RNA–Protein interactions for RNA: ENST00000583030.1

AC005562.1-201, humanhuman

BASIC

Gene AC005562.1, Length 3,219 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005562.1-201ENST00000583030 NISCHQ9Y2I1 1504 aa28.87■■■□□ 2.21
AC005562.1-201ENST00000583030 SHROOM4Q9ULL8 1493 aa25.41■■□□□ 1.66
AC005562.1-201ENST00000583030 DCAF8L2P0C7V8 631 aa25.22■■□□□ 1.63
AC005562.1-201ENST00000583030 SUPT5HO00267 1087 aaKnown RBP24.79■■□□□ 1.56
AC005562.1-201ENST00000583030 ZCCHC6Q5VYS8 1495 aaKnown RBP24.27■■□□□ 1.48
AC005562.1-201ENST00000583030 CCDC180Q9P1Z9 1646 aa24.27■■□□□ 1.48
AC005562.1-201ENST00000583030 HRCP23327 699 aa23.65■■□□□ 1.38
AC005562.1-201ENST00000583030 ABCC9O60706 1549 aa23.64■■□□□ 1.38
AC005562.1-201ENST00000583030 PPARGC1BQ86YN6 1023 aaKnown RBP23.54■■□□□ 1.36
AC005562.1-201ENST00000583030 PCGF6Q9BYE7 350 aa23.5■■□□□ 1.35
AC005562.1-201ENST00000583030 CHIC1Q5VXU3 224 aa23.5■■□□□ 1.35
AC005562.1-201ENST00000583030 SCRIBQ14160 1630 aa23.42■■□□□ 1.34
AC005562.1-201ENST00000583030 MYO15BQ96JP2 1530 aa23.34■■□□□ 1.33
AC005562.1-201ENST00000583030 EHMT2Q96KQ7 1210 aa23.29■■□□□ 1.32
AC005562.1-201ENST00000583030 DCAF1Q9Y4B6 1507 aa23.22■■□□□ 1.31
AC005562.1-201ENST00000583030 LOC105371045A0A1W2PR82 267 aa23.18■■□□□ 1.3
AC005562.1-201ENST00000583030 FAM9AQ8IZU1 332 aaPredicted RBP23.09■■□□□ 1.29
AC005562.1-201ENST00000583030 PELP1Q8IZL8 1130 aaKnown RBP22.94■■□□□ 1.26
AC005562.1-201ENST00000583030 RSF1Q96T23 1441 aaPredicted RBP22.9■■□□□ 1.26
AC005562.1-201ENST00000583030 CECR2Q9BXF3 1484 aa22.87■■□□□ 1.25
AC005562.1-201ENST00000583030 PABPN1Q86U42 306 aaKnown RBP eCLIP22.83■■□□□ 1.25
AC005562.1-201ENST00000583030 TRIM41Q8WV44 630 aa22.82■■□□□ 1.24
AC005562.1-201ENST00000583030 RB1CC1Q8TDY2 1594 aa22.71■■□□□ 1.23
AC005562.1-201ENST00000583030 NACADO15069 1562 aa22.68■■□□□ 1.22
AC005562.1-201ENST00000583030 MROH2BQ7Z745 1585 aa22.63■■□□□ 1.21
AC005562.1-201ENST00000583030 SCAF1Q9H7N4 1312 aaKnown RBP22.57■■□□□ 1.2
AC005562.1-201ENST00000583030 WIZO95785 1651 aa22.52■■□□□ 1.2
AC005562.1-201ENST00000583030 TTBK1Q5TCY1 1321 aaPredicted RBP22.38■■□□□ 1.17
AC005562.1-201ENST00000583030 TRIM26Q12899 539 aaPredicted RBP22.36■■□□□ 1.17
AC005562.1-201ENST00000583030 UNC13AQ9UPW8 1703 aa22.15■■□□□ 1.14
AC005562.1-201ENST00000583030 BAZ1AQ9NRL2 1556 aaPredicted RBP22.15■■□□□ 1.14
AC005562.1-201ENST00000583030 ZEB1P37275 1124 aaPredicted RBP22.14■■□□□ 1.14
AC005562.1-201ENST00000583030 ABCC8Q09428 1581 aa22.11■■□□□ 1.13
AC005562.1-201ENST00000583030 RANGAP1P46060 587 aaPredicted RBP22.08■■□□□ 1.13
AC005562.1-201ENST00000583030 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
AC005562.1-201ENST00000583030 MYT1Q01538 1121 aa22.02■■□□□ 1.12
AC005562.1-201ENST00000583030 SMARCA4P51532 1647 aa22.02■■□□□ 1.12
AC005562.1-201ENST00000583030 GTF3C3Q9Y5Q9 886 aa21.98■■□□□ 1.11
AC005562.1-201ENST00000583030 NEUROD1Q13562 356 aa21.97■■□□□ 1.11
AC005562.1-201ENST00000583030 ACIN1Q9UKV3 1341 aaKnown RBP21.94■■□□□ 1.1
AC005562.1-201ENST00000583030 UBTFP17480 764 aaKnown RBP21.93■■□□□ 1.1
AC005562.1-201ENST00000583030 BICRAQ9NZM4 1560 aa21.92■■□□□ 1.1
AC005562.1-201ENST00000583030 TOP2AP11388 1531 aaKnown RBP21.88■■□□□ 1.09
AC005562.1-201ENST00000583030 SOGA1O94964 1423 aa21.86■■□□□ 1.09
AC005562.1-201ENST00000583030 SMARCA2P51531 1590 aa21.84■■□□□ 1.09
AC005562.1-201ENST00000583030 CENPBP07199 599 aaPredicted RBP21.8■■□□□ 1.08
AC005562.1-201ENST00000583030 RUSC2Q8N2Y8 1516 aa21.8■■□□□ 1.08
AC005562.1-201ENST00000583030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.72■■□□□ 1.07
AC005562.1-201ENST00000583030 YTHDC1Q96MU7 727 aaKnown RBP21.72■■□□□ 1.07
AC005562.1-201ENST00000583030 CCER1Q8TC90 406 aaPredicted RBP21.71■■□□□ 1.07
AC005562.1-201ENST00000583030 CSRNP3Q8WYN3 585 aa21.68■■□□□ 1.06
AC005562.1-201ENST00000583030 BAZ1BQ9UIG0 1483 aaKnown RBP21.66■■□□□ 1.06
AC005562.1-201ENST00000583030 EIF4G1Q04637 1599 aaKnown RBP21.65■■□□□ 1.06
AC005562.1-201ENST00000583030 DIEXFQ68CQ4 756 aaKnown RBP21.64■■□□□ 1.05
AC005562.1-201ENST00000583030 ATAD2BQ9ULI0 1458 aa21.63■■□□□ 1.05
AC005562.1-201ENST00000583030 WRNQ14191 1432 aaPredicted RBP eCLIP21.59■■□□□ 1.05
AC005562.1-201ENST00000583030 CEP162Q5TB80 1403 aa21.51■■□□□ 1.03
AC005562.1-201ENST00000583030 SYNJ1O43426 1573 aa21.43■■□□□ 1.02
AC005562.1-201ENST00000583030 HNRNPUL2Q1KMD3 747 aaKnown RBP21.4■■□□□ 1.02
AC005562.1-201ENST00000583030 TNIKQ9UKE5 1360 aa21.3■■□□□ 1
AC005562.1-201ENST00000583030 APLP2Q06481 763 aa21.28■■□□□ 1
AC005562.1-201ENST00000583030 PEG3Q9GZU2 1588 aa21.28■■□□□ 1
AC005562.1-201ENST00000583030 GOLGA3Q08378 1498 aa21.27■■□□□ 1
AC005562.1-201ENST00000583030 RAPGEF2Q9Y4G8 1499 aa21.25■□□□□ 0.99
AC005562.1-201ENST00000583030 CLIP1P30622 1438 aa21.2■□□□□ 0.98
AC005562.1-201ENST00000583030 EEA1Q15075 1411 aa21.16■□□□□ 0.98
AC005562.1-201ENST00000583030 ATP1B4Q9UN42 357 aaPredicted RBP21.15■□□□□ 0.98
AC005562.1-201ENST00000583030 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
AC005562.1-201ENST00000583030 ITGAEP38570 1179 aa21.13■□□□□ 0.97
AC005562.1-201ENST00000583030 P3H3Q8IVL6 736 aa21.12■□□□□ 0.97
AC005562.1-201ENST00000583030 DNAJC5BQ9UF47 199 aa21.12■□□□□ 0.97
AC005562.1-201ENST00000583030 NCAPD3P42695 1498 aa21.09■□□□□ 0.97
AC005562.1-201ENST00000583030 ZNF316A6NFI3 1004 aaPredicted RBP21.05■□□□□ 0.96
AC005562.1-201ENST00000583030 MIER1Q8N108 512 aa21.05■□□□□ 0.96
AC005562.1-201ENST00000583030 CUX1P39880 1505 aa21.03■□□□□ 0.96
AC005562.1-201ENST00000583030 KANK4Q5T7N3 995 aaPredicted RBP20.98■□□□□ 0.95
AC005562.1-201ENST00000583030 TOP2BQ02880 1626 aa20.98■□□□□ 0.95
AC005562.1-201ENST00000583030 HMGXB3Q12766 1538 aa20.93■□□□□ 0.94
AC005562.1-201ENST00000583030 CC2D2AQ9P2K1 1620 aa20.93■□□□□ 0.94
AC005562.1-201ENST00000583030 CUX2O14529 1486 aa20.93■□□□□ 0.94
AC005562.1-201ENST00000583030 NESP48681 1621 aa20.92■□□□□ 0.94
AC005562.1-201ENST00000583030 CFTRP13569 1480 aa20.91■□□□□ 0.94
AC005562.1-201ENST00000583030 KIF27Q86VH2 1401 aa20.91■□□□□ 0.94
AC005562.1-201ENST00000583030 BCL11AQ9H165 835 aa20.91■□□□□ 0.94
AC005562.1-201ENST00000583030 VPS8Q8N3P4 1428 aa20.9■□□□□ 0.94
AC005562.1-201ENST00000583030 CADPSQ9ULU8 1353 aa20.89■□□□□ 0.93
AC005562.1-201ENST00000583030 KIF21BO75037 1637 aa20.89■□□□□ 0.93
AC005562.1-201ENST00000583030 RAD54L2Q9Y4B4 1467 aa20.8■□□□□ 0.92
AC005562.1-201ENST00000583030 BIVM-ERCC5R4GMW8 1640 aa20.79■□□□□ 0.92
AC005562.1-201ENST00000583030 FGD5Q6ZNL6 1462 aa20.78■□□□□ 0.92
AC005562.1-201ENST00000583030 ARAP1Q96P48 1450 aa20.78■□□□□ 0.92
AC005562.1-201ENST00000583030 PRXQ9BXM0 1461 aa20.77■□□□□ 0.92
AC005562.1-201ENST00000583030 ANP32EQ9BTT0 268 aa20.76■□□□□ 0.91
AC005562.1-201ENST00000583030 ARID3CA6NKF2 412 aa20.75■□□□□ 0.91
AC005562.1-201ENST00000583030 FANCD2Q9BXW9 1451 aa20.74■□□□□ 0.91
AC005562.1-201ENST00000583030 IGF1RP08069 1367 aa20.74■□□□□ 0.91
AC005562.1-201ENST00000583030 BCANQ96GW7 911 aa20.73■□□□□ 0.91
AC005562.1-201ENST00000583030 CARMIL1Q5VZK9 1371 aa20.73■□□□□ 0.91
AC005562.1-201ENST00000583030 SUPT16HQ9Y5B9 1047 aaKnown RBP20.7■□□□□ 0.9
AC005562.1-201ENST00000583030 FAM50AQ14320 339 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms