RNA–Protein interactions for RNA: ENST00000588462.5

BCAS3-217, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BCAS3, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-217ENST00000588462 NISCHQ9Y2I1 1504 aa22.46■■□□□ 1.19
BCAS3-217ENST00000588462 DCAF8L2P0C7V8 631 aa20.68■□□□□ 0.9
BCAS3-217ENST00000588462 SHROOM4Q9ULL8 1493 aa20.57■□□□□ 0.88
BCAS3-217ENST00000588462 SUPT5HO00267 1087 aaKnown RBP20.25■□□□□ 0.83
BCAS3-217ENST00000588462 EHMT2Q96KQ7 1210 aa19.32■□□□□ 0.68
BCAS3-217ENST00000588462 FAM9AQ8IZU1 332 aaPredicted RBP18.96■□□□□ 0.63
BCAS3-217ENST00000588462 CHIC1Q5VXU3 224 aa18.87■□□□□ 0.61
BCAS3-217ENST00000588462 LOC105371045A0A1W2PR82 267 aa18.84■□□□□ 0.61
BCAS3-217ENST00000588462 PCGF6Q9BYE7 350 aa18.81■□□□□ 0.6
BCAS3-217ENST00000588462 ZCCHC6Q5VYS8 1495 aaKnown RBP18.81■□□□□ 0.6
BCAS3-217ENST00000588462 ABCC9O60706 1549 aa18.69■□□□□ 0.58
BCAS3-217ENST00000588462 TTBK1Q5TCY1 1321 aaPredicted RBP18.55■□□□□ 0.56
BCAS3-217ENST00000588462 PPARGC1BQ86YN6 1023 aaKnown RBP18.53■□□□□ 0.56
BCAS3-217ENST00000588462 TRIM41Q8WV44 630 aa18.51■□□□□ 0.55
BCAS3-217ENST00000588462 MYO15BQ96JP2 1530 aa18.5■□□□□ 0.55
BCAS3-217ENST00000588462 CCDC180Q9P1Z9 1646 aa18.5■□□□□ 0.55
BCAS3-217ENST00000588462 SCRIBQ14160 1630 aa18.36■□□□□ 0.53
BCAS3-217ENST00000588462 PABPN1Q86U42 306 aaKnown RBP eCLIP18.32■□□□□ 0.52
BCAS3-217ENST00000588462 RANGAP1P46060 587 aaPredicted RBP18.24■□□□□ 0.51
BCAS3-217ENST00000588462 HRCP23327 699 aa18.1■□□□□ 0.49
BCAS3-217ENST00000588462 RSF1Q96T23 1441 aaPredicted RBP17.99■□□□□ 0.47
BCAS3-217ENST00000588462 CECR2Q9BXF3 1484 aa17.97■□□□□ 0.47
BCAS3-217ENST00000588462 UBTFP17480 764 aaKnown RBP17.91■□□□□ 0.46
BCAS3-217ENST00000588462 TRIM26Q12899 539 aaPredicted RBP17.9■□□□□ 0.46
BCAS3-217ENST00000588462 DCAF1Q9Y4B6 1507 aa17.79■□□□□ 0.44
BCAS3-217ENST00000588462 RB1CC1Q8TDY2 1594 aa17.76■□□□□ 0.43
BCAS3-217ENST00000588462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.75■□□□□ 0.43
BCAS3-217ENST00000588462 CCER1Q8TC90 406 aaPredicted RBP17.7■□□□□ 0.42
BCAS3-217ENST00000588462 MROH2BQ7Z745 1585 aa17.69■□□□□ 0.42
BCAS3-217ENST00000588462 WIZO95785 1651 aa17.55■□□□□ 0.4
BCAS3-217ENST00000588462 HNRNPUL2Q1KMD3 747 aaKnown RBP17.54■□□□□ 0.4
BCAS3-217ENST00000588462 NACADO15069 1562 aa17.5■□□□□ 0.39
BCAS3-217ENST00000588462 APLP2Q06481 763 aa17.49■□□□□ 0.39
BCAS3-217ENST00000588462 ATP1B4Q9UN42 357 aaPredicted RBP17.46■□□□□ 0.39
BCAS3-217ENST00000588462 ABCC8Q09428 1581 aa17.43■□□□□ 0.38
BCAS3-217ENST00000588462 ITGAEP38570 1179 aa17.4■□□□□ 0.38
BCAS3-217ENST00000588462 CSRNP3Q8WYN3 585 aa17.4■□□□□ 0.38
BCAS3-217ENST00000588462 SOGA1O94964 1423 aa17.35■□□□□ 0.37
BCAS3-217ENST00000588462 CCDC88BA6NC98 1476 aa17.32■□□□□ 0.36
BCAS3-217ENST00000588462 ZEB1P37275 1124 aaPredicted RBP17.31■□□□□ 0.36
BCAS3-217ENST00000588462 YTHDC1Q96MU7 727 aaKnown RBP17.3■□□□□ 0.36
BCAS3-217ENST00000588462 BAZ1AQ9NRL2 1556 aaPredicted RBP17.24■□□□□ 0.35
BCAS3-217ENST00000588462 RUSC2Q8N2Y8 1516 aa17.24■□□□□ 0.35
BCAS3-217ENST00000588462 P3H3Q8IVL6 736 aa17.19■□□□□ 0.34
BCAS3-217ENST00000588462 CEP162Q5TB80 1403 aa17.12■□□□□ 0.33
BCAS3-217ENST00000588462 WRNQ14191 1432 aaPredicted RBP eCLIP17.08■□□□□ 0.33
BCAS3-217ENST00000588462 SMARCA4P51532 1647 aa17.05■□□□□ 0.32
BCAS3-217ENST00000588462 DIEXFQ68CQ4 756 aaKnown RBP17.04■□□□□ 0.32
BCAS3-217ENST00000588462 BAZ1BQ9UIG0 1483 aaKnown RBP17.03■□□□□ 0.32
BCAS3-217ENST00000588462 ARID3CA6NKF2 412 aa16.99■□□□□ 0.31
BCAS3-217ENST00000588462 TOP2AP11388 1531 aaKnown RBP16.99■□□□□ 0.31
BCAS3-217ENST00000588462 SMARCA2P51531 1590 aa16.95■□□□□ 0.3
BCAS3-217ENST00000588462 CLIP1P30622 1438 aa16.92■□□□□ 0.3
BCAS3-217ENST00000588462 FAM50AQ14320 339 aaKnown RBP16.9■□□□□ 0.3
BCAS3-217ENST00000588462 TNIKQ9UKE5 1360 aa16.88■□□□□ 0.29
BCAS3-217ENST00000588462 ATAD2BQ9ULI0 1458 aa16.88■□□□□ 0.29
BCAS3-217ENST00000588462 GOLGA3Q08378 1498 aa16.84■□□□□ 0.29
BCAS3-217ENST00000588462 NEUROD1Q13562 356 aa16.83■□□□□ 0.29
BCAS3-217ENST00000588462 KANK4Q5T7N3 995 aaPredicted RBP16.83■□□□□ 0.28
BCAS3-217ENST00000588462 DNAJC5BQ9UF47 199 aa16.81■□□□□ 0.28
BCAS3-217ENST00000588462 UNC13AQ9UPW8 1703 aa16.8■□□□□ 0.28
BCAS3-217ENST00000588462 BICRAQ9NZM4 1560 aa16.8■□□□□ 0.28
BCAS3-217ENST00000588462 RAPGEF2Q9Y4G8 1499 aa16.8■□□□□ 0.28
BCAS3-217ENST00000588462 SCAF1Q9H7N4 1312 aaKnown RBP16.79■□□□□ 0.28
BCAS3-217ENST00000588462 ZNF316A6NFI3 1004 aaPredicted RBP16.75■□□□□ 0.27
BCAS3-217ENST00000588462 CENPBP07199 599 aaPredicted RBP16.75■□□□□ 0.27
BCAS3-217ENST00000588462 GTF3C3Q9Y5Q9 886 aa16.74■□□□□ 0.27
BCAS3-217ENST00000588462 HIRIP3Q9BW71 556 aaPredicted RBP16.73■□□□□ 0.27
BCAS3-217ENST00000588462 CNGB1Q14028 1251 aaPredicted RBP16.72■□□□□ 0.27
BCAS3-217ENST00000588462 CEP164Q9UPV0 1460 aa16.71■□□□□ 0.26
BCAS3-217ENST00000588462 SYNJ1O43426 1573 aa16.7■□□□□ 0.26
BCAS3-217ENST00000588462 MIER1Q8N108 512 aa16.69■□□□□ 0.26
BCAS3-217ENST00000588462 EEA1Q15075 1411 aa16.67■□□□□ 0.26
BCAS3-217ENST00000588462 FBLN2P98095 1184 aa16.64■□□□□ 0.26
BCAS3-217ENST00000588462 PELP1Q8IZL8 1130 aaKnown RBP16.64■□□□□ 0.25
BCAS3-217ENST00000588462 ACIN1Q9UKV3 1341 aaKnown RBP16.6■□□□□ 0.25
BCAS3-217ENST00000588462 CUX2O14529 1486 aa16.6■□□□□ 0.25
BCAS3-217ENST00000588462 KIF27Q86VH2 1401 aa16.58■□□□□ 0.24
BCAS3-217ENST00000588462 CHIC2Q9UKJ5 165 aa16.56■□□□□ 0.24
BCAS3-217ENST00000588462 VPS8Q8N3P4 1428 aa16.56■□□□□ 0.24
BCAS3-217ENST00000588462 SIN3AQ96ST3 1273 aa16.54■□□□□ 0.24
BCAS3-217ENST00000588462 EIF4G1Q04637 1599 aaKnown RBP16.53■□□□□ 0.24
BCAS3-217ENST00000588462 TDRD9Q8NDG6 1382 aaKnown RBP16.5■□□□□ 0.23
BCAS3-217ENST00000588462 CARMIL1Q5VZK9 1371 aa16.48■□□□□ 0.23
BCAS3-217ENST00000588462 TRIM52Q96A61 297 aa16.48■□□□□ 0.23
BCAS3-217ENST00000588462 POLR3GLQ9BT43 218 aa16.47■□□□□ 0.23
BCAS3-217ENST00000588462 DDX10Q13206 875 aaKnown RBP16.44■□□□□ 0.22
BCAS3-217ENST00000588462 NESP48681 1621 aa16.43■□□□□ 0.22
BCAS3-217ENST00000588462 BCANQ96GW7 911 aa16.43■□□□□ 0.22
BCAS3-217ENST00000588462 CADPSQ9ULU8 1353 aa16.43■□□□□ 0.22
BCAS3-217ENST00000588462 RAD54L2Q9Y4B4 1467 aa16.42■□□□□ 0.22
BCAS3-217ENST00000588462 RRP7BPQ9NSQ0 103 aa16.41■□□□□ 0.22
BCAS3-217ENST00000588462 CUX1P39880 1505 aa16.39■□□□□ 0.21
BCAS3-217ENST00000588462 KIF21BO75037 1637 aa16.39■□□□□ 0.21
BCAS3-217ENST00000588462 MYT1Q01538 1121 aa16.39■□□□□ 0.21
BCAS3-217ENST00000588462 ARAP1Q96P48 1450 aa16.39■□□□□ 0.21
BCAS3-217ENST00000588462 ZNF777Q9ULD5 760 aaPredicted RBP16.38■□□□□ 0.21
BCAS3-217ENST00000588462 IGF1RP08069 1367 aa16.37■□□□□ 0.21
BCAS3-217ENST00000588462 NCAPD3P42695 1498 aa16.37■□□□□ 0.21
BCAS3-217ENST00000588462 FHOD3Q2V2M9 1422 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms