RNA–Protein interactions for RNA: ENST00000574722.5

RPH3AL-214, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 4

Gene RPH3AL, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-214ENST00000574722 SF3B1O75533 1304 aaKnown RBP eCLIP16.87■□□□□ 0.293e-6■■■■■ 137.9
RPH3AL-214ENST00000574722 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.19■□□□□ 0.021e-6■■■■■ 78.6
RPH3AL-214ENST00000574722 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.66□□□□□ -0.067e-9■■■■■ 72.6
RPH3AL-214ENST00000574722 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.11■□□□□ 0.498e-7■■■■■ 52
RPH3AL-214ENST00000574722 DDX6P26196 483 aaKnown RBP eCLIP16.47■□□□□ 0.232e-8■■■■■ 51.7
RPH3AL-214ENST00000574722 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.92□□□□□ -0.182e-6■■■■■ 34.4
RPH3AL-214ENST00000574722 HNRNPKP61978 463 aaKnown RBP eCLIP15.51■□□□□ 0.071e-7■■■■■ 33.4
RPH3AL-214ENST00000574722 PCBP2Q15366 365 aaKnown RBP eCLIP14.58□□□□□ -0.086e-7■■■■■ 31.8
RPH3AL-214ENST00000574722 EIF3DO15371 548 aaKnown RBP eCLIP16.8■□□□□ 0.287e-7■■■■■ 29.4
RPH3AL-214ENST00000574722 SAFBQ15424 915 aaKnown RBP eCLIP17.46■□□□□ 0.391e-6■■■■■ 28.5
RPH3AL-214ENST00000574722 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.67■■□□□ 1.383e-7■■■■□ 26
RPH3AL-214ENST00000574722 ZC3H11AO75152 810 aaKnown RBP eCLIP16.97■□□□□ 0.319e-7■■■■□ 25.3
RPH3AL-214ENST00000574722 GTF2F1P35269 517 aaKnown RBP eCLIP16.84■□□□□ 0.299e-7■■■■□ 25.2
RPH3AL-214ENST00000574722 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.29■□□□□ 0.522e-7■■■■□ 23.1
RPH3AL-214ENST00000574722 RBFOX2O43251 390 aaKnown RBP eCLIP12.04□□□□□ -0.482e-12■■■■□ 22.8
RPH3AL-214ENST00000574722 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.11■□□□□ 0.494e-6■■■■□ 22.6
RPH3AL-214ENST00000574722 HNRNPMP52272 730 aaKnown RBP eCLIP24.14■■□□□ 1.456e-7■■■■□ 22.5
RPH3AL-214ENST00000574722 EFTUD2Q15029 972 aaKnown RBP eCLIP14.66□□□□□ -0.061e-6■■■■□ 22
RPH3AL-214ENST00000574722 HLTFQ14527 1009 aaKnown RBP eCLIP15.28■□□□□ 0.048e-6■■■■□ 21.3
RPH3AL-214ENST00000574722 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.44□□□□□ -0.16e-7■■■■□ 20.6
RPH3AL-214ENST00000574722 PRPF4O43172 522 aaKnown RBP eCLIP14.77□□□□□ -0.051e-6■■■■□ 19.9
RPH3AL-214ENST00000574722 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.05■□□□□ 0.164e-6■■■□□ 18.8
RPH3AL-214ENST00000574722 SF3A3Q12874 501 aaKnown RBP eCLIP13.7□□□□□ -0.225e-9■■■□□ 18.5
RPH3AL-214ENST00000574722 PPIGQ13427 754 aaKnown RBP eCLIP17.61■□□□□ 0.416e-8■■■□□ 18.3
RPH3AL-214ENST00000574722 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.64■□□□□ 0.258e-7■■■□□ 18.1
RPH3AL-214ENST00000574722 FUSP35637 526 aaKnown RBP eCLIP10.15□□□□□ -0.782e-7■■■□□ 15.9
RPH3AL-214ENST00000574722 SF3B4Q15427 424 aaKnown RBP eCLIP14.12□□□□□ -0.157e-8■■□□□ 14.3
RPH3AL-214ENST00000574722 MATR3P43243 847 aaKnown RBP eCLIP16.88■□□□□ 0.296e-6■■□□□ 12.4
RPH3AL-214ENST00000574722 NKRFO15226 690 aaKnown RBP eCLIP17.84■□□□□ 0.452e-6■□□□□ 11
RPH3AL-214ENST00000574722 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.59□□□□□ -0.071e-6■□□□□ 10.9
RPH3AL-214ENST00000574722 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.33□□□□□ -0.124e-7■□□□□ 10.1
RPH3AL-214ENST00000574722 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.45■■□□□ 1.343e-7■□□□□ 9.5
RPH3AL-214ENST00000574722 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.49■□□□□ 0.397e-11■□□□□ 8.4
Retrieved 33 of 33 RNA–protein pairs in 8.2 ms