RNA–Protein interactions for RNA: ENST00000587787.1

FAM198B-204, Transcript of family with sequence similarity 198 member B, humanhuman

TSL 4

Gene FAM198B, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM198B-204ENST00000587787 AEBP2Q6ZN18 517 aaPredicted RBP23.19■■□□□ 1.3
FAM198B-204ENST00000587787 CHIC1Q5VXU3 224 aa22.27■■□□□ 1.16
FAM198B-204ENST00000587787 SENP3Q9H4L4 574 aaPredicted RBP19.86■□□□□ 0.77
FAM198B-204ENST00000587787 PHF23Q9BUL5 403 aaPredicted RBP19.61■□□□□ 0.73
FAM198B-204ENST00000587787 FOXD1Q16676 465 aa18.52■□□□□ 0.56
FAM198B-204ENST00000587787 PLPPR3Q6T4P5 718 aa18.1■□□□□ 0.49
FAM198B-204ENST00000587787 NISCHQ9Y2I1 1504 aa18.04■□□□□ 0.48
FAM198B-204ENST00000587787 POTEDQ86YR6 584 aa17.55■□□□□ 0.4
FAM198B-204ENST00000587787 MSH5O43196 834 aa17.48■□□□□ 0.39
FAM198B-204ENST00000587787 PPP6R1Q9UPN7 881 aa17.29■□□□□ 0.36
FAM198B-204ENST00000587787 ADRA2BP18089 450 aa17.28■□□□□ 0.36
FAM198B-204ENST00000587787 PIAS4Q8N2W9 510 aaPredicted RBP17.22■□□□□ 0.35
FAM198B-204ENST00000587787 PPP4R3CPQ6ZMV5 832 aa15.98■□□□□ 0.15
FAM198B-204ENST00000587787 CCDC180Q9P1Z9 1646 aa15.86■□□□□ 0.13
FAM198B-204ENST00000587787 SCAF1Q9H7N4 1312 aaKnown RBP15.76■□□□□ 0.11
FAM198B-204ENST00000587787 DMRT2Q9Y5R5 561 aa15.7■□□□□ 0.1
FAM198B-204ENST00000587787 KCNA4P22459 653 aa15.69■□□□□ 0.1
FAM198B-204ENST00000587787 MAPK8IP2Q13387 824 aaPredicted RBP15.68■□□□□ 0.1
FAM198B-204ENST00000587787 NCBP3Q53F19 620 aaKnown RBP15.56■□□□□ 0.08
FAM198B-204ENST00000587787 CNKSR2Q8WXI2 1034 aa15.5■□□□□ 0.07
FAM198B-204ENST00000587787 NPM3O75607 178 aaKnown RBP15.35■□□□□ 0.05
FAM198B-204ENST00000587787 RNF216Q9NWF9 866 aaPredicted RBP15.17■□□□□ 0.02
FAM198B-204ENST00000587787 ABCC9O60706 1549 aa15.16■□□□□ 0.02
FAM198B-204ENST00000587787 CACNB1Q02641 598 aaPredicted RBP15.14■□□□□ 0.01
FAM198B-204ENST00000587787 ZCCHC6Q5VYS8 1495 aaKnown RBP15.14■□□□□ 0.01
FAM198B-204ENST00000587787 HOXD11P31277 338 aaPredicted RBP15.1■□□□□ 0.01
FAM198B-204ENST00000587787 DCAF8L1A6NGE4 600 aa14.98□□□□□ -0.01
FAM198B-204ENST00000587787 SLC4A1APQ9BWU0 796 aaKnown RBP14.95□□□□□ -0.02
FAM198B-204ENST00000587787 DCAF1Q9Y4B6 1507 aa14.92□□□□□ -0.02
FAM198B-204ENST00000587787 DCAF8L2P0C7V8 631 aa14.9□□□□□ -0.02
FAM198B-204ENST00000587787 RNF39Q9H2S5 420 aa14.88□□□□□ -0.03
FAM198B-204ENST00000587787 DNAJC5BQ9UF47 199 aa14.85□□□□□ -0.03
FAM198B-204ENST00000587787 MYO15BQ96JP2 1530 aa14.8□□□□□ -0.04
FAM198B-204ENST00000587787 NACADO15069 1562 aa14.78□□□□□ -0.04
FAM198B-204ENST00000587787 RB1CC1Q8TDY2 1594 aa14.72□□□□□ -0.05
FAM198B-204ENST00000587787 C1QBPQ07021 282 aaKnown RBP14.66□□□□□ -0.06
FAM198B-204ENST00000587787 EHMT2Q96KQ7 1210 aa14.62□□□□□ -0.07
FAM198B-204ENST00000587787 SHROOM4Q9ULL8 1493 aa14.58□□□□□ -0.08
FAM198B-204ENST00000587787 SCRIBQ14160 1630 aa14.57□□□□□ -0.08
FAM198B-204ENST00000587787 UNC13AQ9UPW8 1703 aa14.49□□□□□ -0.09
FAM198B-204ENST00000587787 SLC4A2P04920 1241 aa14.48□□□□□ -0.09
FAM198B-204ENST00000587787 ZBTB22O15209 634 aa14.45□□□□□ -0.1
FAM198B-204ENST00000587787 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.41□□□□□ -0.17e-11■■□□□ 13.6
FAM198B-204ENST00000587787 CSRNP3Q8WYN3 585 aa14.4□□□□□ -0.1
FAM198B-204ENST00000587787 FOXD4L1Q9NU39 408 aa14.4□□□□□ -0.1
FAM198B-204ENST00000587787 BICRAQ9NZM4 1560 aa14.3□□□□□ -0.12
FAM198B-204ENST00000587787 PABPN1Q86U42 306 aaKnown RBP eCLIP14.22□□□□□ -0.13
FAM198B-204ENST00000587787 U3KPZ7 1027 aaPredicted RBP14.18□□□□□ -0.14
FAM198B-204ENST00000587787 MYCNP04198 464 aaPredicted RBP14.17□□□□□ -0.14
FAM198B-204ENST00000587787 CECR2Q9BXF3 1484 aa14.05□□□□□ -0.16
FAM198B-204ENST00000587787 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.99□□□□□ -0.17
FAM198B-204ENST00000587787 HNRNPUL2Q1KMD3 747 aaKnown RBP13.99□□□□□ -0.17
FAM198B-204ENST00000587787 SAMD1Q6SPF0 538 aaPredicted RBP13.96□□□□□ -0.17
FAM198B-204ENST00000587787 MROH2BQ7Z745 1585 aa13.95□□□□□ -0.18
FAM198B-204ENST00000587787 BAZ1AQ9NRL2 1556 aaPredicted RBP13.95□□□□□ -0.18
FAM198B-204ENST00000587787 SMARCA4P51532 1647 aa13.94□□□□□ -0.18
FAM198B-204ENST00000587787 RSF1Q96T23 1441 aaPredicted RBP13.91□□□□□ -0.18
FAM198B-204ENST00000587787 SUPT5HO00267 1087 aaKnown RBP13.89□□□□□ -0.19
FAM198B-204ENST00000587787 ATXN8OSP0DMR3 200 aa13.88□□□□□ -0.19
FAM198B-204ENST00000587787 EIF4G1Q04637 1599 aaKnown RBP13.88□□□□□ -0.19
FAM198B-204ENST00000587787 WIZO95785 1651 aa13.84□□□□□ -0.19
FAM198B-204ENST00000587787 DSG3P32926 999 aa13.83□□□□□ -0.2
FAM198B-204ENST00000587787 APLP2Q06481 763 aa13.83□□□□□ -0.2
FAM198B-204ENST00000587787 ATF5Q9Y2D1 282 aaPredicted RBP13.82□□□□□ -0.2
FAM198B-204ENST00000587787 SPINK5Q9NQ38 1064 aaPredicted RBP13.8□□□□□ -0.2
FAM198B-204ENST00000587787 CAPN15O75808 1086 aa13.78□□□□□ -0.2
FAM198B-204ENST00000587787 PEG3Q9GZU2 1588 aa13.76□□□□□ -0.21
FAM198B-204ENST00000587787 ATAD2BQ9ULI0 1458 aa13.74□□□□□ -0.21
FAM198B-204ENST00000587787 CC2D2AQ9P2K1 1620 aa13.72□□□□□ -0.21
FAM198B-204ENST00000587787 SMARCA2P51531 1590 aa13.72□□□□□ -0.21
FAM198B-204ENST00000587787 POTEHQ6S545 545 aa13.7□□□□□ -0.22
FAM198B-204ENST00000587787 TOP2AP11388 1531 aaKnown RBP13.68□□□□□ -0.22
FAM198B-204ENST00000587787 TRHP20396 242 aaPredicted RBP13.67□□□□□ -0.22
FAM198B-204ENST00000587787 BAZ1BQ9UIG0 1483 aaKnown RBP13.65□□□□□ -0.22
FAM198B-204ENST00000587787 ZNF219Q9P2Y4 722 aaPredicted RBP13.64□□□□□ -0.23
FAM198B-204ENST00000587787 NCAPD3P42695 1498 aa13.63□□□□□ -0.23
FAM198B-204ENST00000587787 HMGXB3Q12766 1538 aa13.63□□□□□ -0.23
FAM198B-204ENST00000587787 CCDC88BA6NC98 1476 aa13.51□□□□□ -0.25
FAM198B-204ENST00000587787 ABCB7O75027 752 aa13.47□□□□□ -0.25
FAM198B-204ENST00000587787 POLA2Q14181 598 aa13.46□□□□□ -0.25
FAM198B-204ENST00000587787 CFTRP13569 1480 aa13.28□□□□□ -0.28
FAM198B-204ENST00000587787 PRDM2Q13029 1718 aa13.27□□□□□ -0.28
FAM198B-204ENST00000587787 CADPSQ9ULU8 1353 aa13.26□□□□□ -0.29
FAM198B-204ENST00000587787 NESP48681 1621 aa13.25□□□□□ -0.29
FAM198B-204ENST00000587787 LAMC3Q9Y6N6 1575 aa13.23□□□□□ -0.29
FAM198B-204ENST00000587787 RBM42Q9BTD8 480 aaKnown RBP13.22□□□□□ -0.29
FAM198B-204ENST00000587787 MKRN4PQ13434 485 aaPredicted RBP13.21□□□□□ -0.29
FAM198B-204ENST00000587787 ZBTB12Q9Y330 459 aaPredicted RBP13.21□□□□□ -0.29
FAM198B-204ENST00000587787 ABCC8Q09428 1581 aa13.2□□□□□ -0.3
FAM198B-204ENST00000587787 FBLN2P98095 1184 aa13.2□□□□□ -0.3
FAM198B-204ENST00000587787 FANCD2Q9BXW9 1451 aa13.14□□□□□ -0.31
FAM198B-204ENST00000587787 KIF21AQ7Z4S6 1674 aa13.13□□□□□ -0.31
FAM198B-204ENST00000587787 WRNQ14191 1432 aaPredicted RBP eCLIP13.1□□□□□ -0.31
FAM198B-204ENST00000587787 SYNJ1O43426 1573 aa13.1□□□□□ -0.31
FAM198B-204ENST00000587787 PDS5BQ9NTI5 1447 aa13.09□□□□□ -0.31
FAM198B-204ENST00000587787 CEP164Q9UPV0 1460 aa13.08□□□□□ -0.32
FAM198B-204ENST00000587787 CUX1P39880 1505 aa13.07□□□□□ -0.32
FAM198B-204ENST00000587787 TRIM41Q8WV44 630 aa13.05□□□□□ -0.32
FAM198B-204ENST00000587787 BIVM-ERCC5R4GMW8 1640 aa13.05□□□□□ -0.32
FAM198B-204ENST00000587787 TOP2BQ02880 1626 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms