RNA–Protein interactions for RNA: ENST00000587539.1

ZNF404-202, Transcript of zinc finger protein 404, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZNF404, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404-202ENST00000587539 AEBP2Q6ZN18 517 aaPredicted RBP21.32■■□□□ 1
ZNF404-202ENST00000587539 CHIC1Q5VXU3 224 aa20.06■□□□□ 0.8
ZNF404-202ENST00000587539 SENP3Q9H4L4 574 aaPredicted RBP18.51■□□□□ 0.55
ZNF404-202ENST00000587539 PHF23Q9BUL5 403 aaPredicted RBP18.02■□□□□ 0.48
ZNF404-202ENST00000587539 POTEDQ86YR6 584 aa17.96■□□□□ 0.47
ZNF404-202ENST00000587539 FOXD1Q16676 465 aa17.27■□□□□ 0.35
ZNF404-202ENST00000587539 MSH5O43196 834 aa16.7■□□□□ 0.26
ZNF404-202ENST00000587539 PIAS4Q8N2W9 510 aaPredicted RBP15.91■□□□□ 0.14
ZNF404-202ENST00000587539 PPP6R1Q9UPN7 881 aa15.27■□□□□ 0.03
ZNF404-202ENST00000587539 ADRA2BP18089 450 aa15.16■□□□□ 0.02
ZNF404-202ENST00000587539 PLPPR3Q6T4P5 718 aa15.01□□□□□ -0.01
ZNF404-202ENST00000587539 CACNB1Q02641 598 aaPredicted RBP14.89□□□□□ -0.03
ZNF404-202ENST00000587539 DMRT2Q9Y5R5 561 aa14.48□□□□□ -0.09
ZNF404-202ENST00000587539 MAPK8IP2Q13387 824 aaPredicted RBP14.21□□□□□ -0.13
ZNF404-202ENST00000587539 RNF39Q9H2S5 420 aa14.08□□□□□ -0.16
ZNF404-202ENST00000587539 SCAF1Q9H7N4 1312 aaKnown RBP14.07□□□□□ -0.16
ZNF404-202ENST00000587539 POTEHQ6S545 545 aa13.89□□□□□ -0.19
ZNF404-202ENST00000587539 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
ZNF404-202ENST00000587539 DCAF8L1A6NGE4 600 aa13.85□□□□□ -0.19
ZNF404-202ENST00000587539 HOXD11P31277 338 aaPredicted RBP13.55□□□□□ -0.24
ZNF404-202ENST00000587539 DNAJC5BQ9UF47 199 aa13.42□□□□□ -0.26
ZNF404-202ENST00000587539 RNF216Q9NWF9 866 aaPredicted RBP13.18□□□□□ -0.3
ZNF404-202ENST00000587539 CNKSR2Q8WXI2 1034 aa13.02□□□□□ -0.32
ZNF404-202ENST00000587539 PPP4R3CPQ6ZMV5 832 aa12.96□□□□□ -0.33
ZNF404-202ENST00000587539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.87□□□□□ -0.35
ZNF404-202ENST00000587539 DSG3P32926 999 aa12.81□□□□□ -0.36
ZNF404-202ENST00000587539 CAPN15O75808 1086 aa12.62□□□□□ -0.39
ZNF404-202ENST00000587539 SP7Q8TDD2 431 aaPredicted RBP12.55□□□□□ -0.4
ZNF404-202ENST00000587539 SPINK5Q9NQ38 1064 aaPredicted RBP12.54□□□□□ -0.4
ZNF404-202ENST00000587539 U3KPZ7 1027 aaPredicted RBP12.46□□□□□ -0.42
ZNF404-202ENST00000587539 CHRDL2Q6WN34 429 aa12.42□□□□□ -0.42
ZNF404-202ENST00000587539 RBM42Q9BTD8 480 aaKnown RBP12.37□□□□□ -0.43
ZNF404-202ENST00000587539 NCBP3Q53F19 620 aaKnown RBP12.24□□□□□ -0.45
ZNF404-202ENST00000587539 ZNF219Q9P2Y4 722 aaPredicted RBP12.21□□□□□ -0.46
ZNF404-202ENST00000587539 APLP2Q06481 763 aa12.19□□□□□ -0.46
ZNF404-202ENST00000587539 ABCB7O75027 752 aa12.18□□□□□ -0.46
ZNF404-202ENST00000587539 TRHP20396 242 aaPredicted RBP12.14□□□□□ -0.47
ZNF404-202ENST00000587539 NPM3O75607 178 aaKnown RBP11.95□□□□□ -0.5
ZNF404-202ENST00000587539 HAX1O00165 279 aa11.93□□□□□ -0.5
ZNF404-202ENST00000587539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.89□□□□□ -0.51
ZNF404-202ENST00000587539 HNRNPUL2Q1KMD3 747 aaKnown RBP11.89□□□□□ -0.51
ZNF404-202ENST00000587539 PIP4P2Q8N4L2 257 aa11.87□□□□□ -0.51
ZNF404-202ENST00000587539 AKT1S1Q96B36 256 aa11.82□□□□□ -0.52
ZNF404-202ENST00000587539 PLSCR2Q9NRY7 297 aa11.82□□□□□ -0.52
ZNF404-202ENST00000587539 LHX8Q68G74 356 aa11.74□□□□□ -0.53
ZNF404-202ENST00000587539 SAMD1Q6SPF0 538 aaPredicted RBP11.74□□□□□ -0.53
ZNF404-202ENST00000587539 FXR2P51116 673 aaKnown RBP eCLIP11.67□□□□□ -0.54
ZNF404-202ENST00000587539 SLC4A2P04920 1241 aa11.66□□□□□ -0.54
ZNF404-202ENST00000587539 REM2Q8IYK8 340 aaPredicted RBP11.64□□□□□ -0.55
ZNF404-202ENST00000587539 EVX2Q03828 476 aa11.61□□□□□ -0.55
ZNF404-202ENST00000587539 POLA2Q14181 598 aa11.59□□□□□ -0.55
ZNF404-202ENST00000587539 PITPNM1O00562 1244 aa11.52□□□□□ -0.57
ZNF404-202ENST00000587539 ZBTB12Q9Y330 459 aaPredicted RBP11.44□□□□□ -0.58
ZNF404-202ENST00000587539 GABBR2O75899 941 aa11.39□□□□□ -0.59
ZNF404-202ENST00000587539 C19orf67A6NJJ6 358 aa11.34□□□□□ -0.59
ZNF404-202ENST00000587539 OSCARQ8IYS5 282 aa11.25□□□□□ -0.61
ZNF404-202ENST00000587539 PRKAR2AP13861 404 aaKnown RBP11.21□□□□□ -0.61
ZNF404-202ENST00000587539 MYCNP04198 464 aaPredicted RBP11.16□□□□□ -0.62
ZNF404-202ENST00000587539 PCDH10Q9P2E7 1040 aa11.12□□□□□ -0.63
ZNF404-202ENST00000587539 POTEMA6NI47 508 aa11.1□□□□□ -0.63
ZNF404-202ENST00000587539 POTEIP0CG38 1075 aa11.09□□□□□ -0.63
ZNF404-202ENST00000587539 CLCN6P51797 869 aa11.05□□□□□ -0.64
ZNF404-202ENST00000587539 POTEGQ6S5H5 508 aa11.02□□□□□ -0.64
ZNF404-202ENST00000587539 SPDYE1Q8NFV5 336 aaPredicted RBP11□□□□□ -0.65
ZNF404-202ENST00000587539 SPDYE2BA6NHP3 402 aa10.94□□□□□ -0.66
ZNF404-202ENST00000587539 SPDYE6P0CI01 402 aa10.94□□□□□ -0.66
ZNF404-202ENST00000587539 SPDYE2Q495Y8 402 aa10.94□□□□□ -0.66
ZNF404-202ENST00000587539 CLEC11AQ9Y240 323 aa10.93□□□□□ -0.66
ZNF404-202ENST00000587539 OTUD5Q96G74 571 aa10.91□□□□□ -0.66
ZNF404-202ENST00000587539 DCBLD2Q96PD2 775 aa10.9□□□□□ -0.66
ZNF404-202ENST00000587539 ATF5Q9Y2D1 282 aaPredicted RBP10.83□□□□□ -0.68
ZNF404-202ENST00000587539 CD44P16070 742 aaKnown RBP10.81□□□□□ -0.68
ZNF404-202ENST00000587539 CHADLQ6NUI6 762 aa10.78□□□□□ -0.68
ZNF404-202ENST00000587539 KCNA4P22459 653 aa10.74□□□□□ -0.69
ZNF404-202ENST00000587539 POTEB2H3BUK9 544 aa10.68□□□□□ -0.7
ZNF404-202ENST00000587539 PRR29P0C7W0 189 aa10.65□□□□□ -0.7
ZNF404-202ENST00000587539 FBLN2P98095 1184 aa10.64□□□□□ -0.71
ZNF404-202ENST00000587539 ZNF579Q8NAF0 562 aaKnown RBP10.64□□□□□ -0.71
ZNF404-202ENST00000587539 SSUH2Q9Y2M2 353 aa10.64□□□□□ -0.71
ZNF404-202ENST00000587539 FARP1Q9Y4F1 1045 aaPredicted RBP10.61□□□□□ -0.71
ZNF404-202ENST00000587539 ZNF692Q9BU19 519 aaPredicted RBP10.57□□□□□ -0.72
ZNF404-202ENST00000587539 LCE2DQ5TA82 110 aaPredicted RBP10.54□□□□□ -0.72
ZNF404-202ENST00000587539 MAMSTRQ6ZN01 415 aa10.54□□□□□ -0.72
ZNF404-202ENST00000587539 GALR2O43603 387 aaPredicted RBP10.49□□□□□ -0.73
ZNF404-202ENST00000587539 ZRANB1Q9UGI0 708 aa10.48□□□□□ -0.73
ZNF404-202ENST00000587539 FAM163AQ96GL9 167 aaPredicted RBP10.47□□□□□ -0.73
ZNF404-202ENST00000587539 FOXD4L1Q9NU39 408 aa10.46□□□□□ -0.74
ZNF404-202ENST00000587539 CDAN1Q8IWY9 1227 aa10.4□□□□□ -0.74
ZNF404-202ENST00000587539 SCUBE2Q9NQ36 999 aa10.37□□□□□ -0.75
ZNF404-202ENST00000587539 PABPN1Q86U42 306 aaKnown RBP eCLIP10.36□□□□□ -0.75
ZNF404-202ENST00000587539 METRNQ9UJH8 293 aa10.36□□□□□ -0.75
ZNF404-202ENST00000587539 POTEJP0CG39 1038 aa10.36□□□□□ -0.75
ZNF404-202ENST00000587539 C7P10643 843 aa10.36□□□□□ -0.75
ZNF404-202ENST00000587539 PELP1Q8IZL8 1130 aaKnown RBP10.36□□□□□ -0.75
ZNF404-202ENST00000587539 SLC39A7Q92504 469 aa10.36□□□□□ -0.75
ZNF404-202ENST00000587539 ATXN8OSP0DMR3 200 aa10.32□□□□□ -0.76
ZNF404-202ENST00000587539 MKRN4PQ13434 485 aaPredicted RBP10.32□□□□□ -0.76
ZNF404-202ENST00000587539 ASTLQ6HA08 431 aaPredicted RBP10.27□□□□□ -0.76
ZNF404-202ENST00000587539 PAK3O75914 559 aaPredicted RBP10.26□□□□□ -0.77
ZNF404-202ENST00000587539 MMRN1Q13201 1228 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms