RNA–Protein interactions for RNA: ENST00000580027.1

LLGL2-215, Transcript of LLGL2, scribble cell polarity complex component, humanhuman

TSL 2

Gene LLGL2, Length 1,875 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LLGL2-215ENST00000580027 NISCHQ9Y2I1 1504 aa35.61■■■■□ 3.29
LLGL2-215ENST00000580027 CCDC180Q9P1Z9 1646 aa30.91■■■□□ 2.54
LLGL2-215ENST00000580027 ZCCHC6Q5VYS8 1495 aaKnown RBP30.03■■■□□ 2.4
LLGL2-215ENST00000580027 ABCC9O60706 1549 aa30.01■■■□□ 2.4
LLGL2-215ENST00000580027 SHROOM4Q9ULL8 1493 aa29.6■■■□□ 2.33
LLGL2-215ENST00000580027 DCAF1Q9Y4B6 1507 aa29.4■■■□□ 2.3
LLGL2-215ENST00000580027 DCAF8L2P0C7V8 631 aa29.29■■■□□ 2.28
LLGL2-215ENST00000580027 NACADO15069 1562 aa28.99■■■□□ 2.23
LLGL2-215ENST00000580027 RB1CC1Q8TDY2 1594 aa28.93■■■□□ 2.22
LLGL2-215ENST00000580027 MYO15BQ96JP2 1530 aa28.91■■■□□ 2.22
LLGL2-215ENST00000580027 SUPT5HO00267 1087 aaKnown RBP28.79■■■□□ 2.2
LLGL2-215ENST00000580027 SCRIBQ14160 1630 aa28.39■■■□□ 2.14
LLGL2-215ENST00000580027 UNC13AQ9UPW8 1703 aa28.38■■■□□ 2.13
LLGL2-215ENST00000580027 PABPN1Q86U42 306 aaKnown RBP eCLIP28.17■■■□□ 2.1
LLGL2-215ENST00000580027 BICRAQ9NZM4 1560 aa28.13■■■□□ 2.09
LLGL2-215ENST00000580027 RSF1Q96T23 1441 aaPredicted RBP27.9■■■□□ 2.06
LLGL2-215ENST00000580027 CHIC1Q5VXU3 224 aa27.89■■■□□ 2.05
LLGL2-215ENST00000580027 CECR2Q9BXF3 1484 aa27.66■■■□□ 2.02
LLGL2-215ENST00000580027 MROH2BQ7Z745 1585 aa27.56■■■□□ 2
LLGL2-215ENST00000580027 BAZ1AQ9NRL2 1556 aaPredicted RBP27.42■■□□□ 1.98
LLGL2-215ENST00000580027 WIZO95785 1651 aa27.37■■□□□ 1.97
LLGL2-215ENST00000580027 EIF4G1Q04637 1599 aaKnown RBP27.33■■□□□ 1.97
LLGL2-215ENST00000580027 DNAJC5BQ9UF47 199 aa27.28■■□□□ 1.96
LLGL2-215ENST00000580027 SMARCA4P51532 1647 aa27.22■■□□□ 1.95
LLGL2-215ENST00000580027 CC2D2AQ9P2K1 1620 aa27.14■■□□□ 1.93
LLGL2-215ENST00000580027 TOP2AP11388 1531 aaKnown RBP27.07■■□□□ 1.92
LLGL2-215ENST00000580027 TRIM41Q8WV44 630 aa27■■□□□ 1.91
LLGL2-215ENST00000580027 LOC105371045A0A1W2PR82 267 aa26.88■■□□□ 1.89
LLGL2-215ENST00000580027 ATAD2BQ9ULI0 1458 aa26.88■■□□□ 1.89
LLGL2-215ENST00000580027 SMARCA2P51531 1590 aa26.85■■□□□ 1.89
LLGL2-215ENST00000580027 CCDC88BA6NC98 1476 aa26.84■■□□□ 1.89
LLGL2-215ENST00000580027 PEG3Q9GZU2 1588 aa26.84■■□□□ 1.89
LLGL2-215ENST00000580027 NCAPD3P42695 1498 aa26.78■■□□□ 1.88
LLGL2-215ENST00000580027 BAZ1BQ9UIG0 1483 aaKnown RBP26.66■■□□□ 1.86
LLGL2-215ENST00000580027 HMGXB3Q12766 1538 aa26.65■■□□□ 1.86
LLGL2-215ENST00000580027 FAM9AQ8IZU1 332 aaPredicted RBP26.57■■□□□ 1.84
LLGL2-215ENST00000580027 ABCC8Q09428 1581 aa26.49■■□□□ 1.83
LLGL2-215ENST00000580027 PCGF6Q9BYE7 350 aa26.33■■□□□ 1.81
LLGL2-215ENST00000580027 WRNQ14191 1432 aaPredicted RBP eCLIP26.23■■□□□ 1.79
LLGL2-215ENST00000580027 EHMT2Q96KQ7 1210 aa26.2■■□□□ 1.78
LLGL2-215ENST00000580027 EEA1Q15075 1411 aa26.17■■□□□ 1.78
LLGL2-215ENST00000580027 SOGA1O94964 1423 aa26.15■■□□□ 1.78
LLGL2-215ENST00000580027 TRIM26Q12899 539 aaPredicted RBP26.13■■□□□ 1.77
LLGL2-215ENST00000580027 NESP48681 1621 aa26.12■■□□□ 1.77
LLGL2-215ENST00000580027 SYNJ1O43426 1573 aa26.1■■□□□ 1.77
LLGL2-215ENST00000580027 HRCP23327 699 aa26.08■■□□□ 1.77
LLGL2-215ENST00000580027 CADPSQ9ULU8 1353 aa26.04■■□□□ 1.76
LLGL2-215ENST00000580027 CSRNP3Q8WYN3 585 aa26.02■■□□□ 1.76
LLGL2-215ENST00000580027 RUSC2Q8N2Y8 1516 aa26.02■■□□□ 1.76
LLGL2-215ENST00000580027 LAMC3Q9Y6N6 1575 aa25.98■■□□□ 1.75
LLGL2-215ENST00000580027 CFTRP13569 1480 aa25.96■■□□□ 1.75
LLGL2-215ENST00000580027 TOP2BQ02880 1626 aa25.92■■□□□ 1.74
LLGL2-215ENST00000580027 TNIKQ9UKE5 1360 aa25.92■■□□□ 1.74
LLGL2-215ENST00000580027 BIVM-ERCC5R4GMW8 1640 aa25.87■■□□□ 1.73
LLGL2-215ENST00000580027 GOLGA3Q08378 1498 aa25.86■■□□□ 1.73
LLGL2-215ENST00000580027 CEP162Q5TB80 1403 aa25.83■■□□□ 1.73
LLGL2-215ENST00000580027 PDS5BQ9NTI5 1447 aa25.8■■□□□ 1.72
LLGL2-215ENST00000580027 KIF21BO75037 1637 aa25.8■■□□□ 1.72
LLGL2-215ENST00000580027 CEP164Q9UPV0 1460 aa25.79■■□□□ 1.72
LLGL2-215ENST00000580027 ERCC6Q03468 1493 aa25.78■■□□□ 1.72
LLGL2-215ENST00000580027 KIF21AQ7Z4S6 1674 aa25.77■■□□□ 1.72
LLGL2-215ENST00000580027 UBTFP17480 764 aaKnown RBP25.76■■□□□ 1.71
LLGL2-215ENST00000580027 PRDM2Q13029 1718 aa25.75■■□□□ 1.71
LLGL2-215ENST00000580027 FANCD2Q9BXW9 1451 aa25.75■■□□□ 1.71
LLGL2-215ENST00000580027 CUX1P39880 1505 aa25.72■■□□□ 1.71
LLGL2-215ENST00000580027 PPARGC1BQ86YN6 1023 aaKnown RBP25.58■■□□□ 1.69
LLGL2-215ENST00000580027 RAPGEF2Q9Y4G8 1499 aa25.57■■□□□ 1.68
LLGL2-215ENST00000580027 THOC2Q8NI27 1593 aaKnown RBP25.56■■□□□ 1.68
LLGL2-215ENST00000580027 MRC2Q9UBG0 1479 aa25.52■■□□□ 1.68
LLGL2-215ENST00000580027 KIF27Q86VH2 1401 aa25.51■■□□□ 1.67
LLGL2-215ENST00000580027 PRXQ9BXM0 1461 aa25.5■■□□□ 1.67
LLGL2-215ENST00000580027 ERICH3Q5RHP9 1530 aa25.5■■□□□ 1.67
LLGL2-215ENST00000580027 URB2Q14146 1524 aaKnown RBP25.49■■□□□ 1.67
LLGL2-215ENST00000580027 CLIP1P30622 1438 aa25.48■■□□□ 1.67
LLGL2-215ENST00000580027 WDR62O43379 1518 aa25.43■■□□□ 1.66
LLGL2-215ENST00000580027 ZEB1P37275 1124 aaPredicted RBP25.41■■□□□ 1.66
LLGL2-215ENST00000580027 TOPBP1Q92547 1522 aa25.38■■□□□ 1.65
LLGL2-215ENST00000580027 DNMBPQ6XZF7 1577 aa25.35■■□□□ 1.65
LLGL2-215ENST00000580027 VPS8Q8N3P4 1428 aa25.35■■□□□ 1.65
LLGL2-215ENST00000580027 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
LLGL2-215ENST00000580027 CUX2O14529 1486 aa25.31■■□□□ 1.64
LLGL2-215ENST00000580027 TTBK1Q5TCY1 1321 aaPredicted RBP25.24■■□□□ 1.63
LLGL2-215ENST00000580027 IGF1RP08069 1367 aa25.23■■□□□ 1.63
LLGL2-215ENST00000580027 POLA1P09884 1462 aaPredicted RBP25.2■■□□□ 1.63
LLGL2-215ENST00000580027 RANGAP1P46060 587 aaPredicted RBP25.19■■□□□ 1.62
LLGL2-215ENST00000580027 ARAP1Q96P48 1450 aa25.15■■□□□ 1.62
LLGL2-215ENST00000580027 APLP2Q06481 763 aa25.13■■□□□ 1.61
LLGL2-215ENST00000580027 RAD54L2Q9Y4B4 1467 aa25.13■■□□□ 1.61
LLGL2-215ENST00000580027 CARMIL1Q5VZK9 1371 aa25.11■■□□□ 1.61
LLGL2-215ENST00000580027 ABCA10Q8WWZ4 1543 aa25.11■■□□□ 1.61
LLGL2-215ENST00000580027 TARBP1Q13395 1621 aaKnown RBP25.08■■□□□ 1.61
LLGL2-215ENST00000580027 IFT140Q96RY7 1462 aa25.08■■□□□ 1.6
LLGL2-215ENST00000580027 ZNF608Q9ULD9 1512 aaPredicted RBP25.04■■□□□ 1.6
LLGL2-215ENST00000580027 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.04■■□□□ 1.6
LLGL2-215ENST00000580027 ARHGAP35Q9NRY4 1499 aa25.03■■□□□ 1.6
LLGL2-215ENST00000580027 CCER1Q8TC90 406 aaPredicted RBP25.01■■□□□ 1.59
LLGL2-215ENST00000580027 TDRD9Q8NDG6 1382 aaKnown RBP24.96■■□□□ 1.59
LLGL2-215ENST00000580027 WDR97A6NE52 1622 aa24.95■■□□□ 1.58
LLGL2-215ENST00000580027 AQRO60306 1485 aaKnown RBP eCLIP24.94■■□□□ 1.583e-6■■□□□ 12.1
LLGL2-215ENST00000580027 CUL7Q14999 1698 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms