RNA–Protein interactions for RNA: ENST00000587520.1

AC011474.3-201, humanhuman

TSL 5 BASIC

Gene AC011474.3, Length 250 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011474.3-201ENST00000587520 NISCHQ9Y2I1 1504 aa19.83■□□□□ 0.77
AC011474.3-201ENST00000587520 CCDC180Q9P1Z9 1646 aa17.22■□□□□ 0.35
AC011474.3-201ENST00000587520 ZCCHC6Q5VYS8 1495 aaKnown RBP16.67■□□□□ 0.26
AC011474.3-201ENST00000587520 DCAF1Q9Y4B6 1507 aa16.53■□□□□ 0.24
AC011474.3-201ENST00000587520 MYO15BQ96JP2 1530 aa16.33■□□□□ 0.2
AC011474.3-201ENST00000587520 DCAF8L2P0C7V8 631 aa16.23■□□□□ 0.19
AC011474.3-201ENST00000587520 NACADO15069 1562 aa16.09■□□□□ 0.17
AC011474.3-201ENST00000587520 ABCC9O60706 1549 aa16.05■□□□□ 0.16
AC011474.3-201ENST00000587520 SHROOM4Q9ULL8 1493 aa16.05■□□□□ 0.16
AC011474.3-201ENST00000587520 RB1CC1Q8TDY2 1594 aa15.87■□□□□ 0.13
AC011474.3-201ENST00000587520 SCRIBQ14160 1630 aa15.7■□□□□ 0.1
AC011474.3-201ENST00000587520 SUPT5HO00267 1087 aaKnown RBP15.6■□□□□ 0.09
AC011474.3-201ENST00000587520 RSF1Q96T23 1441 aaPredicted RBP15.43■□□□□ 0.06
AC011474.3-201ENST00000587520 BAZ1AQ9NRL2 1556 aaPredicted RBP15.32■□□□□ 0.04
AC011474.3-201ENST00000587520 UNC13AQ9UPW8 1703 aa15.31■□□□□ 0.04
AC011474.3-201ENST00000587520 CECR2Q9BXF3 1484 aa15.3■□□□□ 0.04
AC011474.3-201ENST00000587520 BICRAQ9NZM4 1560 aa15.28■□□□□ 0.04
AC011474.3-201ENST00000587520 MROH2BQ7Z745 1585 aa15.24■□□□□ 0.03
AC011474.3-201ENST00000587520 PABPN1Q86U42 306 aaKnown RBP eCLIP15.18■□□□□ 0.02
AC011474.3-201ENST00000587520 SMARCA4P51532 1647 aa15.15■□□□□ 0.02
AC011474.3-201ENST00000587520 CHIC1Q5VXU3 224 aa15.1■□□□□ 0.01
AC011474.3-201ENST00000587520 PEG3Q9GZU2 1588 aa15.07■□□□□ 0
AC011474.3-201ENST00000587520 WIZO95785 1651 aa15.05■□□□□ -0
AC011474.3-201ENST00000587520 TOP2AP11388 1531 aaKnown RBP15.03■□□□□ -0
AC011474.3-201ENST00000587520 SMARCA2P51531 1590 aa14.98□□□□□ -0.01
AC011474.3-201ENST00000587520 ATAD2BQ9ULI0 1458 aa14.95□□□□□ -0.02
AC011474.3-201ENST00000587520 CCDC88BA6NC98 1476 aa14.88□□□□□ -0.03
AC011474.3-201ENST00000587520 NCAPD3P42695 1498 aa14.87□□□□□ -0.03
AC011474.3-201ENST00000587520 EIF4G1Q04637 1599 aaKnown RBP14.85□□□□□ -0.03
AC011474.3-201ENST00000587520 BAZ1BQ9UIG0 1483 aaKnown RBP14.84□□□□□ -0.03
AC011474.3-201ENST00000587520 HMGXB3Q12766 1538 aa14.81□□□□□ -0.04
AC011474.3-201ENST00000587520 TRIM41Q8WV44 630 aa14.78□□□□□ -0.04
AC011474.3-201ENST00000587520 CC2D2AQ9P2K1 1620 aa14.55□□□□□ -0.08
AC011474.3-201ENST00000587520 CFTRP13569 1480 aa14.53□□□□□ -0.08
AC011474.3-201ENST00000587520 WRNQ14191 1432 aaPredicted RBP eCLIP14.53□□□□□ -0.08
AC011474.3-201ENST00000587520 EEA1Q15075 1411 aa14.52□□□□□ -0.08
AC011474.3-201ENST00000587520 CADPSQ9ULU8 1353 aa14.48□□□□□ -0.09
AC011474.3-201ENST00000587520 ABCC8Q09428 1581 aa14.45□□□□□ -0.1
AC011474.3-201ENST00000587520 LOC105371045A0A1W2PR82 267 aa14.42□□□□□ -0.1
AC011474.3-201ENST00000587520 TOP2BQ02880 1626 aa14.36□□□□□ -0.11
AC011474.3-201ENST00000587520 CSRNP3Q8WYN3 585 aa14.35□□□□□ -0.11
AC011474.3-201ENST00000587520 FAM9AQ8IZU1 332 aaPredicted RBP14.34□□□□□ -0.11
AC011474.3-201ENST00000587520 SYNJ1O43426 1573 aa14.33□□□□□ -0.12
AC011474.3-201ENST00000587520 BIVM-ERCC5R4GMW8 1640 aa14.31□□□□□ -0.12
AC011474.3-201ENST00000587520 PRDM2Q13029 1718 aa14.3□□□□□ -0.12
AC011474.3-201ENST00000587520 SOGA1O94964 1423 aa14.3□□□□□ -0.12
AC011474.3-201ENST00000587520 LAMC3Q9Y6N6 1575 aa14.28□□□□□ -0.12
AC011474.3-201ENST00000587520 CUX1P39880 1505 aa14.25□□□□□ -0.13
AC011474.3-201ENST00000587520 FANCD2Q9BXW9 1451 aa14.25□□□□□ -0.13
AC011474.3-201ENST00000587520 TNIKQ9UKE5 1360 aa14.24□□□□□ -0.13
AC011474.3-201ENST00000587520 PDS5BQ9NTI5 1447 aa14.24□□□□□ -0.13
AC011474.3-201ENST00000587520 CEP164Q9UPV0 1460 aa14.21□□□□□ -0.13
AC011474.3-201ENST00000587520 GOLGA3Q08378 1498 aa14.2□□□□□ -0.14
AC011474.3-201ENST00000587520 KIF27Q86VH2 1401 aa14.2□□□□□ -0.14
AC011474.3-201ENST00000587520 RUSC2Q8N2Y8 1516 aa14.18□□□□□ -0.14
AC011474.3-201ENST00000587520 KIF21BO75037 1637 aa14.17□□□□□ -0.14
AC011474.3-201ENST00000587520 DNMBPQ6XZF7 1577 aa14.13□□□□□ -0.15
AC011474.3-201ENST00000587520 UBTFP17480 764 aaKnown RBP14.11□□□□□ -0.15
AC011474.3-201ENST00000587520 NESP48681 1621 aa14.11□□□□□ -0.15
AC011474.3-201ENST00000587520 PRXQ9BXM0 1461 aa14.11□□□□□ -0.15
AC011474.3-201ENST00000587520 ERICH3Q5RHP9 1530 aa14.1□□□□□ -0.15
AC011474.3-201ENST00000587520 FGD5Q6ZNL6 1462 aa14.09□□□□□ -0.15
AC011474.3-201ENST00000587520 TOPBP1Q92547 1522 aa14.09□□□□□ -0.15
AC011474.3-201ENST00000587520 CEP162Q5TB80 1403 aa14.07□□□□□ -0.16
AC011474.3-201ENST00000587520 ABCA10Q8WWZ4 1543 aa14.05□□□□□ -0.16
AC011474.3-201ENST00000587520 DNAJC5BQ9UF47 199 aa14.05□□□□□ -0.16
AC011474.3-201ENST00000587520 IGF1RP08069 1367 aa14.05□□□□□ -0.16
AC011474.3-201ENST00000587520 CUX2O14529 1486 aa14.04□□□□□ -0.16
AC011474.3-201ENST00000587520 TRIM26Q12899 539 aaPredicted RBP14.03□□□□□ -0.16
AC011474.3-201ENST00000587520 POLA1P09884 1462 aaPredicted RBP14.02□□□□□ -0.16
AC011474.3-201ENST00000587520 URB2Q14146 1524 aaKnown RBP14.01□□□□□ -0.17
AC011474.3-201ENST00000587520 RAPGEF2Q9Y4G8 1499 aa14□□□□□ -0.17
AC011474.3-201ENST00000587520 EHMT2Q96KQ7 1210 aa14□□□□□ -0.17
AC011474.3-201ENST00000587520 CARMIL1Q5VZK9 1371 aa13.97□□□□□ -0.17
AC011474.3-201ENST00000587520 MRC2Q9UBG0 1479 aa13.97□□□□□ -0.17
AC011474.3-201ENST00000587520 CLIP1P30622 1438 aa13.96□□□□□ -0.18
AC011474.3-201ENST00000587520 RAD54L2Q9Y4B4 1467 aa13.92□□□□□ -0.18
AC011474.3-201ENST00000587520 PCGF6Q9BYE7 350 aa13.91□□□□□ -0.18
AC011474.3-201ENST00000587520 KIF21AQ7Z4S6 1674 aa13.88□□□□□ -0.19
AC011474.3-201ENST00000587520 CUL7Q14999 1698 aa13.88□□□□□ -0.19
AC011474.3-201ENST00000587520 WDR97A6NE52 1622 aa13.87□□□□□ -0.19
AC011474.3-201ENST00000587520 WDR62O43379 1518 aa13.87□□□□□ -0.19
AC011474.3-201ENST00000587520 VPS8Q8N3P4 1428 aa13.87□□□□□ -0.19
AC011474.3-201ENST00000587520 GAPVD1Q14C86 1478 aa13.87□□□□□ -0.19
AC011474.3-201ENST00000587520 IFT140Q96RY7 1462 aa13.87□□□□□ -0.19
AC011474.3-201ENST00000587520 TARBP1Q13395 1621 aaKnown RBP13.83□□□□□ -0.2
AC011474.3-201ENST00000587520 ABCA5Q8WWZ7 1642 aa13.83□□□□□ -0.2
AC011474.3-201ENST00000587520 ERCC6Q03468 1493 aa13.82□□□□□ -0.2
AC011474.3-201ENST00000587520 TDRD9Q8NDG6 1382 aaKnown RBP13.82□□□□□ -0.2
AC011474.3-201ENST00000587520 APLP2Q06481 763 aa13.81□□□□□ -0.2
AC011474.3-201ENST00000587520 FHAD1B1AJZ9 1412 aa13.77□□□□□ -0.21
AC011474.3-201ENST00000587520 GRIN2BQ13224 1484 aa13.77□□□□□ -0.21
AC011474.3-201ENST00000587520 ARAP1Q96P48 1450 aa13.74□□□□□ -0.21
AC011474.3-201ENST00000587520 ARHGAP35Q9NRY4 1499 aa13.74□□□□□ -0.21
AC011474.3-201ENST00000587520 EFCAB5A4FU69 1503 aa13.73□□□□□ -0.21
AC011474.3-201ENST00000587520 THOC2Q8NI27 1593 aaKnown RBP13.71□□□□□ -0.21
AC011474.3-201ENST00000587520 MAP3K1Q13233 1512 aa13.71□□□□□ -0.21
AC011474.3-201ENST00000587520 HRCP23327 699 aa13.7□□□□□ -0.22
AC011474.3-201ENST00000587520 AQRO60306 1485 aaKnown RBP eCLIP13.69□□□□□ -0.22
AC011474.3-201ENST00000587520 ZEB1P37275 1124 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms