RNA–Protein interactions for RNA: ENST00000588183.5

HDHD2-205, Transcript of haloacid dehalogenase like hydrolase domain containing 2, humanhuman

TSL 1 (best)

Gene HDHD2, Length 2,224 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD2-205ENST00000588183 NISCHQ9Y2I1 1504 aa36.32■■■■□ 3.4
HDHD2-205ENST00000588183 CCDC180Q9P1Z9 1646 aa31.27■■■□□ 2.6
HDHD2-205ENST00000588183 ZCCHC6Q5VYS8 1495 aaKnown RBP30.64■■■□□ 2.49
HDHD2-205ENST00000588183 SHROOM4Q9ULL8 1493 aa30.36■■■□□ 2.45
HDHD2-205ENST00000588183 DCAF8L2P0C7V8 631 aa30.01■■■□□ 2.39
HDHD2-205ENST00000588183 DCAF1Q9Y4B6 1507 aa29.88■■■□□ 2.37
HDHD2-205ENST00000588183 SUPT5HO00267 1087 aaKnown RBP29.47■■■□□ 2.31
HDHD2-205ENST00000588183 ABCC9O60706 1549 aa29.25■■■□□ 2.27
HDHD2-205ENST00000588183 MYO15BQ96JP2 1530 aa29.23■■■□□ 2.27
HDHD2-205ENST00000588183 SCRIBQ14160 1630 aa29.09■■■□□ 2.25
HDHD2-205ENST00000588183 NACADO15069 1562 aa28.97■■■□□ 2.23
HDHD2-205ENST00000588183 RB1CC1Q8TDY2 1594 aa28.61■■■□□ 2.17
HDHD2-205ENST00000588183 RSF1Q96T23 1441 aaPredicted RBP28.47■■■□□ 2.15
HDHD2-205ENST00000588183 CHIC1Q5VXU3 224 aa28.45■■■□□ 2.15
HDHD2-205ENST00000588183 CECR2Q9BXF3 1484 aa28.3■■■□□ 2.12
HDHD2-205ENST00000588183 UNC13AQ9UPW8 1703 aa28.21■■■□□ 2.11
HDHD2-205ENST00000588183 MROH2BQ7Z745 1585 aa28.18■■■□□ 2.1
HDHD2-205ENST00000588183 WIZO95785 1651 aa28.02■■■□□ 2.08
HDHD2-205ENST00000588183 BAZ1AQ9NRL2 1556 aaPredicted RBP27.95■■■□□ 2.06
HDHD2-205ENST00000588183 BICRAQ9NZM4 1560 aa27.85■■■□□ 2.05
HDHD2-205ENST00000588183 SMARCA4P51532 1647 aa27.81■■■□□ 2.04
HDHD2-205ENST00000588183 PABPN1Q86U42 306 aaKnown RBP eCLIP27.77■■■□□ 2.04
HDHD2-205ENST00000588183 TOP2AP11388 1531 aaKnown RBP27.62■■■□□ 2.01
HDHD2-205ENST00000588183 TRIM41Q8WV44 630 aa27.53■■■□□ 2
HDHD2-205ENST00000588183 LOC105371045A0A1W2PR82 267 aa27.51■■□□□ 1.99
HDHD2-205ENST00000588183 EIF4G1Q04637 1599 aaKnown RBP27.48■■□□□ 1.99
HDHD2-205ENST00000588183 SMARCA2P51531 1590 aa27.43■■□□□ 1.98
HDHD2-205ENST00000588183 CCDC88BA6NC98 1476 aa27.41■■□□□ 1.98
HDHD2-205ENST00000588183 PEG3Q9GZU2 1588 aa27.33■■□□□ 1.97
HDHD2-205ENST00000588183 FAM9AQ8IZU1 332 aaPredicted RBP27.24■■□□□ 1.95
HDHD2-205ENST00000588183 ATAD2BQ9ULI0 1458 aa27.18■■□□□ 1.94
HDHD2-205ENST00000588183 ABCC8Q09428 1581 aa27.15■■□□□ 1.94
HDHD2-205ENST00000588183 BAZ1BQ9UIG0 1483 aaKnown RBP27.08■■□□□ 1.92
HDHD2-205ENST00000588183 EHMT2Q96KQ7 1210 aa26.96■■□□□ 1.91
HDHD2-205ENST00000588183 PCGF6Q9BYE7 350 aa26.9■■□□□ 1.9
HDHD2-205ENST00000588183 HMGXB3Q12766 1538 aa26.78■■□□□ 1.88
HDHD2-205ENST00000588183 NCAPD3P42695 1498 aa26.76■■□□□ 1.87
HDHD2-205ENST00000588183 WRNQ14191 1432 aaPredicted RBP eCLIP26.76■■□□□ 1.87
HDHD2-205ENST00000588183 SOGA1O94964 1423 aa26.74■■□□□ 1.87
HDHD2-205ENST00000588183 SYNJ1O43426 1573 aa26.7■■□□□ 1.86
HDHD2-205ENST00000588183 RUSC2Q8N2Y8 1516 aa26.64■■□□□ 1.86
HDHD2-205ENST00000588183 TRIM26Q12899 539 aaPredicted RBP26.59■■□□□ 1.85
HDHD2-205ENST00000588183 EEA1Q15075 1411 aa26.58■■□□□ 1.85
HDHD2-205ENST00000588183 HRCP23327 699 aa26.57■■□□□ 1.84
HDHD2-205ENST00000588183 CSRNP3Q8WYN3 585 aa26.5■■□□□ 1.83
HDHD2-205ENST00000588183 TOP2BQ02880 1626 aa26.44■■□□□ 1.82
HDHD2-205ENST00000588183 CC2D2AQ9P2K1 1620 aa26.41■■□□□ 1.82
HDHD2-205ENST00000588183 BIVM-ERCC5R4GMW8 1640 aa26.4■■□□□ 1.82
HDHD2-205ENST00000588183 CFTRP13569 1480 aa26.38■■□□□ 1.81
HDHD2-205ENST00000588183 TNIKQ9UKE5 1360 aa26.38■■□□□ 1.81
HDHD2-205ENST00000588183 CEP162Q5TB80 1403 aa26.37■■□□□ 1.81
HDHD2-205ENST00000588183 GOLGA3Q08378 1498 aa26.36■■□□□ 1.81
HDHD2-205ENST00000588183 UBTFP17480 764 aaKnown RBP26.3■■□□□ 1.8
HDHD2-205ENST00000588183 KIF21BO75037 1637 aa26.29■■□□□ 1.8
HDHD2-205ENST00000588183 CUX1P39880 1505 aa26.29■■□□□ 1.8
HDHD2-205ENST00000588183 PRDM2Q13029 1718 aa26.28■■□□□ 1.8
HDHD2-205ENST00000588183 PPARGC1BQ86YN6 1023 aaKnown RBP26.27■■□□□ 1.8
HDHD2-205ENST00000588183 CEP164Q9UPV0 1460 aa26.27■■□□□ 1.8
HDHD2-205ENST00000588183 CADPSQ9ULU8 1353 aa26.17■■□□□ 1.78
HDHD2-205ENST00000588183 RAPGEF2Q9Y4G8 1499 aa26.14■■□□□ 1.78
HDHD2-205ENST00000588183 CLIP1P30622 1438 aa25.99■■□□□ 1.75
HDHD2-205ENST00000588183 PRXQ9BXM0 1461 aa25.99■■□□□ 1.75
HDHD2-205ENST00000588183 KIF27Q86VH2 1401 aa25.98■■□□□ 1.75
HDHD2-205ENST00000588183 ERICH3Q5RHP9 1530 aa25.97■■□□□ 1.75
HDHD2-205ENST00000588183 TTBK1Q5TCY1 1321 aaPredicted RBP25.97■■□□□ 1.75
HDHD2-205ENST00000588183 FANCD2Q9BXW9 1451 aa25.94■■□□□ 1.74
HDHD2-205ENST00000588183 NESP48681 1621 aa25.91■■□□□ 1.74
HDHD2-205ENST00000588183 FGD5Q6ZNL6 1462 aa25.9■■□□□ 1.74
HDHD2-205ENST00000588183 RANGAP1P46060 587 aaPredicted RBP25.87■■□□□ 1.73
HDHD2-205ENST00000588183 CUX2O14529 1486 aa25.86■■□□□ 1.73
HDHD2-205ENST00000588183 VPS8Q8N3P4 1428 aa25.83■■□□□ 1.73
HDHD2-205ENST00000588183 DNMBPQ6XZF7 1577 aa25.78■■□□□ 1.72
HDHD2-205ENST00000588183 ZEB1P37275 1124 aaPredicted RBP25.75■■□□□ 1.71
HDHD2-205ENST00000588183 DNAJC5BQ9UF47 199 aa25.75■■□□□ 1.71
HDHD2-205ENST00000588183 LAMC3Q9Y6N6 1575 aa25.75■■□□□ 1.71
HDHD2-205ENST00000588183 TOPBP1Q92547 1522 aa25.73■■□□□ 1.71
HDHD2-205ENST00000588183 IGF1RP08069 1367 aa25.72■■□□□ 1.71
HDHD2-205ENST00000588183 ARAP1Q96P48 1450 aa25.7■■□□□ 1.71
HDHD2-205ENST00000588183 RAD54L2Q9Y4B4 1467 aa25.67■■□□□ 1.7
HDHD2-205ENST00000588183 POLA1P09884 1462 aaPredicted RBP25.66■■□□□ 1.7
HDHD2-205ENST00000588183 URB2Q14146 1524 aaKnown RBP25.61■■□□□ 1.69
HDHD2-205ENST00000588183 CARMIL1Q5VZK9 1371 aa25.61■■□□□ 1.69
HDHD2-205ENST00000588183 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.61■■□□□ 1.69
HDHD2-205ENST00000588183 ABCA10Q8WWZ4 1543 aa25.6■■□□□ 1.69
HDHD2-205ENST00000588183 APLP2Q06481 763 aa25.57■■□□□ 1.68
HDHD2-205ENST00000588183 ARHGAP35Q9NRY4 1499 aa25.56■■□□□ 1.68
HDHD2-205ENST00000588183 KIF21AQ7Z4S6 1674 aa25.55■■□□□ 1.68
HDHD2-205ENST00000588183 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
HDHD2-205ENST00000588183 WDR97A6NE52 1622 aa25.5■■□□□ 1.67
HDHD2-205ENST00000588183 CCER1Q8TC90 406 aaPredicted RBP25.5■■□□□ 1.67
HDHD2-205ENST00000588183 CUL7Q14999 1698 aa25.41■■□□□ 1.66
HDHD2-205ENST00000588183 ABCA5Q8WWZ7 1642 aa25.38■■□□□ 1.65
HDHD2-205ENST00000588183 KANK4Q5T7N3 995 aaPredicted RBP25.37■■□□□ 1.65
HDHD2-205ENST00000588183 HNRNPUL2Q1KMD3 747 aaKnown RBP25.36■■□□□ 1.65
HDHD2-205ENST00000588183 TDRD9Q8NDG6 1382 aaKnown RBP25.34■■□□□ 1.65
HDHD2-205ENST00000588183 GAPVD1Q14C86 1478 aa25.29■■□□□ 1.64
HDHD2-205ENST00000588183 CTTNBP2Q8WZ74 1663 aa25.29■■□□□ 1.64
HDHD2-205ENST00000588183 TARBP1Q13395 1621 aaKnown RBP25.28■■□□□ 1.64
HDHD2-205ENST00000588183 MRC2Q9UBG0 1479 aa25.22■■□□□ 1.63
HDHD2-205ENST00000588183 P3H3Q8IVL6 736 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms