RNA–Protein interactions for RNA: ENST00000580081.1

CLTC-212, Transcript of clathrin heavy chain, humanhuman

TSL 4

Gene CLTC, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-212ENST00000580081 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.76□□□□□ -1.013e-8■■■■■ 70.6
CLTC-212ENST00000580081 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.41□□□□□ -0.91e-11■■■■■ 62.1
CLTC-212ENST00000580081 AQRO60306 1485 aaKnown RBP eCLIP14.21□□□□□ -0.137e-10■■■■■ 39.6
CLTC-212ENST00000580081 NIPBLQ6KC79 2804 aaeCLIP6.67□□□□□ -1.341e-8■■■■■ 33.4
CLTC-212ENST00000580081 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.82□□□□□ -14e-13■■■■■ 26.9
CLTC-212ENST00000580081 FXR2P51116 673 aaKnown RBP eCLIP12.56□□□□□ -0.42e-11■■■■□ 26.3
CLTC-212ENST00000580081 G3BP1Q13283 466 aaKnown RBP eCLIP10.83□□□□□ -0.683e-27■■■■□ 26
CLTC-212ENST00000580081 PTBP1P26599 531 aaKnown RBP eCLIP7.5□□□□□ -1.214e-7■■■■□ 24.3
CLTC-212ENST00000580081 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.61□□□□□ -0.872e-6■■■■□ 23.7
CLTC-212ENST00000580081 TIA1P31483 386 aaKnown RBP eCLIP8.38□□□□□ -1.075e-7■■■■□ 23.6
CLTC-212ENST00000580081 PRPF4O43172 522 aaKnown RBP eCLIP8.73□□□□□ -1.016e-11■■■■□ 23.4
CLTC-212ENST00000580081 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.07□□□□□ -1.281e-7■■■■□ 22.6
CLTC-212ENST00000580081 PCBP2Q15366 365 aaKnown RBP eCLIP8.56□□□□□ -1.046e-7■■■■□ 21.4
CLTC-212ENST00000580081 FXR1P51114 621 aaKnown RBP eCLIP9.5□□□□□ -0.891e-7■■■□□ 19.2
CLTC-212ENST00000580081 DDX3XO00571 662 aaKnown RBP eCLIP9.36□□□□□ -0.916e-21■■■□□ 18.9
CLTC-212ENST00000580081 YBX3P16989 372 aaKnown RBP eCLIP10.36□□□□□ -0.759e-22■■■□□ 18.7
CLTC-212ENST00000580081 PCBP1Q15365 356 aaKnown RBP eCLIP9.58□□□□□ -0.885e-41■■■□□ 18.6
CLTC-212ENST00000580081 GTF2F1P35269 517 aaKnown RBP eCLIP9.11□□□□□ -0.951e-9■■■□□ 18.6
CLTC-212ENST00000580081 KHSRPQ92945 711 aaKnown RBP eCLIP10.1□□□□□ -0.793e-7■■■□□ 16.1
CLTC-212ENST00000580081 RBM15Q96T37 977 aaKnown RBP eCLIP8.92□□□□□ -0.983e-7■■■□□ 15.9
CLTC-212ENST00000580081 FMR1Q06787 632 aaKnown RBP eCLIP10.02□□□□□ -0.812e-30■■■□□ 15.7
CLTC-212ENST00000580081 EFTUD2Q15029 972 aaKnown RBP eCLIP8.8□□□□□ -13e-9■■■□□ 15.2
CLTC-212ENST00000580081 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.11□□□□□ -0.954e-8■■□□□ 14.4
CLTC-212ENST00000580081 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.93□□□□□ -1.147e-10■■□□□ 13
CLTC-212ENST00000580081 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.48□□□□□ -0.898e-7■■□□□ 11.8
CLTC-212ENST00000580081 ZC3H11AO75152 810 aaKnown RBP eCLIP9.48□□□□□ -0.899e-8■□□□□ 11.3
CLTC-212ENST00000580081 SF3B4Q15427 424 aaKnown RBP eCLIP7.79□□□□□ -1.166e-6■□□□□ 11
CLTC-212ENST00000580081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.4□□□□□ -0.19e-10■□□□□ 10.7
CLTC-212ENST00000580081 QKIQ96PU8 341 aaKnown RBP eCLIP9.03□□□□□ -0.962e-6■□□□□ 10.3
CLTC-212ENST00000580081 HNRNPKP61978 463 aaKnown RBP eCLIP8.5□□□□□ -1.053e-7■□□□□ 9.9
CLTC-212ENST00000580081 RPS3P23396 243 aaKnown RBP eCLIP8.7□□□□□ -1.021e-8■□□□□ 9.8
CLTC-212ENST00000580081 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.35□□□□□ -0.279e-6■□□□□ 9.6
CLTC-212ENST00000580081 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.95□□□□□ -1.142e-7■□□□□ 9.6
CLTC-212ENST00000580081 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.19□□□□□ -0.943e-6■□□□□ 9.1
Retrieved 34 of 34 RNA–protein pairs in 8.9 ms