBP1Q15365 356 aaKnown RBP eCLIP7.68□□□□□ -1.188e-26■■■■■ 107.1
COX6B1-203ENST00000590618 PCBP2Q15366 365 aaKnown RBP eCLIP6.65□□□□□ -1.341e-25■□□□□ 10
COX6B1-203ENST00000590618 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.97□□□□□ -1.292e-22■□□□□ 8.3
COX6B1-203ENST00000590618 YBX3P16989 372 aaKnown RBP eCLIP8.85□□□□□ -0.992e-22■■□□□ 11.8
COX6B1-203ENST00000590618 PABPC4Q13310 644 aaKnown RBP eCLIP8.26□□□□□ -1.092e-17■■■□□ 16.3
COX6B1-203ENST00000590618 RPS3P23396 243 aaKnown RBP eCLIP6.83□□□□□ -1.326e-15■■■■■ 40.6
COX6B1-203ENST00000590618 DDX3XO00571 662 aaKnown RBP eCLIP7.28□□□□□ -1.242e-14■■□□□ 14.3
COX6B1-203ENST00000590618 LARP4Q71RC2 724 aaKnown RBP eCLIP6.48□□□□□ -1.371e-12■■■■■ 35.4
COX6B1-203ENST00000590618 SF3B4Q15427 424 aaKnown RBP eCLIP6.31□□□□□ -1.44e-12■■□□□ 13.6
COX6B1-203ENST00000590618 ZC3H11AO75152 810 aaKnown RBP eCLIP7.66□□□□□ -1.186e-12■□□□□ 10.1
COX6B1-203ENST00000590618 DDX6P26196 483 aaKnown RBP eCLIP7.36□□□□□ -1.232e-9■□□□□ 11
COX6B1-203ENST00000590618 AKAP1Q92667 903 aaKnown RBP eCLIP6.1□□□□□ -1.439e-9■■■□□ 14.9
COX6B1-203ENST00000590618 METAP2P50579 478 aaKnown RBP eCLIP8.12□□□□□ -1.111e-8■■□□□ 12.2
COX6B1-203ENST00000590618 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.47□□□□□ -1.052e-8■□□□□ 9.7
COX6B1-203ENST00000590618 TARDBPQ13148 414 aaKnown RBP eCLIP6.82□□□□□ -1.323e-8■□□□□ 8.8
COX6B1-203ENST00000590618 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.37□□□□□ -1.073e-8■■■□□ 15.3
COX6B1-203ENST00000590618 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.43□□□□□ -1.222e-7■■■■□ 21.8
COX6B1-203ENST00000590618 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.03□□□□□ -0.643e-7■□□□□ 10.5
COX6B1-203ENST00000590618 PTBP1P26599 531 aaKnown RBP eCLIP5.51□□□□□ -1.535e-7■■■■■ 31
COX6B1-203ENST00000590618 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.53□□□□□ -1.25e-7■□□□□ 10.4
COX6B1-203ENST00000590618 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.5□□□□□ -1.211e-6■□□□□ 9.6
COX6B1-203ENST00000590618 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.59□□□□□ -0.711e-6■■■□□ 14.8
COX6B1-203ENST00000590618 NIPBLQ6KC79 2804 aaeCLIP5.65□□□□□ -1.51e-6■■□□□ 12.8
COX6B1-203ENST00000590618 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.08□□□□□ -1.282e-6■□□□□ 8.6
COX6B1-203ENST00000590618 PUM1Q14671 1186 aaKnown RBP eCLIP6.93□□□□□ -1.32e-6■□□□□ 8.9
COX6B1-203ENST00000590618 GPKOWQ92917 476 aaPredicted RBP eCLIP8.08□□□□□ -1.122e-6■■■□□ 14.8
COX6B1-203ENST00000590618 EIF3GO75821 320 aaKnown RBP eCLIP5.17□□□□□ -1.582e-6■■□□□ 12.1
COX6B1-203ENST00000590618 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.92□□□□□ -0.342e-6■□□□□ 9.3
Retrieved 29 of 29 RNA–protein pairs in 7.9 ms