RNA–Protein interactions for RNA: ENST00000587206.1

ABCA8-209, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 5

Gene ABCA8, Length 925 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-209ENST00000587206 AEBP2Q6ZN18 517 aaPredicted RBP24.7■■□□□ 1.54
ABCA8-209ENST00000587206 CHIC1Q5VXU3 224 aa23.55■■□□□ 1.36
ABCA8-209ENST00000587206 SENP3Q9H4L4 574 aaPredicted RBP20.96■□□□□ 0.95
ABCA8-209ENST00000587206 PHF23Q9BUL5 403 aaPredicted RBP20.77■□□□□ 0.92
ABCA8-209ENST00000587206 FOXD1Q16676 465 aa19.59■□□□□ 0.73
ABCA8-209ENST00000587206 PLPPR3Q6T4P5 718 aa18.86■□□□□ 0.61
ABCA8-209ENST00000587206 PPP6R1Q9UPN7 881 aa18.48■□□□□ 0.55
ABCA8-209ENST00000587206 ADRA2BP18089 450 aa18.43■□□□□ 0.54
ABCA8-209ENST00000587206 PIAS4Q8N2W9 510 aaPredicted RBP18.32■□□□□ 0.52
ABCA8-209ENST00000587206 MSH5O43196 834 aa18.18■□□□□ 0.5
ABCA8-209ENST00000587206 POTEDQ86YR6 584 aa17.56■□□□□ 0.4
ABCA8-209ENST00000587206 MAPK8IP2Q13387 824 aaPredicted RBP16.9■□□□□ 0.3
ABCA8-209ENST00000587206 SCAF1Q9H7N4 1312 aaKnown RBP16.75■□□□□ 0.27
ABCA8-209ENST00000587206 DMRT2Q9Y5R5 561 aa16.67■□□□□ 0.26
ABCA8-209ENST00000587206 PPP4R3CPQ6ZMV5 832 aa16.6■□□□□ 0.25
ABCA8-209ENST00000587206 CNKSR2Q8WXI2 1034 aa16.21■□□□□ 0.19
ABCA8-209ENST00000587206 HOXD11P31277 338 aaPredicted RBP16.1■□□□□ 0.17
ABCA8-209ENST00000587206 DCAF8L1A6NGE4 600 aa16.04■□□□□ 0.16
ABCA8-209ENST00000587206 RNF216Q9NWF9 866 aaPredicted RBP16.02■□□□□ 0.16
ABCA8-209ENST00000587206 NCBP3Q53F19 620 aaKnown RBP15.95■□□□□ 0.14
ABCA8-209ENST00000587206 NPM3O75607 178 aaKnown RBP15.78■□□□□ 0.12
ABCA8-209ENST00000587206 KCNA4P22459 653 aa15.65■□□□□ 0.1
ABCA8-209ENST00000587206 CACNB1Q02641 598 aaPredicted RBP15.57■□□□□ 0.08
ABCA8-209ENST00000587206 RNF39Q9H2S5 420 aa15.57■□□□□ 0.08
ABCA8-209ENST00000587206 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
ABCA8-209ENST00000587206 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.38■□□□□ 0.05
ABCA8-209ENST00000587206 C1QBPQ07021 282 aaKnown RBP15.32■□□□□ 0.04
ABCA8-209ENST00000587206 U3KPZ7 1027 aaPredicted RBP15.07■□□□□ 0
ABCA8-209ENST00000587206 SLC4A2P04920 1241 aa15.04■□□□□ -0
ABCA8-209ENST00000587206 SPINK5Q9NQ38 1064 aaPredicted RBP14.85□□□□□ -0.03
ABCA8-209ENST00000587206 CAPN15O75808 1086 aa14.79□□□□□ -0.04
ABCA8-209ENST00000587206 SLC4A1APQ9BWU0 796 aaKnown RBP14.77□□□□□ -0.05
ABCA8-209ENST00000587206 DSG3P32926 999 aa14.65□□□□□ -0.06
ABCA8-209ENST00000587206 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.61□□□□□ -0.07
ABCA8-209ENST00000587206 TRHP20396 242 aaPredicted RBP14.61□□□□□ -0.07
ABCA8-209ENST00000587206 HNRNPUL2Q1KMD3 747 aaKnown RBP14.61□□□□□ -0.07
ABCA8-209ENST00000587206 APLP2Q06481 763 aa14.57□□□□□ -0.08
ABCA8-209ENST00000587206 SAMD1Q6SPF0 538 aaPredicted RBP14.56□□□□□ -0.08
ABCA8-209ENST00000587206 MYCNP04198 464 aaPredicted RBP14.54□□□□□ -0.08
ABCA8-209ENST00000587206 ABCB7O75027 752 aa14.49□□□□□ -0.09
ABCA8-209ENST00000587206 FOXD4L1Q9NU39 408 aa14.49□□□□□ -0.09
ABCA8-209ENST00000587206 ZNF219Q9P2Y4 722 aaPredicted RBP14.49□□□□□ -0.09
ABCA8-209ENST00000587206 ZBTB22O15209 634 aa14.41□□□□□ -0.1
ABCA8-209ENST00000587206 ATF5Q9Y2D1 282 aaPredicted RBP14.3□□□□□ -0.12
ABCA8-209ENST00000587206 POLA2Q14181 598 aa14.24□□□□□ -0.13
ABCA8-209ENST00000587206 ATXN8OSP0DMR3 200 aa13.99□□□□□ -0.17
ABCA8-209ENST00000587206 RBM42Q9BTD8 480 aaKnown RBP13.9□□□□□ -0.18
ABCA8-209ENST00000587206 CSRNP3Q8WYN3 585 aa13.87□□□□□ -0.19
ABCA8-209ENST00000587206 ZBTB12Q9Y330 459 aaPredicted RBP13.86□□□□□ -0.19
ABCA8-209ENST00000587206 EHMT2Q96KQ7 1210 aa13.8□□□□□ -0.2
ABCA8-209ENST00000587206 POTEHQ6S545 545 aa13.78□□□□□ -0.2
ABCA8-209ENST00000587206 OSCARQ8IYS5 282 aa13.78□□□□□ -0.2
ABCA8-209ENST00000587206 AKT1S1Q96B36 256 aa13.65□□□□□ -0.22
ABCA8-209ENST00000587206 FBLN2P98095 1184 aa13.64□□□□□ -0.23
ABCA8-209ENST00000587206 MKRN4PQ13434 485 aaPredicted RBP13.62□□□□□ -0.23
ABCA8-209ENST00000587206 CHRDL2Q6WN34 429 aa13.6□□□□□ -0.23
ABCA8-209ENST00000587206 REM2Q8IYK8 340 aaPredicted RBP13.57□□□□□ -0.24
ABCA8-209ENST00000587206 SPDYE2BA6NHP3 402 aa13.48□□□□□ -0.25
ABCA8-209ENST00000587206 SPDYE6P0CI01 402 aa13.48□□□□□ -0.25
ABCA8-209ENST00000587206 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
ABCA8-209ENST00000587206 PITPNM1O00562 1244 aa13.42□□□□□ -0.26
ABCA8-209ENST00000587206 ZNF692Q9BU19 519 aaPredicted RBP13.39□□□□□ -0.27
ABCA8-209ENST00000587206 PIP4P2Q8N4L2 257 aa13.33□□□□□ -0.28
ABCA8-209ENST00000587206 SSUH2Q9Y2M2 353 aa13.33□□□□□ -0.28
ABCA8-209ENST00000587206 FXR2P51116 673 aaKnown RBP eCLIP13.25□□□□□ -0.29
ABCA8-209ENST00000587206 CLEC11AQ9Y240 323 aa13.25□□□□□ -0.29
ABCA8-209ENST00000587206 PABPN1Q86U42 306 aaKnown RBP eCLIP13.21□□□□□ -0.29
ABCA8-209ENST00000587206 SPDYE1Q8NFV5 336 aaPredicted RBP13.21□□□□□ -0.29
ABCA8-209ENST00000587206 PRKAR2AP13861 404 aaKnown RBP13.08□□□□□ -0.32
ABCA8-209ENST00000587206 HAX1O00165 279 aa13.06□□□□□ -0.32
ABCA8-209ENST00000587206 SPDYE4A6NLX3 237 aa13.03□□□□□ -0.32
ABCA8-209ENST00000587206 PRR29P0C7W0 189 aa13.02□□□□□ -0.33
ABCA8-209ENST00000587206 CHADLQ6NUI6 762 aa13.01□□□□□ -0.33
ABCA8-209ENST00000587206 SP7Q8TDD2 431 aaPredicted RBP12.98□□□□□ -0.33
ABCA8-209ENST00000587206 EVX2Q03828 476 aa12.96□□□□□ -0.33
ABCA8-209ENST00000587206 C19orf67A6NJJ6 358 aa12.82□□□□□ -0.36
ABCA8-209ENST00000587206 STAG3Q9UJ98 1225 aa12.81□□□□□ -0.36
ABCA8-209ENST00000587206 FARP1Q9Y4F1 1045 aaPredicted RBP12.78□□□□□ -0.36
ABCA8-209ENST00000587206 CREBZFQ9NS37 354 aa12.75□□□□□ -0.37
ABCA8-209ENST00000587206 PROM2Q8N271 834 aa12.7□□□□□ -0.38
ABCA8-209ENST00000587206 CD44P16070 742 aaKnown RBP12.66□□□□□ -0.38
ABCA8-209ENST00000587206 SLC24A1O60721 1099 aa12.63□□□□□ -0.39
ABCA8-209ENST00000587206 GABBR2O75899 941 aa12.62□□□□□ -0.39
ABCA8-209ENST00000587206 FKBP8Q14318 412 aa12.56□□□□□ -0.4
ABCA8-209ENST00000587206 MNX1P50219 401 aaPredicted RBP12.55□□□□□ -0.4
ABCA8-209ENST00000587206 ZRANB1Q9UGI0 708 aa12.53□□□□□ -0.4
ABCA8-209ENST00000587206 NPM1P06748 294 aaKnown RBP eCLIP12.47□□□□□ -0.41
ABCA8-209ENST00000587206 MIER1Q8N108 512 aa12.44□□□□□ -0.42
ABCA8-209ENST00000587206 ZNF579Q8NAF0 562 aaKnown RBP12.44□□□□□ -0.42
ABCA8-209ENST00000587206 PAK3O75914 559 aaPredicted RBP12.4□□□□□ -0.42
ABCA8-209ENST00000587206 PHF12Q96QT6 1004 aa12.38□□□□□ -0.43
ABCA8-209ENST00000587206 POTEIP0CG38 1075 aa12.37□□□□□ -0.43
ABCA8-209ENST00000587206 CLCN6P51797 869 aa12.35□□□□□ -0.43
ABCA8-209ENST00000587206 GALR2O43603 387 aaPredicted RBP12.34□□□□□ -0.43
ABCA8-209ENST00000587206 PLCD3Q8N3E9 789 aa12.34□□□□□ -0.43
ABCA8-209ENST00000587206 PLEKHG5O94827 1062 aa12.33□□□□□ -0.44
ABCA8-209ENST00000587206 TSPYL2Q9H2G4 693 aaPredicted RBP12.33□□□□□ -0.44
ABCA8-209ENST00000587206 DCBLD2Q96PD2 775 aa12.29□□□□□ -0.44
ABCA8-209ENST00000587206 RASEFQ8IZ41 740 aa12.25□□□□□ -0.45
ABCA8-209ENST00000587206 CCDC61Q9Y6R9 512 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms