RNA–Protein interactions for RNA: ENST00000588649.6

POLRMT-202, Transcript of RNA polymerase mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLRMT, Length 3,835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLRMT-202ENST00000588649 NISCHQ9Y2I1 1504 aa29.42■■■□□ 2.3
POLRMT-202ENST00000588649 DCAF8L2P0C7V8 631 aa27.16■■□□□ 1.94
POLRMT-202ENST00000588649 SHROOM4Q9ULL8 1493 aa26.49■■□□□ 1.83
POLRMT-202ENST00000588649 SUPT5HO00267 1087 aaKnown RBP25.98■■□□□ 1.75
POLRMT-202ENST00000588649 ABCC9O60706 1549 aa24.91■■□□□ 1.58
POLRMT-202ENST00000588649 EHMT2Q96KQ7 1210 aa24.7■■□□□ 1.54
POLRMT-202ENST00000588649 ZCCHC6Q5VYS8 1495 aaKnown RBP24.53■■□□□ 1.52
POLRMT-202ENST00000588649 CCDC180Q9P1Z9 1646 aa24.45■■□□□ 1.5
POLRMT-202ENST00000588649 FAM9AQ8IZU1 332 aaPredicted RBP24.32■■□□□ 1.48
POLRMT-202ENST00000588649 PABPN1Q86U42 306 aaKnown RBP eCLIP24.31■■□□□ 1.487e-7■□□□□ 10.4
POLRMT-202ENST00000588649 CHIC1Q5VXU3 224 aa24.04■■□□□ 1.44
POLRMT-202ENST00000588649 SCRIBQ14160 1630 aa24.04■■□□□ 1.44
POLRMT-202ENST00000588649 LOC105371045A0A1W2PR82 267 aa23.89■■□□□ 1.41
POLRMT-202ENST00000588649 TRIM41Q8WV44 630 aa23.88■■□□□ 1.41
POLRMT-202ENST00000588649 TTBK1Q5TCY1 1321 aaPredicted RBP23.62■■□□□ 1.37
POLRMT-202ENST00000588649 RANGAP1P46060 587 aaPredicted RBP23.56■■□□□ 1.36
POLRMT-202ENST00000588649 PCGF6Q9BYE7 350 aa23.52■■□□□ 1.36
POLRMT-202ENST00000588649 PPARGC1BQ86YN6 1023 aaKnown RBP23.51■■□□□ 1.35
POLRMT-202ENST00000588649 CECR2Q9BXF3 1484 aa23.44■■□□□ 1.34
POLRMT-202ENST00000588649 DCAF1Q9Y4B6 1507 aa23.41■■□□□ 1.34
POLRMT-202ENST00000588649 RSF1Q96T23 1441 aaPredicted RBP23.38■■□□□ 1.33
POLRMT-202ENST00000588649 NACADO15069 1562 aa23.28■■□□□ 1.32
POLRMT-202ENST00000588649 RB1CC1Q8TDY2 1594 aa23.25■■□□□ 1.31
POLRMT-202ENST00000588649 MYO15BQ96JP2 1530 aa23.24■■□□□ 1.31
POLRMT-202ENST00000588649 UBTFP17480 764 aaKnown RBP23.17■■□□□ 1.3
POLRMT-202ENST00000588649 PELP1Q8IZL8 1130 aaKnown RBP23.08■■□□□ 1.29
POLRMT-202ENST00000588649 MROH2BQ7Z745 1585 aa23.06■■□□□ 1.28
POLRMT-202ENST00000588649 WIZO95785 1651 aa22.8■■□□□ 1.24
POLRMT-202ENST00000588649 ATP1B4Q9UN42 357 aaPredicted RBP22.73■■□□□ 1.23
POLRMT-202ENST00000588649 HRCP23327 699 aa22.7■■□□□ 1.22
POLRMT-202ENST00000588649 APLP2Q06481 763 aa22.66■■□□□ 1.22
POLRMT-202ENST00000588649 BAZ1AQ9NRL2 1556 aaPredicted RBP22.66■■□□□ 1.22
POLRMT-202ENST00000588649 TRIM26Q12899 539 aaPredicted RBP22.59■■□□□ 1.21
POLRMT-202ENST00000588649 CSRNP3Q8WYN3 585 aa22.56■■□□□ 1.2
POLRMT-202ENST00000588649 CCDC88BA6NC98 1476 aa22.55■■□□□ 1.2
POLRMT-202ENST00000588649 ABCC8Q09428 1581 aa22.48■■□□□ 1.19
POLRMT-202ENST00000588649 BAZ1BQ9UIG0 1483 aaKnown RBP22.48■■□□□ 1.19
POLRMT-202ENST00000588649 MYT1Q01538 1121 aa22.39■■□□□ 1.18
POLRMT-202ENST00000588649 CCER1Q8TC90 406 aaPredicted RBP22.39■■□□□ 1.18
POLRMT-202ENST00000588649 HNRNPUL2Q1KMD3 747 aaKnown RBP22.38■■□□□ 1.17
POLRMT-202ENST00000588649 SOGA1O94964 1423 aa22.37■■□□□ 1.17
POLRMT-202ENST00000588649 SMARCA4P51532 1647 aa22.36■■□□□ 1.17
POLRMT-202ENST00000588649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.36■■□□□ 1.17
POLRMT-202ENST00000588649 ITGAEP38570 1179 aa22.36■■□□□ 1.17
POLRMT-202ENST00000588649 P3H3Q8IVL6 736 aa22.35■■□□□ 1.17
POLRMT-202ENST00000588649 ATAD2BQ9ULI0 1458 aa22.28■■□□□ 1.16
POLRMT-202ENST00000588649 WRNQ14191 1432 aaPredicted RBP eCLIP22.26■■□□□ 1.15
POLRMT-202ENST00000588649 BICRAQ9NZM4 1560 aa22.25■■□□□ 1.15
POLRMT-202ENST00000588649 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
POLRMT-202ENST00000588649 DNAJC5BQ9UF47 199 aa22.21■■□□□ 1.15
POLRMT-202ENST00000588649 RUSC2Q8N2Y8 1516 aa22.18■■□□□ 1.14
POLRMT-202ENST00000588649 ARID3CA6NKF2 412 aa22.14■■□□□ 1.13
POLRMT-202ENST00000588649 UNC13AQ9UPW8 1703 aa22.12■■□□□ 1.13
POLRMT-202ENST00000588649 SMARCA2P51531 1590 aa22.08■■□□□ 1.13
POLRMT-202ENST00000588649 FBLN2P98095 1184 aa22.08■■□□□ 1.12
POLRMT-202ENST00000588649 CEP162Q5TB80 1403 aa21.95■■□□□ 1.1
POLRMT-202ENST00000588649 EIF4G1Q04637 1599 aaKnown RBP21.95■■□□□ 1.1
POLRMT-202ENST00000588649 SCAF1Q9H7N4 1312 aaKnown RBP21.93■■□□□ 1.1
POLRMT-202ENST00000588649 FAM50AQ14320 339 aaKnown RBP21.84■■□□□ 1.09
POLRMT-202ENST00000588649 CLIP1P30622 1438 aa21.83■■□□□ 1.08
POLRMT-202ENST00000588649 ZEB1P37275 1124 aaPredicted RBP21.8■■□□□ 1.08
POLRMT-202ENST00000588649 CADPSQ9ULU8 1353 aa21.78■■□□□ 1.08
POLRMT-202ENST00000588649 GOLGA3Q08378 1498 aa21.76■■□□□ 1.07
POLRMT-202ENST00000588649 TNIKQ9UKE5 1360 aa21.76■■□□□ 1.07
POLRMT-202ENST00000588649 NCAPD3P42695 1498 aa21.75■■□□□ 1.07
POLRMT-202ENST00000588649 CUX2O14529 1486 aa21.74■■□□□ 1.07
POLRMT-202ENST00000588649 TDRD9Q8NDG6 1382 aaKnown RBP21.72■■□□□ 1.07
POLRMT-202ENST00000588649 NESP48681 1621 aa21.72■■□□□ 1.07
POLRMT-202ENST00000588649 KIF27Q86VH2 1401 aa21.7■■□□□ 1.06
POLRMT-202ENST00000588649 RAPGEF2Q9Y4G8 1499 aa21.7■■□□□ 1.06
POLRMT-202ENST00000588649 EEA1Q15075 1411 aa21.66■■□□□ 1.06
POLRMT-202ENST00000588649 SYNJ1O43426 1573 aa21.64■■□□□ 1.06
POLRMT-202ENST00000588649 CEP164Q9UPV0 1460 aa21.64■■□□□ 1.06
POLRMT-202ENST00000588649 CC2D2AQ9P2K1 1620 aa21.63■■□□□ 1.05
POLRMT-202ENST00000588649 KANK4Q5T7N3 995 aaPredicted RBP21.61■■□□□ 1.05
POLRMT-202ENST00000588649 CARMIL1Q5VZK9 1371 aa21.58■■□□□ 1.04
POLRMT-202ENST00000588649 RAD54L2Q9Y4B4 1467 aa21.54■■□□□ 1.04
POLRMT-202ENST00000588649 FANCD2Q9BXW9 1451 aa21.54■■□□□ 1.04
POLRMT-202ENST00000588649 YTHDC1Q96MU7 727 aaKnown RBP21.53■■□□□ 1.04
POLRMT-202ENST00000588649 NEUROD1Q13562 356 aa21.53■■□□□ 1.04
POLRMT-202ENST00000588649 CHMP7Q8WUX9 453 aaPredicted RBP21.47■■□□□ 1.03
POLRMT-202ENST00000588649 CFTRP13569 1480 aa21.47■■□□□ 1.03
POLRMT-202ENST00000588649 GTF3C3Q9Y5Q9 886 aa21.46■■□□□ 1.03
POLRMT-202ENST00000588649 ERCC6Q03468 1493 aa21.43■■□□□ 1.02
POLRMT-202ENST00000588649 CHIC2Q9UKJ5 165 aa21.42■■□□□ 1.02
POLRMT-202ENST00000588649 FGD5Q6ZNL6 1462 aa21.42■■□□□ 1.02
POLRMT-202ENST00000588649 IGF1RP08069 1367 aa21.41■■□□□ 1.02
POLRMT-202ENST00000588649 CUX1P39880 1505 aa21.41■■□□□ 1.02
POLRMT-202ENST00000588649 ZNF777Q9ULD5 760 aaPredicted RBP21.39■■□□□ 1.02
POLRMT-202ENST00000588649 PEG3Q9GZU2 1588 aa21.39■■□□□ 1.01
POLRMT-202ENST00000588649 CENPBP07199 599 aaPredicted RBP21.38■■□□□ 1.01
POLRMT-202ENST00000588649 PDS5BQ9NTI5 1447 aa21.37■■□□□ 1.01
POLRMT-202ENST00000588649 HMGXB3Q12766 1538 aa21.34■■□□□ 1.01
POLRMT-202ENST00000588649 TRIM52Q96A61 297 aa21.33■■□□□ 1.01
POLRMT-202ENST00000588649 VPS8Q8N3P4 1428 aa21.31■■□□□ 1
POLRMT-202ENST00000588649 CNGB1Q14028 1251 aaPredicted RBP21.3■■□□□ 1
POLRMT-202ENST00000588649 DIEXFQ68CQ4 756 aaKnown RBP21.29■■□□□ 1
POLRMT-202ENST00000588649 ACIN1Q9UKV3 1341 aaKnown RBP21.28■■□□□ 1
POLRMT-202ENST00000588649 FHOD3Q2V2M9 1422 aa21.25■□□□□ 0.99
POLRMT-202ENST00000588649 MYT1LQ9UL68 1186 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms