RNA–Protein interactions for RNA: ENST00000583958.1

MED13-206, Transcript of mediator complex subunit 13, humanhuman

TSL 1 (best)

Gene MED13, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED13-206ENST00000583958 AEBP2Q6ZN18 517 aaPredicted RBP30.18■■■□□ 2.42
MED13-206ENST00000583958 CHIC1Q5VXU3 224 aa28.88■■■□□ 2.21
MED13-206ENST00000583958 SENP3Q9H4L4 574 aaPredicted RBP25.8■■□□□ 1.72
MED13-206ENST00000583958 PHF23Q9BUL5 403 aaPredicted RBP25.44■■□□□ 1.66
MED13-206ENST00000583958 FOXD1Q16676 465 aa23.96■■□□□ 1.43
MED13-206ENST00000583958 PLPPR3Q6T4P5 718 aa23.2■■□□□ 1.3
MED13-206ENST00000583958 PPP6R1Q9UPN7 881 aa22.51■■□□□ 1.19
MED13-206ENST00000583958 PIAS4Q8N2W9 510 aaPredicted RBP22.49■■□□□ 1.19
MED13-206ENST00000583958 ADRA2BP18089 450 aa22.48■■□□□ 1.19
MED13-206ENST00000583958 MSH5O43196 834 aa22.42■■□□□ 1.18
MED13-206ENST00000583958 POTEDQ86YR6 584 aa21.51■■□□□ 1.03
MED13-206ENST00000583958 SCAF1Q9H7N4 1312 aaKnown RBP20.65■□□□□ 0.9
MED13-206ENST00000583958 MAPK8IP2Q13387 824 aaPredicted RBP20.57■□□□□ 0.88
MED13-206ENST00000583958 DMRT2Q9Y5R5 561 aa20.46■□□□□ 0.87
MED13-206ENST00000583958 PPP4R3CPQ6ZMV5 832 aa20.34■□□□□ 0.85
MED13-206ENST00000583958 CNKSR2Q8WXI2 1034 aa19.93■□□□□ 0.78
MED13-206ENST00000583958 HOXD11P31277 338 aaPredicted RBP19.77■□□□□ 0.76
MED13-206ENST00000583958 RNF216Q9NWF9 866 aaPredicted RBP19.69■□□□□ 0.74
MED13-206ENST00000583958 NCBP3Q53F19 620 aaKnown RBP19.67■□□□□ 0.74
MED13-206ENST00000583958 DCAF8L1A6NGE4 600 aa19.66■□□□□ 0.74
MED13-206ENST00000583958 NPM3O75607 178 aaKnown RBP19.31■□□□□ 0.68
MED13-206ENST00000583958 KCNA4P22459 653 aa19.11■□□□□ 0.65
MED13-206ENST00000583958 CACNB1Q02641 598 aaPredicted RBP19.11■□□□□ 0.65
MED13-206ENST00000583958 RNF39Q9H2S5 420 aa19.1■□□□□ 0.65
MED13-206ENST00000583958 DNAJC5BQ9UF47 199 aa19.07■□□□□ 0.64
MED13-206ENST00000583958 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.88■□□□□ 0.61
MED13-206ENST00000583958 C1QBPQ07021 282 aaKnown RBP18.86■□□□□ 0.61
MED13-206ENST00000583958 U3KPZ7 1027 aaPredicted RBP18.47■□□□□ 0.55
MED13-206ENST00000583958 SLC4A2P04920 1241 aa18.37■□□□□ 0.53
MED13-206ENST00000583958 CAPN15O75808 1086 aa18.15■□□□□ 0.5
MED13-206ENST00000583958 SPINK5Q9NQ38 1064 aaPredicted RBP18.13■□□□□ 0.49
MED13-206ENST00000583958 SLC4A1APQ9BWU0 796 aaKnown RBP18.12■□□□□ 0.49
MED13-206ENST00000583958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.08■□□□□ 0.48
MED13-206ENST00000583958 HNRNPUL2Q1KMD3 747 aaKnown RBP18.08■□□□□ 0.48
MED13-206ENST00000583958 APLP2Q06481 763 aa18.07■□□□□ 0.48
MED13-206ENST00000583958 SAMD1Q6SPF0 538 aaPredicted RBP17.97■□□□□ 0.47
MED13-206ENST00000583958 DSG3P32926 999 aa17.95■□□□□ 0.46
MED13-206ENST00000583958 MYCNP04198 464 aaPredicted RBP17.91■□□□□ 0.46
MED13-206ENST00000583958 ZNF219Q9P2Y4 722 aaPredicted RBP17.9■□□□□ 0.46
MED13-206ENST00000583958 TRHP20396 242 aaPredicted RBP17.89■□□□□ 0.45
MED13-206ENST00000583958 FOXD4L1Q9NU39 408 aa17.82■□□□□ 0.44
MED13-206ENST00000583958 ABCB7O75027 752 aa17.72■□□□□ 0.43
MED13-206ENST00000583958 ZBTB22O15209 634 aa17.54■□□□□ 0.4
MED13-206ENST00000583958 POLA2Q14181 598 aa17.43■□□□□ 0.38
MED13-206ENST00000583958 ATF5Q9Y2D1 282 aaPredicted RBP17.4■□□□□ 0.38
MED13-206ENST00000583958 ATXN8OSP0DMR3 200 aa17.25■□□□□ 0.35
MED13-206ENST00000583958 RBM42Q9BTD8 480 aaKnown RBP17.2■□□□□ 0.34
MED13-206ENST00000583958 ZBTB12Q9Y330 459 aaPredicted RBP17.16■□□□□ 0.34
MED13-206ENST00000583958 CSRNP3Q8WYN3 585 aa16.92■□□□□ 0.3
MED13-206ENST00000583958 POTEHQ6S545 545 aa16.91■□□□□ 0.3
MED13-206ENST00000583958 OSCARQ8IYS5 282 aa16.89■□□□□ 0.29
MED13-206ENST00000583958 EHMT2Q96KQ7 1210 aa16.85■□□□□ 0.29
MED13-206ENST00000583958 FBLN2P98095 1184 aa16.82■□□□□ 0.28
MED13-206ENST00000583958 AKT1S1Q96B36 256 aa16.8■□□□□ 0.28
MED13-206ENST00000583958 CHRDL2Q6WN34 429 aa16.7■□□□□ 0.26
MED13-206ENST00000583958 MKRN4PQ13434 485 aaPredicted RBP16.62■□□□□ 0.25
MED13-206ENST00000583958 REM2Q8IYK8 340 aaPredicted RBP16.62■□□□□ 0.25
MED13-206ENST00000583958 SPDYE2BA6NHP3 402 aa16.61■□□□□ 0.25
MED13-206ENST00000583958 SPDYE6P0CI01 402 aa16.61■□□□□ 0.25
MED13-206ENST00000583958 SPDYE2Q495Y8 402 aa16.61■□□□□ 0.25
MED13-206ENST00000583958 PITPNM1O00562 1244 aa16.45■□□□□ 0.22
MED13-206ENST00000583958 ZNF692Q9BU19 519 aaPredicted RBP16.44■□□□□ 0.22
MED13-206ENST00000583958 SSUH2Q9Y2M2 353 aa16.38■□□□□ 0.21
MED13-206ENST00000583958 PIP4P2Q8N4L2 257 aa16.33■□□□□ 0.2
MED13-206ENST00000583958 SPDYE1Q8NFV5 336 aaPredicted RBP16.29■□□□□ 0.2
MED13-206ENST00000583958 FXR2P51116 673 aaKnown RBP eCLIP16.26■□□□□ 0.191e-6■■■□□ 15
MED13-206ENST00000583958 CLEC11AQ9Y240 323 aa16.24■□□□□ 0.19
MED13-206ENST00000583958 PABPN1Q86U42 306 aaKnown RBP eCLIP16.19■□□□□ 0.18
MED13-206ENST00000583958 PRKAR2AP13861 404 aaKnown RBP16.04■□□□□ 0.16
MED13-206ENST00000583958 HAX1O00165 279 aa16.01■□□□□ 0.15
MED13-206ENST00000583958 PRR29P0C7W0 189 aa16■□□□□ 0.15
MED13-206ENST00000583958 SPDYE4A6NLX3 237 aa15.99■□□□□ 0.15
MED13-206ENST00000583958 SP7Q8TDD2 431 aaPredicted RBP15.95■□□□□ 0.14
MED13-206ENST00000583958 CHADLQ6NUI6 762 aa15.88■□□□□ 0.13
MED13-206ENST00000583958 STAG3Q9UJ98 1225 aa15.82■□□□□ 0.12
MED13-206ENST00000583958 EVX2Q03828 476 aa15.74■□□□□ 0.11
MED13-206ENST00000583958 C19orf67A6NJJ6 358 aa15.73■□□□□ 0.11
MED13-206ENST00000583958 FARP1Q9Y4F1 1045 aaPredicted RBP15.67■□□□□ 0.1
MED13-206ENST00000583958 CREBZFQ9NS37 354 aa15.6■□□□□ 0.09
MED13-206ENST00000583958 PROM2Q8N271 834 aa15.59■□□□□ 0.09
MED13-206ENST00000583958 CD44P16070 742 aaKnown RBP15.56■□□□□ 0.08
MED13-206ENST00000583958 GABBR2O75899 941 aa15.45■□□□□ 0.06
MED13-206ENST00000583958 NPM1P06748 294 aaKnown RBP eCLIP15.39■□□□□ 0.05
MED13-206ENST00000583958 FKBP8Q14318 412 aa15.39■□□□□ 0.05
MED13-206ENST00000583958 ZRANB1Q9UGI0 708 aa15.37■□□□□ 0.05
MED13-206ENST00000583958 MNX1P50219 401 aaPredicted RBP15.34■□□□□ 0.05
MED13-206ENST00000583958 PAK3O75914 559 aaPredicted RBP15.33■□□□□ 0.04
MED13-206ENST00000583958 CLCN6P51797 869 aa15.33■□□□□ 0.04
MED13-206ENST00000583958 ZNF579Q8NAF0 562 aaKnown RBP15.31■□□□□ 0.04
MED13-206ENST00000583958 PLEKHG5O94827 1062 aa15.28■□□□□ 0.04
MED13-206ENST00000583958 MIER1Q8N108 512 aa15.23■□□□□ 0.03
MED13-206ENST00000583958 NISCHQ9Y2I1 1504 aa15.22■□□□□ 0.03
MED13-206ENST00000583958 PLCD3Q8N3E9 789 aa15.17■□□□□ 0.02
MED13-206ENST00000583958 PHF12Q96QT6 1004 aa15.15■□□□□ 0.02
MED13-206ENST00000583958 DCBLD2Q96PD2 775 aa15.12■□□□□ 0.01
MED13-206ENST00000583958 GALR2O43603 387 aaPredicted RBP15.09■□□□□ 0.01
MED13-206ENST00000583958 TSPYL2Q9H2G4 693 aaPredicted RBP15.09■□□□□ 0.01
MED13-206ENST00000583958 POTEIP0CG38 1075 aa15.08■□□□□ 0
MED13-206ENST00000583958 ZBTB47Q9UFB7 747 aaPredicted RBP15.07■□□□□ 0
MED13-206ENST00000583958 FBXO3Q9UK99 471 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms