RNA–Protein interactions for RNA: ENST00000580360.1

AC005899.3-201, humanhuman

TSL 3 BASIC

Gene AC005899.3, Length 271 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005899.3-201ENST00000580360 AEBP2Q6ZN18 517 aaPredicted RBP26.64■■□□□ 1.86
AC005899.3-201ENST00000580360 CHIC1Q5VXU3 224 aa25.63■■□□□ 1.69
AC005899.3-201ENST00000580360 PHF23Q9BUL5 403 aaPredicted RBP22.6■■□□□ 1.21
AC005899.3-201ENST00000580360 SENP3Q9H4L4 574 aaPredicted RBP22.49■■□□□ 1.19
AC005899.3-201ENST00000580360 FOXD1Q16676 465 aa21■□□□□ 0.95
AC005899.3-201ENST00000580360 PLPPR3Q6T4P5 718 aa20.63■□□□□ 0.89
AC005899.3-201ENST00000580360 PPP6R1Q9UPN7 881 aa20.05■□□□□ 0.8
AC005899.3-201ENST00000580360 ADRA2BP18089 450 aa19.98■□□□□ 0.79
AC005899.3-201ENST00000580360 PIAS4Q8N2W9 510 aaPredicted RBP19.7■□□□□ 0.74
AC005899.3-201ENST00000580360 MSH5O43196 834 aa19.36■□□□□ 0.69
AC005899.3-201ENST00000580360 POTEDQ86YR6 584 aa18.86■□□□□ 0.61
AC005899.3-201ENST00000580360 MAPK8IP2Q13387 824 aaPredicted RBP18.24■□□□□ 0.51
AC005899.3-201ENST00000580360 PPP4R3CPQ6ZMV5 832 aa18.19■□□□□ 0.5
AC005899.3-201ENST00000580360 SCAF1Q9H7N4 1312 aaKnown RBP18.08■□□□□ 0.49
AC005899.3-201ENST00000580360 DMRT2Q9Y5R5 561 aa17.95■□□□□ 0.46
AC005899.3-201ENST00000580360 CNKSR2Q8WXI2 1034 aa17.69■□□□□ 0.42
AC005899.3-201ENST00000580360 KCNA4P22459 653 aa17.51■□□□□ 0.39
AC005899.3-201ENST00000580360 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
AC005899.3-201ENST00000580360 HOXD11P31277 338 aaPredicted RBP17.46■□□□□ 0.39
AC005899.3-201ENST00000580360 RNF216Q9NWF9 866 aaPredicted RBP17.43■□□□□ 0.38
AC005899.3-201ENST00000580360 NPM3O75607 178 aaKnown RBP17.41■□□□□ 0.38
AC005899.3-201ENST00000580360 DCAF8L1A6NGE4 600 aa17.17■□□□□ 0.34
AC005899.3-201ENST00000580360 DNAJC5BQ9UF47 199 aa16.86■□□□□ 0.29
AC005899.3-201ENST00000580360 RNF39Q9H2S5 420 aa16.64■□□□□ 0.25
AC005899.3-201ENST00000580360 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.6■□□□□ 0.25
AC005899.3-201ENST00000580360 SLC4A1APQ9BWU0 796 aaKnown RBP16.55■□□□□ 0.24
AC005899.3-201ENST00000580360 SLC4A2P04920 1241 aa16.54■□□□□ 0.24
AC005899.3-201ENST00000580360 U3KPZ7 1027 aaPredicted RBP16.39■□□□□ 0.21
AC005899.3-201ENST00000580360 CACNB1Q02641 598 aaPredicted RBP16.37■□□□□ 0.21
AC005899.3-201ENST00000580360 C1QBPQ07021 282 aaKnown RBP16.35■□□□□ 0.21
AC005899.3-201ENST00000580360 ZBTB22O15209 634 aa16.19■□□□□ 0.18
AC005899.3-201ENST00000580360 FOXD4L1Q9NU39 408 aa16.12■□□□□ 0.17
AC005899.3-201ENST00000580360 SPINK5Q9NQ38 1064 aaPredicted RBP16.04■□□□□ 0.16
AC005899.3-201ENST00000580360 MYCNP04198 464 aaPredicted RBP16.02■□□□□ 0.16
AC005899.3-201ENST00000580360 NISCHQ9Y2I1 1504 aa15.92■□□□□ 0.14
AC005899.3-201ENST00000580360 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.9■□□□□ 0.14
AC005899.3-201ENST00000580360 CAPN15O75808 1086 aa15.9■□□□□ 0.14
AC005899.3-201ENST00000580360 HNRNPUL2Q1KMD3 747 aaKnown RBP15.9■□□□□ 0.14
AC005899.3-201ENST00000580360 SAMD1Q6SPF0 538 aaPredicted RBP15.88■□□□□ 0.13
AC005899.3-201ENST00000580360 EHMT2Q96KQ7 1210 aa15.82■□□□□ 0.12
AC005899.3-201ENST00000580360 TRHP20396 242 aaPredicted RBP15.78■□□□□ 0.12
AC005899.3-201ENST00000580360 CSRNP3Q8WYN3 585 aa15.77■□□□□ 0.12
AC005899.3-201ENST00000580360 APLP2Q06481 763 aa15.76■□□□□ 0.11
AC005899.3-201ENST00000580360 ATF5Q9Y2D1 282 aaPredicted RBP15.76■□□□□ 0.11
AC005899.3-201ENST00000580360 DSG3P32926 999 aa15.74■□□□□ 0.11
AC005899.3-201ENST00000580360 ZNF219Q9P2Y4 722 aaPredicted RBP15.69■□□□□ 0.1
AC005899.3-201ENST00000580360 ABCB7O75027 752 aa15.66■□□□□ 0.1
AC005899.3-201ENST00000580360 ATXN8OSP0DMR3 200 aa15.51■□□□□ 0.07
AC005899.3-201ENST00000580360 POLA2Q14181 598 aa15.47■□□□□ 0.07
AC005899.3-201ENST00000580360 ZBTB12Q9Y330 459 aaPredicted RBP15.06■□□□□ 0
AC005899.3-201ENST00000580360 MKRN4PQ13434 485 aaPredicted RBP15.04■□□□□ -0
AC005899.3-201ENST00000580360 OSCARQ8IYS5 282 aa15□□□□□ -0.01
AC005899.3-201ENST00000580360 FBLN2P98095 1184 aa14.91□□□□□ -0.02
AC005899.3-201ENST00000580360 RBM42Q9BTD8 480 aaKnown RBP14.89□□□□□ -0.03
AC005899.3-201ENST00000580360 SPDYE2BA6NHP3 402 aa14.69□□□□□ -0.06
AC005899.3-201ENST00000580360 SPDYE6P0CI01 402 aa14.69□□□□□ -0.06
AC005899.3-201ENST00000580360 SPDYE2Q495Y8 402 aa14.69□□□□□ -0.06
AC005899.3-201ENST00000580360 AKT1S1Q96B36 256 aa14.68□□□□□ -0.06
AC005899.3-201ENST00000580360 SSUH2Q9Y2M2 353 aa14.62□□□□□ -0.07
AC005899.3-201ENST00000580360 ZNF692Q9BU19 519 aaPredicted RBP14.61□□□□□ -0.07
AC005899.3-201ENST00000580360 REM2Q8IYK8 340 aaPredicted RBP14.6□□□□□ -0.07
AC005899.3-201ENST00000580360 PITPNM1O00562 1244 aa14.48□□□□□ -0.09
AC005899.3-201ENST00000580360 CHRDL2Q6WN34 429 aa14.48□□□□□ -0.09
AC005899.3-201ENST00000580360 SPDYE4A6NLX3 237 aa14.46□□□□□ -0.09
AC005899.3-201ENST00000580360 POTEHQ6S545 545 aa14.45□□□□□ -0.1
AC005899.3-201ENST00000580360 PABPN1Q86U42 306 aaKnown RBP eCLIP14.44□□□□□ -0.1
AC005899.3-201ENST00000580360 SPDYE1Q8NFV5 336 aaPredicted RBP14.31□□□□□ -0.12
AC005899.3-201ENST00000580360 CLEC11AQ9Y240 323 aa14.31□□□□□ -0.12
AC005899.3-201ENST00000580360 PIP4P2Q8N4L2 257 aa14.26□□□□□ -0.13
AC005899.3-201ENST00000580360 FKBP8Q14318 412 aa14.24□□□□□ -0.13
AC005899.3-201ENST00000580360 PROM2Q8N271 834 aa14.23□□□□□ -0.13
AC005899.3-201ENST00000580360 FXR2P51116 673 aaKnown RBP eCLIP14.22□□□□□ -0.13
AC005899.3-201ENST00000580360 PRR29P0C7W0 189 aa14.11□□□□□ -0.15
AC005899.3-201ENST00000580360 CHADLQ6NUI6 762 aa14.08□□□□□ -0.16
AC005899.3-201ENST00000580360 PRKAR2AP13861 404 aaKnown RBP14.07□□□□□ -0.16
AC005899.3-201ENST00000580360 STAG3Q9UJ98 1225 aa14.03□□□□□ -0.16
AC005899.3-201ENST00000580360 CREBZFQ9NS37 354 aa13.95□□□□□ -0.18
AC005899.3-201ENST00000580360 FARP1Q9Y4F1 1045 aaPredicted RBP13.84□□□□□ -0.19
AC005899.3-201ENST00000580360 HAX1O00165 279 aa13.82□□□□□ -0.2
AC005899.3-201ENST00000580360 EVX2Q03828 476 aa13.82□□□□□ -0.2
AC005899.3-201ENST00000580360 MNX1P50219 401 aaPredicted RBP13.81□□□□□ -0.2
AC005899.3-201ENST00000580360 CCDC180Q9P1Z9 1646 aa13.79□□□□□ -0.2
AC005899.3-201ENST00000580360 C19orf67A6NJJ6 358 aa13.75□□□□□ -0.21
AC005899.3-201ENST00000580360 MIER1Q8N108 512 aa13.72□□□□□ -0.21
AC005899.3-201ENST00000580360 FBXO3Q9UK99 471 aa13.69□□□□□ -0.22
AC005899.3-201ENST00000580360 PLCD3Q8N3E9 789 aa13.66□□□□□ -0.22
AC005899.3-201ENST00000580360 SP7Q8TDD2 431 aaPredicted RBP13.66□□□□□ -0.22
AC005899.3-201ENST00000580360 CD44P16070 742 aaKnown RBP13.64□□□□□ -0.23
AC005899.3-201ENST00000580360 VASPP50552 380 aaPredicted RBP13.61□□□□□ -0.23
AC005899.3-201ENST00000580360 NPM1P06748 294 aaKnown RBP eCLIP13.57□□□□□ -0.24
AC005899.3-201ENST00000580360 PLEKHG5O94827 1062 aa13.55□□□□□ -0.24
AC005899.3-201ENST00000580360 ZRANB1Q9UGI0 708 aa13.52□□□□□ -0.25
AC005899.3-201ENST00000580360 RASEFQ8IZ41 740 aa13.5□□□□□ -0.25
AC005899.3-201ENST00000580360 NUBP1P53384 320 aa13.46□□□□□ -0.25
AC005899.3-201ENST00000580360 IFNLR1Q8IU57 520 aaPredicted RBP13.46□□□□□ -0.25
AC005899.3-201ENST00000580360 GABBR2O75899 941 aa13.45□□□□□ -0.26
AC005899.3-201ENST00000580360 TSPYL2Q9H2G4 693 aaPredicted RBP13.45□□□□□ -0.26
AC005899.3-201ENST00000580360 ZNF579Q8NAF0 562 aaKnown RBP13.44□□□□□ -0.26
AC005899.3-201ENST00000580360 ZBTB47Q9UFB7 747 aaPredicted RBP13.44□□□□□ -0.26
AC005899.3-201ENST00000580360 PHF12Q96QT6 1004 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms