RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 AEBP2Q6ZN18 517 aaPredicted RBP22.73■■□□□ 1.23
DDX42-210ENST00000579539 CHIC1Q5VXU3 224 aa21.85■■□□□ 1.09
DDX42-210ENST00000579539 SENP3Q9H4L4 574 aaPredicted RBP19.28■□□□□ 0.68
DDX42-210ENST00000579539 PHF23Q9BUL5 403 aaPredicted RBP19.22■□□□□ 0.67
DDX42-210ENST00000579539 FOXD1Q16676 465 aa17.98■□□□□ 0.47
DDX42-210ENST00000579539 PLPPR3Q6T4P5 718 aa17.58■□□□□ 0.4
DDX42-210ENST00000579539 PPP6R1Q9UPN7 881 aa17.08■□□□□ 0.32
DDX42-210ENST00000579539 ADRA2BP18089 450 aa17.02■□□□□ 0.32
DDX42-210ENST00000579539 PIAS4Q8N2W9 510 aaPredicted RBP16.83■□□□□ 0.28
DDX42-210ENST00000579539 MSH5O43196 834 aa16.66■□□□□ 0.26
DDX42-210ENST00000579539 POTEDQ86YR6 584 aa15.78■□□□□ 0.12
DDX42-210ENST00000579539 MAPK8IP2Q13387 824 aaPredicted RBP15.56■□□□□ 0.08
DDX42-210ENST00000579539 SCAF1Q9H7N4 1312 aaKnown RBP15.51■□□□□ 0.07
DDX42-210ENST00000579539 PPP4R3CPQ6ZMV5 832 aa15.47■□□□□ 0.07
DDX42-210ENST00000579539 DMRT2Q9Y5R5 561 aa15.36■□□□□ 0.05
DDX42-210ENST00000579539 CNKSR2Q8WXI2 1034 aa15.09■□□□□ 0.01
DDX42-210ENST00000579539 HOXD11P31277 338 aaPredicted RBP14.92□□□□□ -0.02
DDX42-210ENST00000579539 NCBP3Q53F19 620 aaKnown RBP14.92□□□□□ -0.02
DDX42-210ENST00000579539 RNF216Q9NWF9 866 aaPredicted RBP14.88□□□□□ -0.03
DDX42-210ENST00000579539 NPM3O75607 178 aaKnown RBP14.76□□□□□ -0.05
DDX42-210ENST00000579539 KCNA4P22459 653 aa14.75□□□□□ -0.05
DDX42-210ENST00000579539 DCAF8L1A6NGE4 600 aa14.67□□□□□ -0.06
DDX42-210ENST00000579539 DNAJC5BQ9UF47 199 aa14.39□□□□□ -0.11
DDX42-210ENST00000579539 RNF39Q9H2S5 420 aa14.28□□□□□ -0.12
DDX42-210ENST00000579539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.18□□□□□ -0.14
DDX42-210ENST00000579539 CACNB1Q02641 598 aaPredicted RBP14.11□□□□□ -0.15
DDX42-210ENST00000579539 C1QBPQ07021 282 aaKnown RBP14.07□□□□□ -0.16
DDX42-210ENST00000579539 SLC4A2P04920 1241 aa14.03□□□□□ -0.16
DDX42-210ENST00000579539 SLC4A1APQ9BWU0 796 aaKnown RBP13.96□□□□□ -0.17
DDX42-210ENST00000579539 U3KPZ7 1027 aaPredicted RBP13.95□□□□□ -0.18
DDX42-210ENST00000579539 SPINK5Q9NQ38 1064 aaPredicted RBP13.67□□□□□ -0.22
DDX42-210ENST00000579539 FOXD4L1Q9NU39 408 aa13.63□□□□□ -0.23
DDX42-210ENST00000579539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.61□□□□□ -0.23
DDX42-210ENST00000579539 MYCNP04198 464 aaPredicted RBP13.61□□□□□ -0.23
DDX42-210ENST00000579539 HNRNPUL2Q1KMD3 747 aaKnown RBP13.61□□□□□ -0.23
DDX42-210ENST00000579539 ZBTB22O15209 634 aa13.59□□□□□ -0.23
DDX42-210ENST00000579539 CAPN15O75808 1086 aa13.59□□□□□ -0.23
DDX42-210ENST00000579539 SAMD1Q6SPF0 538 aaPredicted RBP13.56□□□□□ -0.24
DDX42-210ENST00000579539 EHMT2Q96KQ7 1210 aa13.56□□□□□ -0.24
DDX42-210ENST00000579539 APLP2Q06481 763 aa13.52□□□□□ -0.25
DDX42-210ENST00000579539 DSG3P32926 999 aa13.47□□□□□ -0.25
DDX42-210ENST00000579539 TRHP20396 242 aaPredicted RBP13.46□□□□□ -0.25
DDX42-210ENST00000579539 ZNF219Q9P2Y4 722 aaPredicted RBP13.42□□□□□ -0.26
DDX42-210ENST00000579539 ATF5Q9Y2D1 282 aaPredicted RBP13.33□□□□□ -0.28
DDX42-210ENST00000579539 ABCB7O75027 752 aa13.31□□□□□ -0.28
DDX42-210ENST00000579539 CSRNP3Q8WYN3 585 aa13.24□□□□□ -0.29
DDX42-210ENST00000579539 ATXN8OSP0DMR3 200 aa13.2□□□□□ -0.3
DDX42-210ENST00000579539 POLA2Q14181 598 aa13.18□□□□□ -0.3
DDX42-210ENST00000579539 ZBTB12Q9Y330 459 aaPredicted RBP12.89□□□□□ -0.35
DDX42-210ENST00000579539 RBM42Q9BTD8 480 aaKnown RBP12.8□□□□□ -0.36
DDX42-210ENST00000579539 MKRN4PQ13434 485 aaPredicted RBP12.73□□□□□ -0.37
DDX42-210ENST00000579539 OSCARQ8IYS5 282 aa12.73□□□□□ -0.37
DDX42-210ENST00000579539 FBLN2P98095 1184 aa12.71□□□□□ -0.37
DDX42-210ENST00000579539 AKT1S1Q96B36 256 aa12.6□□□□□ -0.39
DDX42-210ENST00000579539 SPDYE2BA6NHP3 402 aa12.54□□□□□ -0.4
DDX42-210ENST00000579539 SPDYE6P0CI01 402 aa12.54□□□□□ -0.4
DDX42-210ENST00000579539 SPDYE2Q495Y8 402 aa12.54□□□□□ -0.4
DDX42-210ENST00000579539 REM2Q8IYK8 340 aaPredicted RBP12.5□□□□□ -0.41
DDX42-210ENST00000579539 ZNF692Q9BU19 519 aaPredicted RBP12.45□□□□□ -0.42
DDX42-210ENST00000579539 CHRDL2Q6WN34 429 aa12.43□□□□□ -0.42
DDX42-210ENST00000579539 SSUH2Q9Y2M2 353 aa12.43□□□□□ -0.42
DDX42-210ENST00000579539 POTEHQ6S545 545 aa12.41□□□□□ -0.42
DDX42-210ENST00000579539 PITPNM1O00562 1244 aa12.35□□□□□ -0.43
DDX42-210ENST00000579539 SLC24A1O60721 1099 aa12.3□□□□□ -0.44
DDX42-210ENST00000579539 PABPN1Q86U42 306 aaKnown RBP eCLIP12.28□□□□□ -0.443e-26■■■■■ 27
DDX42-210ENST00000579539 SPDYE4A6NLX3 237 aa12.24□□□□□ -0.45
DDX42-210ENST00000579539 SPDYE1Q8NFV5 336 aaPredicted RBP12.24□□□□□ -0.45
DDX42-210ENST00000579539 PIP4P2Q8N4L2 257 aa12.21□□□□□ -0.45
DDX42-210ENST00000579539 CLEC11AQ9Y240 323 aa12.21□□□□□ -0.45
DDX42-210ENST00000579539 FXR2P51116 673 aaKnown RBP eCLIP12.19□□□□□ -0.46
DDX42-210ENST00000579539 RTN4Q9NQC3 1192 aaKnown RBP12.18□□□□□ -0.46
DDX42-210ENST00000579539 AMER1Q5JTC6 1135 aaPredicted RBP12.08□□□□□ -0.48
DDX42-210ENST00000579539 PRR29P0C7W0 189 aa12.06□□□□□ -0.48
DDX42-210ENST00000579539 PROM2Q8N271 834 aa12.03□□□□□ -0.48
DDX42-210ENST00000579539 PRKAR2AP13861 404 aaKnown RBP12.02□□□□□ -0.49
DDX42-210ENST00000579539 STAG3Q9UJ98 1225 aa11.99□□□□□ -0.49
DDX42-210ENST00000579539 CHADLQ6NUI6 762 aa11.97□□□□□ -0.49
DDX42-210ENST00000579539 FKBP8Q14318 412 aa11.94□□□□□ -0.5
DDX42-210ENST00000579539 HAX1O00165 279 aa11.89□□□□□ -0.51
DDX42-210ENST00000579539 CREBZFQ9NS37 354 aa11.86□□□□□ -0.51
DDX42-210ENST00000579539 EVX2Q03828 476 aa11.83□□□□□ -0.52
DDX42-210ENST00000579539 FARP1Q9Y4F1 1045 aaPredicted RBP11.82□□□□□ -0.52
DDX42-210ENST00000579539 C19orf67A6NJJ6 358 aa11.79□□□□□ -0.52
DDX42-210ENST00000579539 SP7Q8TDD2 431 aaPredicted RBP11.77□□□□□ -0.53
DDX42-210ENST00000579539 MNX1P50219 401 aaPredicted RBP11.72□□□□□ -0.53
DDX42-210ENST00000579539 CD44P16070 742 aaKnown RBP11.65□□□□□ -0.54
DDX42-210ENST00000579539 MIER1Q8N108 512 aa11.65□□□□□ -0.54
DDX42-210ENST00000579539 NPM1P06748 294 aaKnown RBP eCLIP11.6□□□□□ -0.55
DDX42-210ENST00000579539 FBXO3Q9UK99 471 aa11.59□□□□□ -0.55
DDX42-210ENST00000579539 PLCD3Q8N3E9 789 aa11.57□□□□□ -0.56
DDX42-210ENST00000579539 PLEKHG5O94827 1062 aa11.55□□□□□ -0.56
DDX42-210ENST00000579539 GABBR2O75899 941 aa11.54□□□□□ -0.56
DDX42-210ENST00000579539 ZRANB1Q9UGI0 708 aa11.54□□□□□ -0.56
DDX42-210ENST00000579539 ZNF579Q8NAF0 562 aaKnown RBP11.5□□□□□ -0.57
DDX42-210ENST00000579539 PAK3O75914 559 aaPredicted RBP11.47□□□□□ -0.57
DDX42-210ENST00000579539 VASPP50552 380 aaPredicted RBP11.46□□□□□ -0.57
DDX42-210ENST00000579539 ZBTB47Q9UFB7 747 aaPredicted RBP11.44□□□□□ -0.58
DDX42-210ENST00000579539 CLCN6P51797 869 aa11.43□□□□□ -0.58
DDX42-210ENST00000579539 RASEFQ8IZ41 740 aa11.43□□□□□ -0.58
DDX42-210ENST00000579539 TSPYL2Q9H2G4 693 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms