RNA–Protein interactions for RNA: ENST00000589759.1

ATP6V0A1-223, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 3

Gene ATP6V0A1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-223	ENST00000589759	AEBP2	Q6ZN18	517 aa	Predicted RBP	14.74	□□□□□ -0.05
ATP6V0A1-223	ENST00000589759	CHIC1	Q5VXU3	224 aa		13.95	□□□□□ -0.18
ATP6V0A1-223	ENST00000589759	SENP3	Q9H4L4	574 aa	Predicted RBP	12.84	□□□□□ -0.35
ATP6V0A1-223	ENST00000589759	PHF23	Q9BUL5	403 aa	Predicted RBP	12.54	□□□□□ -0.4
ATP6V0A1-223	ENST00000589759	POTED	Q86YR6	584 aa		12.41	□□□□□ -0.42
ATP6V0A1-223	ENST00000589759	FOXD1	Q16676	465 aa		11.96	□□□□□ -0.49
ATP6V0A1-223	ENST00000589759	MSH5	O43196	834 aa		11.58	□□□□□ -0.56
ATP6V0A1-223	ENST00000589759	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.08	□□□□□ -0.64
ATP6V0A1-223	ENST00000589759	PPP6R1	Q9UPN7	881 aa		10.6	□□□□□ -0.71
ATP6V0A1-223	ENST00000589759	ADRA2B	P18089	450 aa		10.57	□□□□□ -0.72
ATP6V0A1-223	ENST00000589759	PLPPR3	Q6T4P5	718 aa		10.46	□□□□□ -0.73
ATP6V0A1-223	ENST00000589759	CACNB1	Q02641	598 aa	Predicted RBP	10.39	□□□□□ -0.75
ATP6V0A1-223	ENST00000589759	DMRT2	Q9Y5R5	561 aa		10.02	□□□□□ -0.81
ATP6V0A1-223	ENST00000589759	MAPK8IP2	Q13387	824 aa	Predicted RBP	9.9	□□□□□ -0.82
ATP6V0A1-223	ENST00000589759	SCAF1	Q9H7N4	1312 aa	Known RBP	9.84	□□□□□ -0.83
ATP6V0A1-223	ENST00000589759	DCAF8L1	A6NGE4	600 aa		9.76	□□□□□ -0.85
ATP6V0A1-223	ENST00000589759	RNF39	Q9H2S5	420 aa		9.74	□□□□□ -0.85
ATP6V0A1-223	ENST00000589759	C1QBP	Q07021	282 aa	Known RBP	9.63	□□□□□ -0.87
ATP6V0A1-223	ENST00000589759	POTEH	Q6S545	545 aa		9.63	□□□□□ -0.87
ATP6V0A1-223	ENST00000589759	HOXD11	P31277	338 aa	Predicted RBP	9.37	□□□□□ -0.91
ATP6V0A1-223	ENST00000589759	PELP1	Q8IZL8	1130 aa	Known RBP	9.24	□□□□□ -0.93
ATP6V0A1-223	ENST00000589759	DNAJC5B	Q9UF47	199 aa		9.23	□□□□□ -0.93
ATP6V0A1-223	ENST00000589759	RNF216	Q9NWF9	866 aa	Predicted RBP	9.14	□□□□□ -0.95
ATP6V0A1-223	ENST00000589759	MYT1	Q01538	1121 aa		9.08	□□□□□ -0.96
ATP6V0A1-223	ENST00000589759	CNKSR2	Q8WXI2	1034 aa		9.06	□□□□□ -0.96
ATP6V0A1-223	ENST00000589759	PPP4R3CP	Q6ZMV5	832 aa		9.04	□□□□□ -0.96
ATP6V0A1-223	ENST00000589759	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	9.03	□□□□□ -0.96	5e-8	■■■■□ 22.1
ATP6V0A1-223	ENST00000589759	NISCH	Q9Y2I1	1504 aa		9	□□□□□ -0.97
ATP6V0A1-223	ENST00000589759	DSG3	P32926	999 aa		8.88	□□□□□ -0.99
ATP6V0A1-223	ENST00000589759	CAPN15	O75808	1086 aa		8.85	□□□□□ -0.99
ATP6V0A1-223	ENST00000589759	HRC	P23327	699 aa		8.78	□□□□□ -1
ATP6V0A1-223	ENST00000589759	SPINK5	Q9NQ38	1064 aa	Predicted RBP	8.72	□□□□□ -1.01
ATP6V0A1-223	ENST00000589759	TTBK1	Q5TCY1	1321 aa	Predicted RBP	8.71	□□□□□ -1.02
ATP6V0A1-223	ENST00000589759	SP7	Q8TDD2	431 aa	Predicted RBP	8.7	□□□□□ -1.02
ATP6V0A1-223	ENST00000589759	CHRDL2	Q6WN34	429 aa		8.64	□□□□□ -1.03
ATP6V0A1-223	ENST00000589759		U3KPZ7	1027 aa	Predicted RBP	8.63	□□□□□ -1.03
ATP6V0A1-223	ENST00000589759	RBM42	Q9BTD8	480 aa	Known RBP	8.61	□□□□□ -1.03
ATP6V0A1-223	ENST00000589759	NCBP3	Q53F19	620 aa	Known RBP	8.58	□□□□□ -1.04
ATP6V0A1-223	ENST00000589759	ABCB7	O75027	752 aa		8.53	□□□□□ -1.04
ATP6V0A1-223	ENST00000589759	TRH	P20396	242 aa	Predicted RBP	8.53	□□□□□ -1.04
ATP6V0A1-223	ENST00000589759	APLP2	Q06481	763 aa		8.52	□□□□□ -1.05
ATP6V0A1-223	ENST00000589759	ZNF219	Q9P2Y4	722 aa	Predicted RBP	8.5	□□□□□ -1.05
ATP6V0A1-223	ENST00000589759	HAX1	O00165	279 aa		8.38	□□□□□ -1.07
ATP6V0A1-223	ENST00000589759	PPARGC1B	Q86YN6	1023 aa	Known RBP	8.36	□□□□□ -1.07
ATP6V0A1-223	ENST00000589759	CCDC180	Q9P1Z9	1646 aa		8.33	□□□□□ -1.08
ATP6V0A1-223	ENST00000589759	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	8.31	□□□□□ -1.08
ATP6V0A1-223	ENST00000589759	NPM3	O75607	178 aa	Known RBP	8.31	□□□□□ -1.08
ATP6V0A1-223	ENST00000589759	HNRNPUL2	Q1KMD3	747 aa	Known RBP	8.31	□□□□□ -1.08
ATP6V0A1-223	ENST00000589759	PLSCR2	Q9NRY7	297 aa		8.3	□□□□□ -1.08
ATP6V0A1-223	ENST00000589759	MYO15B	Q96JP2	1530 aa		8.29	□□□□□ -1.08
ATP6V0A1-223	ENST00000589759	DCAF1	Q9Y4B6	1507 aa		8.26	□□□□□ -1.09
ATP6V0A1-223	ENST00000589759	PIP4P2	Q8N4L2	257 aa		8.24	□□□□□ -1.09
ATP6V0A1-223	ENST00000589759	PCGF6	Q9BYE7	350 aa		8.22	□□□□□ -1.09
ATP6V0A1-223	ENST00000589759	PRKCSH	P14314	528 aa	Predicted RBP	8.21	□□□□□ -1.1
ATP6V0A1-223	ENST00000589759	AKT1S1	Q96B36	256 aa		8.21	□□□□□ -1.1
ATP6V0A1-223	ENST00000589759	ZEB1	P37275	1124 aa	Predicted RBP	8.19	□□□□□ -1.1
ATP6V0A1-223	ENST00000589759	SAMD1	Q6SPF0	538 aa	Predicted RBP	8.19	□□□□□ -1.1
ATP6V0A1-223	ENST00000589759	BCL11A	Q9H165	835 aa		8.19	□□□□□ -1.1
ATP6V0A1-223	ENST00000589759	ACIN1	Q9UKV3	1341 aa	Known RBP	8.18	□□□□□ -1.1
ATP6V0A1-223	ENST00000589759	LHX8	Q68G74	356 aa		8.17	□□□□□ -1.1
ATP6V0A1-223	ENST00000589759	ERICH6	Q7L0X2	663 aa		8.16	□□□□□ -1.1
ATP6V0A1-223	ENST00000589759	CENPB	P07199	599 aa	Predicted RBP	8.15	□□□□□ -1.1
ATP6V0A1-223	ENST00000589759	POLA2	Q14181	598 aa		8.12	□□□□□ -1.11
ATP6V0A1-223	ENST00000589759	REM2	Q8IYK8	340 aa	Predicted RBP	8.1	□□□□□ -1.11
ATP6V0A1-223	ENST00000589759	ABCC9	O60706	1549 aa		8.08	□□□□□ -1.12
ATP6V0A1-223	ENST00000589759	SLC4A2	P04920	1241 aa		8.08	□□□□□ -1.12
ATP6V0A1-223	ENST00000589759	FXR2	P51116	673 aa	Known RBP eCLIP	8.08	□□□□□ -1.12
ATP6V0A1-223	ENST00000589759	FAM9A	Q8IZU1	332 aa	Predicted RBP	8.08	□□□□□ -1.12
ATP6V0A1-223	ENST00000589759	EVX2	Q03828	476 aa		8.06	□□□□□ -1.12
ATP6V0A1-223	ENST00000589759	NEUROD1	Q13562	356 aa		8.05	□□□□□ -1.12
ATP6V0A1-223	ENST00000589759	GTF3C3	Q9Y5Q9	886 aa		8.04	□□□□□ -1.12
ATP6V0A1-223	ENST00000589759	TRIM26	Q12899	539 aa	Predicted RBP	8.02	□□□□□ -1.13
ATP6V0A1-223	ENST00000589759	PITPNM1	O00562	1244 aa		8	□□□□□ -1.13
ATP6V0A1-223	ENST00000589759	ANP32E	Q9BTT0	268 aa		7.97	□□□□□ -1.13
ATP6V0A1-223	ENST00000589759	ZBTB12	Q9Y330	459 aa	Predicted RBP	7.97	□□□□□ -1.13
ATP6V0A1-223	ENST00000589759	GABBR2	O75899	941 aa		7.93	□□□□□ -1.14
ATP6V0A1-223	ENST00000589759	CLSPN	Q9HAW4	1339 aa		7.85	□□□□□ -1.15
ATP6V0A1-223	ENST00000589759	C19orf67	A6NJJ6	358 aa		7.84	□□□□□ -1.15
ATP6V0A1-223	ENST00000589759	OSCAR	Q8IYS5	282 aa		7.84	□□□□□ -1.15
ATP6V0A1-223	ENST00000589759	PRKAR2A	P13861	404 aa	Known RBP	7.83	□□□□□ -1.16
ATP6V0A1-223	ENST00000589759	CSRNP3	Q8WYN3	585 aa		7.8	□□□□□ -1.16
ATP6V0A1-223	ENST00000589759	MYCN	P04198	464 aa	Predicted RBP	7.77	□□□□□ -1.17
ATP6V0A1-223	ENST00000589759	DIEXF	Q68CQ4	756 aa	Known RBP	7.76	□□□□□ -1.17
ATP6V0A1-223	ENST00000589759	POTEM	A6NI47	508 aa		7.73	□□□□□ -1.17
ATP6V0A1-223	ENST00000589759	SUPT5H	O00267	1087 aa	Known RBP	7.72	□□□□□ -1.17
ATP6V0A1-223	ENST00000589759	SLC24A1	O60721	1099 aa		7.72	□□□□□ -1.17
ATP6V0A1-223	ENST00000589759	PCDH10	Q9P2E7	1040 aa		7.72	□□□□□ -1.17
ATP6V0A1-223	ENST00000589759	CLEC11A	Q9Y240	323 aa		7.71	□□□□□ -1.18
ATP6V0A1-223	ENST00000589759	TSHZ2	Q9NRE2	1034 aa		7.7	□□□□□ -1.18
ATP6V0A1-223	ENST00000589759	POTEG	Q6S5H5	508 aa		7.68	□□□□□ -1.18
ATP6V0A1-223	ENST00000589759	SPDYE1	Q8NFV5	336 aa	Predicted RBP	7.68	□□□□□ -1.18
ATP6V0A1-223	ENST00000589759	TRIM41	Q8WV44	630 aa		7.68	□□□□□ -1.18
ATP6V0A1-223	ENST00000589759	RB1CC1	Q8TDY2	1594 aa		7.67	□□□□□ -1.18
ATP6V0A1-223	ENST00000589759	POTEI	P0CG38	1075 aa		7.67	□□□□□ -1.18
ATP6V0A1-223	ENST00000589759	CLCN6	P51797	869 aa		7.67	□□□□□ -1.18
ATP6V0A1-223	ENST00000589759	DCBLD2	Q96PD2	775 aa		7.66	□□□□□ -1.18
ATP6V0A1-223	ENST00000589759	MYT1L	Q9UL68	1186 aa		7.66	□□□□□ -1.18
ATP6V0A1-223	ENST00000589759	UBE2Q2	Q8WVN8	375 aa		7.64	□□□□□ -1.19
ATP6V0A1-223	ENST00000589759	NACAD	O15069	1562 aa		7.63	□□□□□ -1.19
ATP6V0A1-223	ENST00000589759	SPDYE2B	A6NHP3	402 aa		7.62	□□□□□ -1.19

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