RNA–Protein interactions for RNA: ENST00000589222.5

BCAS3-222, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BCAS3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-222ENST00000589222 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
BCAS3-222ENST00000589222 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
BCAS3-222ENST00000589222 SHROOM4Q9ULL8 1493 aa21.84■■□□□ 1.09
BCAS3-222ENST00000589222 SUPT5HO00267 1087 aaKnown RBP21.59■■□□□ 1.05
BCAS3-222ENST00000589222 EHMT2Q96KQ7 1210 aa20.57■□□□□ 0.88
BCAS3-222ENST00000589222 FAM9AQ8IZU1 332 aaPredicted RBP20.21■□□□□ 0.83
BCAS3-222ENST00000589222 PCGF6Q9BYE7 350 aa20.2■□□□□ 0.82
BCAS3-222ENST00000589222 CHIC1Q5VXU3 224 aa20.16■□□□□ 0.82
BCAS3-222ENST00000589222 LOC105371045A0A1W2PR82 267 aa20.11■□□□□ 0.81
BCAS3-222ENST00000589222 ZCCHC6Q5VYS8 1495 aaKnown RBP19.87■□□□□ 0.77
BCAS3-222ENST00000589222 TTBK1Q5TCY1 1321 aaPredicted RBP19.78■□□□□ 0.76
BCAS3-222ENST00000589222 PPARGC1BQ86YN6 1023 aaKnown RBP19.77■□□□□ 0.76
BCAS3-222ENST00000589222 TRIM41Q8WV44 630 aa19.75■□□□□ 0.75
BCAS3-222ENST00000589222 MYO15BQ96JP2 1530 aa19.68■□□□□ 0.74
BCAS3-222ENST00000589222 ABCC9O60706 1549 aa19.65■□□□□ 0.74
BCAS3-222ENST00000589222 HRCP23327 699 aa19.51■□□□□ 0.71
BCAS3-222ENST00000589222 CCDC180Q9P1Z9 1646 aa19.45■□□□□ 0.7
BCAS3-222ENST00000589222 RANGAP1P46060 587 aaPredicted RBP19.4■□□□□ 0.7
BCAS3-222ENST00000589222 SCRIBQ14160 1630 aa19.34■□□□□ 0.69
BCAS3-222ENST00000589222 PABPN1Q86U42 306 aaKnown RBP eCLIP19.32■□□□□ 0.68
BCAS3-222ENST00000589222 TRIM26Q12899 539 aaPredicted RBP19.24■□□□□ 0.67
BCAS3-222ENST00000589222 UBTFP17480 764 aaKnown RBP19.11■□□□□ 0.65
BCAS3-222ENST00000589222 RSF1Q96T23 1441 aaPredicted RBP19.07■□□□□ 0.64
BCAS3-222ENST00000589222 CCER1Q8TC90 406 aaPredicted RBP19.01■□□□□ 0.63
BCAS3-222ENST00000589222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.01■□□□□ 0.63
BCAS3-222ENST00000589222 CECR2Q9BXF3 1484 aa18.97■□□□□ 0.63
BCAS3-222ENST00000589222 DCAF1Q9Y4B6 1507 aa18.8■□□□□ 0.6
BCAS3-222ENST00000589222 RB1CC1Q8TDY2 1594 aa18.76■□□□□ 0.59
BCAS3-222ENST00000589222 HNRNPUL2Q1KMD3 747 aaKnown RBP18.76■□□□□ 0.59
BCAS3-222ENST00000589222 APLP2Q06481 763 aa18.73■□□□□ 0.59
BCAS3-222ENST00000589222 ZEB1P37275 1124 aaPredicted RBP18.71■□□□□ 0.59
BCAS3-222ENST00000589222 MROH2BQ7Z745 1585 aa18.68■□□□□ 0.58
BCAS3-222ENST00000589222 YTHDC1Q96MU7 727 aaKnown RBP18.6■□□□□ 0.57
BCAS3-222ENST00000589222 ATP1B4Q9UN42 357 aaPredicted RBP18.6■□□□□ 0.57
BCAS3-222ENST00000589222 ITGAEP38570 1179 aa18.57■□□□□ 0.56
BCAS3-222ENST00000589222 CSRNP3Q8WYN3 585 aa18.54■□□□□ 0.56
BCAS3-222ENST00000589222 WIZO95785 1651 aa18.49■□□□□ 0.55
BCAS3-222ENST00000589222 NACADO15069 1562 aa18.45■□□□□ 0.54
BCAS3-222ENST00000589222 ABCC8Q09428 1581 aa18.42■□□□□ 0.54
BCAS3-222ENST00000589222 SOGA1O94964 1423 aa18.4■□□□□ 0.54
BCAS3-222ENST00000589222 CCDC88BA6NC98 1476 aa18.35■□□□□ 0.53
BCAS3-222ENST00000589222 DIEXFQ68CQ4 756 aaKnown RBP18.35■□□□□ 0.53
BCAS3-222ENST00000589222 P3H3Q8IVL6 736 aa18.26■□□□□ 0.51
BCAS3-222ENST00000589222 RUSC2Q8N2Y8 1516 aa18.25■□□□□ 0.51
BCAS3-222ENST00000589222 CEP162Q5TB80 1403 aa18.23■□□□□ 0.51
BCAS3-222ENST00000589222 BAZ1AQ9NRL2 1556 aaPredicted RBP18.22■□□□□ 0.51
BCAS3-222ENST00000589222 CENPBP07199 599 aaPredicted RBP18.14■□□□□ 0.49
BCAS3-222ENST00000589222 WRNQ14191 1432 aaPredicted RBP eCLIP18.12■□□□□ 0.49
BCAS3-222ENST00000589222 SCAF1Q9H7N4 1312 aaKnown RBP18.12■□□□□ 0.49
BCAS3-222ENST00000589222 NEUROD1Q13562 356 aa18.08■□□□□ 0.48
BCAS3-222ENST00000589222 GTF3C3Q9Y5Q9 886 aa18.07■□□□□ 0.48
BCAS3-222ENST00000589222 FAM50AQ14320 339 aaKnown RBP18.04■□□□□ 0.48
BCAS3-222ENST00000589222 CLIP1P30622 1438 aa18.02■□□□□ 0.47
BCAS3-222ENST00000589222 ZNF316A6NFI3 1004 aaPredicted RBP18.02■□□□□ 0.47
BCAS3-222ENST00000589222 ARID3CA6NKF2 412 aa18.02■□□□□ 0.47
BCAS3-222ENST00000589222 TNIKQ9UKE5 1360 aa18■□□□□ 0.47
BCAS3-222ENST00000589222 BAZ1BQ9UIG0 1483 aaKnown RBP17.98■□□□□ 0.47
BCAS3-222ENST00000589222 SMARCA4P51532 1647 aa17.96■□□□□ 0.47
BCAS3-222ENST00000589222 TOP2AP11388 1531 aaKnown RBP17.95■□□□□ 0.46
BCAS3-222ENST00000589222 ACIN1Q9UKV3 1341 aaKnown RBP17.94■□□□□ 0.46
BCAS3-222ENST00000589222 MIER1Q8N108 512 aa17.92■□□□□ 0.46
BCAS3-222ENST00000589222 GOLGA3Q08378 1498 aa17.92■□□□□ 0.46
BCAS3-222ENST00000589222 KANK4Q5T7N3 995 aaPredicted RBP17.91■□□□□ 0.46
BCAS3-222ENST00000589222 SMARCA2P51531 1590 aa17.89■□□□□ 0.45
BCAS3-222ENST00000589222 CNGB1Q14028 1251 aaPredicted RBP17.87■□□□□ 0.45
BCAS3-222ENST00000589222 HIRIP3Q9BW71 556 aaPredicted RBP17.85■□□□□ 0.45
BCAS3-222ENST00000589222 RAPGEF2Q9Y4G8 1499 aa17.81■□□□□ 0.44
BCAS3-222ENST00000589222 ATAD2BQ9ULI0 1458 aa17.8■□□□□ 0.44
BCAS3-222ENST00000589222 CEP164Q9UPV0 1460 aa17.77■□□□□ 0.44
BCAS3-222ENST00000589222 EEA1Q15075 1411 aa17.77■□□□□ 0.43
BCAS3-222ENST00000589222 PELP1Q8IZL8 1130 aaKnown RBP17.73■□□□□ 0.43
BCAS3-222ENST00000589222 BCANQ96GW7 911 aa17.67■□□□□ 0.42
BCAS3-222ENST00000589222 SIN3AQ96ST3 1273 aa17.65■□□□□ 0.42
BCAS3-222ENST00000589222 SYNJ1O43426 1573 aa17.63■□□□□ 0.41
BCAS3-222ENST00000589222 VPS8Q8N3P4 1428 aa17.63■□□□□ 0.41
BCAS3-222ENST00000589222 CHIC2Q9UKJ5 165 aa17.63■□□□□ 0.41
BCAS3-222ENST00000589222 DDX10Q13206 875 aaKnown RBP17.62■□□□□ 0.41
BCAS3-222ENST00000589222 BICRAQ9NZM4 1560 aa17.62■□□□□ 0.41
BCAS3-222ENST00000589222 FBLN2P98095 1184 aa17.62■□□□□ 0.41
BCAS3-222ENST00000589222 POLR3GLQ9BT43 218 aa17.62■□□□□ 0.41
BCAS3-222ENST00000589222 TRIM52Q96A61 297 aa17.6■□□□□ 0.41
BCAS3-222ENST00000589222 KIF27Q86VH2 1401 aa17.6■□□□□ 0.41
BCAS3-222ENST00000589222 CUX2O14529 1486 aa17.58■□□□□ 0.4
BCAS3-222ENST00000589222 UNC13AQ9UPW8 1703 aa17.54■□□□□ 0.4
BCAS3-222ENST00000589222 DNAJC5BQ9UF47 199 aa17.52■□□□□ 0.39
BCAS3-222ENST00000589222 CARMIL1Q5VZK9 1371 aa17.49■□□□□ 0.39
BCAS3-222ENST00000589222 KCNH8Q96L42 1107 aa17.47■□□□□ 0.39
BCAS3-222ENST00000589222 RRP7BPQ9NSQ0 103 aa17.47■□□□□ 0.39
BCAS3-222ENST00000589222 ZNF326Q5BKZ1 582 aaKnown RBP17.45■□□□□ 0.38
BCAS3-222ENST00000589222 TDRD9Q8NDG6 1382 aaKnown RBP17.45■□□□□ 0.38
BCAS3-222ENST00000589222 CCNB3Q8WWL7 1395 aa17.43■□□□□ 0.38
BCAS3-222ENST00000589222 EIF4G1Q04637 1599 aaKnown RBP17.43■□□□□ 0.38
BCAS3-222ENST00000589222 SENP3-EIF4A1A0A087X0R7 540 aa17.42■□□□□ 0.38
BCAS3-222ENST00000589222 ZNF777Q9ULD5 760 aaPredicted RBP17.42■□□□□ 0.38
BCAS3-222ENST00000589222 KIF21BO75037 1637 aa17.4■□□□□ 0.38
BCAS3-222ENST00000589222 ARAP1Q96P48 1450 aa17.38■□□□□ 0.37
BCAS3-222ENST00000589222 IGF1RP08069 1367 aa17.36■□□□□ 0.37
BCAS3-222ENST00000589222 MTUS2Q5JR59 1369 aa17.36■□□□□ 0.37
BCAS3-222ENST00000589222 DHX57Q6P158 1386 aaKnown RBP17.36■□□□□ 0.37
BCAS3-222ENST00000589222 CADPSQ9ULU8 1353 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms