RNA–Protein interactions for RNA: ENST00000588238.1

UBXN6-205, Transcript of UBX domain protein 6, humanhuman

Gene UBXN6, Length 4,598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN6-205ENST00000588238 NISCHQ9Y2I1 1504 aa27.74■■■□□ 2.03
UBXN6-205ENST00000588238 DCAF8L2P0C7V8 631 aa27.46■■□□□ 1.99
UBXN6-205ENST00000588238 SUPT5HO00267 1087 aaKnown RBP25.73■■□□□ 1.71
UBXN6-205ENST00000588238 SHROOM4Q9ULL8 1493 aa25.72■■□□□ 1.71
UBXN6-205ENST00000588238 EHMT2Q96KQ7 1210 aa24.55■■□□□ 1.52
UBXN6-205ENST00000588238 FAM9AQ8IZU1 332 aaPredicted RBP24.17■■□□□ 1.46
UBXN6-205ENST00000588238 ABCC9O60706 1549 aa24.02■■□□□ 1.44
UBXN6-205ENST00000588238 TRIM41Q8WV44 630 aa23.89■■□□□ 1.41
UBXN6-205ENST00000588238 APLP2Q06481 763 aa23.83■■□□□ 1.4
UBXN6-205ENST00000588238 RANGAP1P46060 587 aaPredicted RBP23.67■■□□□ 1.38
UBXN6-205ENST00000588238 PABPN1Q86U42 306 aaKnown RBP eCLIP23.63■■□□□ 1.37
UBXN6-205ENST00000588238 TTBK1Q5TCY1 1321 aaPredicted RBP23.57■■□□□ 1.36
UBXN6-205ENST00000588238 UBTFP17480 764 aaKnown RBP23.47■■□□□ 1.35
UBXN6-205ENST00000588238 ATP1B4Q9UN42 357 aaPredicted RBP23.36■■□□□ 1.33
UBXN6-205ENST00000588238 PCGF6Q9BYE7 350 aa23.25■■□□□ 1.31
UBXN6-205ENST00000588238 CHIC1Q5VXU3 224 aa23.12■■□□□ 1.29
UBXN6-205ENST00000588238 CCDC180Q9P1Z9 1646 aa22.97■■□□□ 1.27
UBXN6-205ENST00000588238 ZCCHC6Q5VYS8 1495 aaKnown RBP22.97■■□□□ 1.27
UBXN6-205ENST00000588238 PPARGC1BQ86YN6 1023 aaKnown RBP22.93■■□□□ 1.26
UBXN6-205ENST00000588238 LOC105371045A0A1W2PR82 267 aa22.92■■□□□ 1.26
UBXN6-205ENST00000588238 SCRIBQ14160 1630 aa22.81■■□□□ 1.24
UBXN6-205ENST00000588238 HRCP23327 699 aa22.81■■□□□ 1.24
UBXN6-205ENST00000588238 CCER1Q8TC90 406 aaPredicted RBP22.79■■□□□ 1.24
UBXN6-205ENST00000588238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.73■■□□□ 1.23
UBXN6-205ENST00000588238 HNRNPUL2Q1KMD3 747 aaKnown RBP22.73■■□□□ 1.23
UBXN6-205ENST00000588238 PELP1Q8IZL8 1130 aaKnown RBP22.7■■□□□ 1.22
UBXN6-205ENST00000588238 ITGAEP38570 1179 aa22.53■■□□□ 1.2
UBXN6-205ENST00000588238 ZEB1P37275 1124 aaPredicted RBP22.52■■□□□ 1.2
UBXN6-205ENST00000588238 TRIM26Q12899 539 aaPredicted RBP22.48■■□□□ 1.19
UBXN6-205ENST00000588238 RB1CC1Q8TDY2 1594 aa22.47■■□□□ 1.19
UBXN6-205ENST00000588238 MYT1LQ9UL68 1186 aa22.43■■□□□ 1.18
UBXN6-205ENST00000588238 FBLN2P98095 1184 aa22.4■■□□□ 1.18
UBXN6-205ENST00000588238 NACADO15069 1562 aa22.32■■□□□ 1.16
UBXN6-205ENST00000588238 CSRNP3Q8WYN3 585 aa22.23■■□□□ 1.15
UBXN6-205ENST00000588238 CENPBP07199 599 aaPredicted RBP22.1■■□□□ 1.13
UBXN6-205ENST00000588238 P3H3Q8IVL6 736 aa22.1■■□□□ 1.13
UBXN6-205ENST00000588238 FAM50AQ14320 339 aaKnown RBP22.09■■□□□ 1.13
UBXN6-205ENST00000588238 MYT1Q01538 1121 aa22.07■■□□□ 1.12
UBXN6-205ENST00000588238 RSF1Q96T23 1441 aaPredicted RBP22.06■■□□□ 1.12
UBXN6-205ENST00000588238 DCAF1Q9Y4B6 1507 aa22.01■■□□□ 1.11
UBXN6-205ENST00000588238 ARID3CA6NKF2 412 aa21.97■■□□□ 1.11
UBXN6-205ENST00000588238 POLR3GLQ9BT43 218 aa21.87■■□□□ 1.09
UBXN6-205ENST00000588238 BAZ1BQ9UIG0 1483 aaKnown RBP21.85■■□□□ 1.09
UBXN6-205ENST00000588238 CECR2Q9BXF3 1484 aa21.84■■□□□ 1.09
UBXN6-205ENST00000588238 TRIM52Q96A61 297 aa21.84■■□□□ 1.09
UBXN6-205ENST00000588238 YTHDC1Q96MU7 727 aaKnown RBP21.79■■□□□ 1.08
UBXN6-205ENST00000588238 BAZ1AQ9NRL2 1556 aaPredicted RBP21.74■■□□□ 1.07
UBXN6-205ENST00000588238 CDK11AQ9UQ88 783 aaPredicted RBP21.68■■□□□ 1.06
UBXN6-205ENST00000588238 CNGB1Q14028 1251 aaPredicted RBP21.67■■□□□ 1.06
UBXN6-205ENST00000588238 CHMP7Q8WUX9 453 aaPredicted RBP21.66■■□□□ 1.06
UBXN6-205ENST00000588238 ZNF777Q9ULD5 760 aaPredicted RBP21.66■■□□□ 1.06
UBXN6-205ENST00000588238 NEUROD1Q13562 356 aa21.65■■□□□ 1.06
UBXN6-205ENST00000588238 WRNQ14191 1432 aaPredicted RBP eCLIP21.6■■□□□ 1.05
UBXN6-205ENST00000588238 NPM1P06748 294 aaKnown RBP eCLIP21.53■■□□□ 1.04
UBXN6-205ENST00000588238 MROH2BQ7Z745 1585 aa21.51■■□□□ 1.03
UBXN6-205ENST00000588238 MYO15BQ96JP2 1530 aa21.5■■□□□ 1.03
UBXN6-205ENST00000588238 NEFLP07196 543 aa21.5■■□□□ 1.03
UBXN6-205ENST00000588238 SLC4A1APQ9BWU0 796 aaKnown RBP21.5■■□□□ 1.03
UBXN6-205ENST00000588238 ZNF326Q5BKZ1 582 aaKnown RBP21.49■■□□□ 1.03
UBXN6-205ENST00000588238 ERCC6Q03468 1493 aa21.44■■□□□ 1.02
UBXN6-205ENST00000588238 EEA1Q15075 1411 aa21.39■■□□□ 1.02
UBXN6-205ENST00000588238 CLIP1P30622 1438 aa21.39■■□□□ 1.01
UBXN6-205ENST00000588238 GTF3C3Q9Y5Q9 886 aa21.39■■□□□ 1.01
UBXN6-205ENST00000588238 KIF27Q86VH2 1401 aa21.38■■□□□ 1.01
UBXN6-205ENST00000588238 DIEXFQ68CQ4 756 aaKnown RBP21.36■■□□□ 1.01
UBXN6-205ENST00000588238 SCAF1Q9H7N4 1312 aaKnown RBP21.31■■□□□ 1
UBXN6-205ENST00000588238 CCDC88BA6NC98 1476 aa21.31■■□□□ 1
UBXN6-205ENST00000588238 MTUS2Q5JR59 1369 aa21.31■■□□□ 1
UBXN6-205ENST00000588238 SMARCA2P51531 1590 aa21.3■■□□□ 1
UBXN6-205ENST00000588238 ACIN1Q9UKV3 1341 aaKnown RBP21.29■■□□□ 1
UBXN6-205ENST00000588238 GOLGA3Q08378 1498 aa21.28■■□□□ 1
UBXN6-205ENST00000588238 CHIC2Q9UKJ5 165 aa21.28■■□□□ 1
UBXN6-205ENST00000588238 ERICH6Q7L0X2 663 aa21.26■□□□□ 0.99
UBXN6-205ENST00000588238 CEP162Q5TB80 1403 aa21.21■□□□□ 0.99
UBXN6-205ENST00000588238 ESF1Q9H501 851 aaKnown RBP21.21■□□□□ 0.99
UBXN6-205ENST00000588238 KCNH8Q96L42 1107 aa21.2■□□□□ 0.98
UBXN6-205ENST00000588238 BCANQ96GW7 911 aa21.19■□□□□ 0.98
UBXN6-205ENST00000588238 TSPY4P0CV99 314 aa21.19■□□□□ 0.98
UBXN6-205ENST00000588238 TSPY10P0CW01 314 aa21.19■□□□□ 0.98
UBXN6-205ENST00000588238 CUX2O14529 1486 aa21.16■□□□□ 0.98
UBXN6-205ENST00000588238 CEP164Q9UPV0 1460 aa21.16■□□□□ 0.98
UBXN6-205ENST00000588238 PLEKHD1A6NEE1 506 aa21.16■□□□□ 0.98
UBXN6-205ENST00000588238 PDS5BQ9NTI5 1447 aa21.15■□□□□ 0.98
UBXN6-205ENST00000588238 WIZO95785 1651 aa21.14■□□□□ 0.98
UBXN6-205ENST00000588238 SOGA1O94964 1423 aa21.14■□□□□ 0.97
UBXN6-205ENST00000588238 ATAD2BQ9ULI0 1458 aa21.13■□□□□ 0.97
UBXN6-205ENST00000588238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.13■□□□□ 0.97
UBXN6-205ENST00000588238 TNIKQ9UKE5 1360 aa21.13■□□□□ 0.97
UBXN6-205ENST00000588238 CHGAP10645 457 aaKnown RBP21.11■□□□□ 0.97
UBXN6-205ENST00000588238 CARMIL1Q5VZK9 1371 aa21.11■□□□□ 0.97
UBXN6-205ENST00000588238 PLPPR3Q6T4P5 718 aa21.09■□□□□ 0.97
UBXN6-205ENST00000588238 CADPSQ9ULU8 1353 aa21.08■□□□□ 0.97
UBXN6-205ENST00000588238 TOP2AP11388 1531 aaKnown RBP21.06■□□□□ 0.96
UBXN6-205ENST00000588238 ABCC8Q09428 1581 aa21.06■□□□□ 0.96
UBXN6-205ENST00000588238 ZNF316A6NFI3 1004 aaPredicted RBP21.06■□□□□ 0.96
UBXN6-205ENST00000588238 STAG3Q9UJ98 1225 aa21.04■□□□□ 0.96
UBXN6-205ENST00000588238 TDRD9Q8NDG6 1382 aaKnown RBP21.04■□□□□ 0.96
UBXN6-205ENST00000588238 TONSLQ96HA7 1378 aa21.03■□□□□ 0.96
UBXN6-205ENST00000588238 ANP32CO43423 234 aa21.02■□□□□ 0.96
UBXN6-205ENST00000588238 RRP7BPQ9NSQ0 103 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms