RNA–Protein interactions for RNA: ENST00000580081.1

CLTC-212, Transcript of clathrin heavy chain, humanhuman

TSL 4

Gene CLTC, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-212ENST00000580081 AEBP2Q6ZN18 517 aaPredicted RBP23.37■■□□□ 1.33
CLTC-212ENST00000580081 CHIC1Q5VXU3 224 aa22.13■■□□□ 1.13
CLTC-212ENST00000580081 NISCHQ9Y2I1 1504 aa20.32■□□□□ 0.84
CLTC-212ENST00000580081 SENP3Q9H4L4 574 aaPredicted RBP19.86■□□□□ 0.77
CLTC-212ENST00000580081 PHF23Q9BUL5 403 aaPredicted RBP19.61■□□□□ 0.73
CLTC-212ENST00000580081 FOXD1Q16676 465 aa18.56■□□□□ 0.56
CLTC-212ENST00000580081 CCDC180Q9P1Z9 1646 aa17.88■□□□□ 0.45
CLTC-212ENST00000580081 PLPPR3Q6T4P5 718 aa17.63■□□□□ 0.41
CLTC-212ENST00000580081 PPP6R1Q9UPN7 881 aa17.35■□□□□ 0.37
CLTC-212ENST00000580081 MSH5O43196 834 aa17.33■□□□□ 0.36
CLTC-212ENST00000580081 PIAS4Q8N2W9 510 aaPredicted RBP17.29■□□□□ 0.36
CLTC-212ENST00000580081 ADRA2BP18089 450 aa17.26■□□□□ 0.35
CLTC-212ENST00000580081 ZCCHC6Q5VYS8 1495 aaKnown RBP17.05■□□□□ 0.32
CLTC-212ENST00000580081 POTEDQ86YR6 584 aa16.99■□□□□ 0.31
CLTC-212ENST00000580081 ABCC9O60706 1549 aa16.94■□□□□ 0.3
CLTC-212ENST00000580081 DCAF1Q9Y4B6 1507 aa16.87■□□□□ 0.29
CLTC-212ENST00000580081 MYO15BQ96JP2 1530 aa16.75■□□□□ 0.27
CLTC-212ENST00000580081 DCAF8L2P0C7V8 631 aa16.7■□□□□ 0.26
CLTC-212ENST00000580081 NACADO15069 1562 aa16.67■□□□□ 0.26
CLTC-212ENST00000580081 RB1CC1Q8TDY2 1594 aa16.56■□□□□ 0.24
CLTC-212ENST00000580081 SCRIBQ14160 1630 aa16.32■□□□□ 0.2
CLTC-212ENST00000580081 SHROOM4Q9ULL8 1493 aa16.32■□□□□ 0.2
CLTC-212ENST00000580081 UNC13AQ9UPW8 1703 aa16.18■□□□□ 0.18
CLTC-212ENST00000580081 BICRAQ9NZM4 1560 aa16.02■□□□□ 0.16
CLTC-212ENST00000580081 PABPN1Q86U42 306 aaKnown RBP eCLIP15.88■□□□□ 0.13
CLTC-212ENST00000580081 MAPK8IP2Q13387 824 aaPredicted RBP15.87■□□□□ 0.13
CLTC-212ENST00000580081 DMRT2Q9Y5R5 561 aa15.77■□□□□ 0.12
CLTC-212ENST00000580081 CECR2Q9BXF3 1484 aa15.74■□□□□ 0.11
CLTC-212ENST00000580081 BAZ1AQ9NRL2 1556 aaPredicted RBP15.73■□□□□ 0.11
CLTC-212ENST00000580081 SCAF1Q9H7N4 1312 aaKnown RBP15.71■□□□□ 0.11
CLTC-212ENST00000580081 SMARCA4P51532 1647 aa15.67■□□□□ 0.1
CLTC-212ENST00000580081 RSF1Q96T23 1441 aaPredicted RBP15.66■□□□□ 0.1
CLTC-212ENST00000580081 MROH2BQ7Z745 1585 aa15.66■□□□□ 0.1
CLTC-212ENST00000580081 SUPT5HO00267 1087 aaKnown RBP15.61■□□□□ 0.09
CLTC-212ENST00000580081 EIF4G1Q04637 1599 aaKnown RBP15.57■□□□□ 0.08
CLTC-212ENST00000580081 PEG3Q9GZU2 1588 aa15.52■□□□□ 0.07
CLTC-212ENST00000580081 WIZO95785 1651 aa15.51■□□□□ 0.07
CLTC-212ENST00000580081 SMARCA2P51531 1590 aa15.47■□□□□ 0.07
CLTC-212ENST00000580081 PPP4R3CPQ6ZMV5 832 aa15.46■□□□□ 0.07
CLTC-212ENST00000580081 ATAD2BQ9ULI0 1458 aa15.44■□□□□ 0.06
CLTC-212ENST00000580081 TOP2AP11388 1531 aaKnown RBP15.41■□□□□ 0.06
CLTC-212ENST00000580081 CC2D2AQ9P2K1 1620 aa15.36■□□□□ 0.05
CLTC-212ENST00000580081 NCAPD3P42695 1498 aa15.35■□□□□ 0.05
CLTC-212ENST00000580081 BAZ1BQ9UIG0 1483 aaKnown RBP15.35■□□□□ 0.05
CLTC-212ENST00000580081 HMGXB3Q12766 1538 aa15.35■□□□□ 0.05
CLTC-212ENST00000580081 HOXD11P31277 338 aaPredicted RBP15.2■□□□□ 0.02
CLTC-212ENST00000580081 CCDC88BA6NC98 1476 aa15.2■□□□□ 0.02
CLTC-212ENST00000580081 CNKSR2Q8WXI2 1034 aa15.17■□□□□ 0.02
CLTC-212ENST00000580081 DNAJC5BQ9UF47 199 aa15.07■□□□□ 0
CLTC-212ENST00000580081 RNF216Q9NWF9 866 aaPredicted RBP15.05■□□□□ -0
CLTC-212ENST00000580081 DCAF8L1A6NGE4 600 aa15.04■□□□□ -0
CLTC-212ENST00000580081 CFTRP13569 1480 aa14.95□□□□□ -0.02
CLTC-212ENST00000580081 CADPSQ9ULU8 1353 aa14.93□□□□□ -0.02
CLTC-212ENST00000580081 PRDM2Q13029 1718 aa14.92□□□□□ -0.02
CLTC-212ENST00000580081 LAMC3Q9Y6N6 1575 aa14.89□□□□□ -0.03
CLTC-212ENST00000580081 CACNB1Q02641 598 aaPredicted RBP14.85□□□□□ -0.03
CLTC-212ENST00000580081 RNF39Q9H2S5 420 aa14.83□□□□□ -0.04
CLTC-212ENST00000580081 NCBP3Q53F19 620 aaKnown RBP14.81□□□□□ -0.04
CLTC-212ENST00000580081 NESP48681 1621 aa14.81□□□□□ -0.04
CLTC-212ENST00000580081 ABCC8Q09428 1581 aa14.79□□□□□ -0.04
CLTC-212ENST00000580081 FANCD2Q9BXW9 1451 aa14.76□□□□□ -0.05
CLTC-212ENST00000580081 WRNQ14191 1432 aaPredicted RBP eCLIP14.76□□□□□ -0.05
CLTC-212ENST00000580081 PDS5BQ9NTI5 1447 aa14.75□□□□□ -0.05
CLTC-212ENST00000580081 TRIM41Q8WV44 630 aa14.74□□□□□ -0.05
CLTC-212ENST00000580081 CEP164Q9UPV0 1460 aa14.71□□□□□ -0.05
CLTC-212ENST00000580081 SYNJ1O43426 1573 aa14.7□□□□□ -0.06
CLTC-212ENST00000580081 BIVM-ERCC5R4GMW8 1640 aa14.7□□□□□ -0.06
CLTC-212ENST00000580081 TOP2BQ02880 1626 aa14.69□□□□□ -0.06
CLTC-212ENST00000580081 KIF21AQ7Z4S6 1674 aa14.68□□□□□ -0.06
CLTC-212ENST00000580081 NPM3O75607 178 aaKnown RBP14.67□□□□□ -0.06
CLTC-212ENST00000580081 CUX1P39880 1505 aa14.66□□□□□ -0.06
CLTC-212ENST00000580081 DNMBPQ6XZF7 1577 aa14.64□□□□□ -0.07
CLTC-212ENST00000580081 TOPBP1Q92547 1522 aa14.59□□□□□ -0.07
CLTC-212ENST00000580081 ERCC6Q03468 1493 aa14.58□□□□□ -0.08
CLTC-212ENST00000580081 MRC2Q9UBG0 1479 aa14.58□□□□□ -0.08
CLTC-212ENST00000580081 URB2Q14146 1524 aaKnown RBP14.58□□□□□ -0.08
CLTC-212ENST00000580081 C1QBPQ07021 282 aaKnown RBP14.57□□□□□ -0.08
CLTC-212ENST00000580081 FGD5Q6ZNL6 1462 aa14.54□□□□□ -0.08
CLTC-212ENST00000580081 WDR62O43379 1518 aa14.52□□□□□ -0.08
CLTC-212ENST00000580081 EEA1Q15075 1411 aa14.51□□□□□ -0.09
CLTC-212ENST00000580081 THOC2Q8NI27 1593 aaKnown RBP14.51□□□□□ -0.09
CLTC-212ENST00000580081 POLA1P09884 1462 aaPredicted RBP14.5□□□□□ -0.09
CLTC-212ENST00000580081 SOGA1O94964 1423 aa14.46□□□□□ -0.09
CLTC-212ENST00000580081 ABCA10Q8WWZ4 1543 aa14.43□□□□□ -0.1
CLTC-212ENST00000580081 KIF27Q86VH2 1401 aa14.42□□□□□ -0.1
CLTC-212ENST00000580081 WDR97A6NE52 1622 aa14.42□□□□□ -0.1
CLTC-212ENST00000580081 RUSC2Q8N2Y8 1516 aa14.41□□□□□ -0.1
CLTC-212ENST00000580081 CUX2O14529 1486 aa14.4□□□□□ -0.1
CLTC-212ENST00000580081 RAD54L2Q9Y4B4 1467 aa14.4□□□□□ -0.1
CLTC-212ENST00000580081 FAM9AQ8IZU1 332 aaPredicted RBP14.4□□□□□ -0.1
CLTC-212ENST00000580081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.4□□□□□ -0.19e-10■□□□□ 10.7
CLTC-212ENST00000580081 TARBP1Q13395 1621 aaKnown RBP14.4□□□□□ -0.1
CLTC-212ENST00000580081 KCNA4P22459 653 aa14.38□□□□□ -0.11
CLTC-212ENST00000580081 IFT140Q96RY7 1462 aa14.38□□□□□ -0.11
CLTC-212ENST00000580081 CSRNP3Q8WYN3 585 aa14.36□□□□□ -0.11
CLTC-212ENST00000580081 ABCA5Q8WWZ7 1642 aa14.33□□□□□ -0.11
CLTC-212ENST00000580081 KIF21BO75037 1637 aa14.32□□□□□ -0.12
CLTC-212ENST00000580081 GAPVD1Q14C86 1478 aa14.29□□□□□ -0.12
CLTC-212ENST00000580081 ERICH3Q5RHP9 1530 aa14.28□□□□□ -0.12
CLTC-212ENST00000580081 GOLGA3Q08378 1498 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms