RNA–Protein interactions for RNA: ENST00000573919.1

RNF213-217, Transcript of ring finger protein 213, humanhuman

TSL 3

Gene RNF213, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-217ENST00000573919 AEBP2Q6ZN18 517 aaPredicted RBP30.05■■■□□ 2.4
RNF213-217ENST00000573919 CHIC1Q5VXU3 224 aa29.5■■■□□ 2.31
RNF213-217ENST00000573919 PHF23Q9BUL5 403 aaPredicted RBP25.87■■□□□ 1.73
RNF213-217ENST00000573919 SENP3Q9H4L4 574 aaPredicted RBP25.63■■□□□ 1.69
RNF213-217ENST00000573919 PLPPR3Q6T4P5 718 aa24.03■■□□□ 1.44
RNF213-217ENST00000573919 FOXD1Q16676 465 aa23.68■■□□□ 1.38
RNF213-217ENST00000573919 ADRA2BP18089 450 aa22.78■■□□□ 1.24
RNF213-217ENST00000573919 PPP6R1Q9UPN7 881 aa22.78■■□□□ 1.24
RNF213-217ENST00000573919 PIAS4Q8N2W9 510 aaPredicted RBP22.39■■□□□ 1.17
RNF213-217ENST00000573919 NISCHQ9Y2I1 1504 aa21.98■■□□□ 1.11
RNF213-217ENST00000573919 MSH5O43196 834 aa21.94■■□□□ 1.1
RNF213-217ENST00000573919 PPP4R3CPQ6ZMV5 832 aa21.13■□□□□ 0.97
RNF213-217ENST00000573919 SCAF1Q9H7N4 1312 aaKnown RBP21.01■□□□□ 0.95
RNF213-217ENST00000573919 NCBP3Q53F19 620 aaKnown RBP20.68■□□□□ 0.9
RNF213-217ENST00000573919 KCNA4P22459 653 aa20.66■□□□□ 0.9
RNF213-217ENST00000573919 MAPK8IP2Q13387 824 aaPredicted RBP20.62■□□□□ 0.89
RNF213-217ENST00000573919 CNKSR2Q8WXI2 1034 aa20.57■□□□□ 0.88
RNF213-217ENST00000573919 DMRT2Q9Y5R5 561 aa20.44■□□□□ 0.86
RNF213-217ENST00000573919 NPM3O75607 178 aaKnown RBP20.28■□□□□ 0.84
RNF213-217ENST00000573919 RNF216Q9NWF9 866 aaPredicted RBP20.16■□□□□ 0.82
RNF213-217ENST00000573919 HOXD11P31277 338 aaPredicted RBP20.05■□□□□ 0.8
RNF213-217ENST00000573919 DNAJC5BQ9UF47 199 aa19.8■□□□□ 0.76
RNF213-217ENST00000573919 POTEDQ86YR6 584 aa19.76■□□□□ 0.75
RNF213-217ENST00000573919 SLC4A1APQ9BWU0 796 aaKnown RBP19.74■□□□□ 0.75
RNF213-217ENST00000573919 CCDC180Q9P1Z9 1646 aa19.65■□□□□ 0.74
RNF213-217ENST00000573919 DCAF8L1A6NGE4 600 aa19.5■□□□□ 0.71
RNF213-217ENST00000573919 EHMT2Q96KQ7 1210 aa19.18■□□□□ 0.66
RNF213-217ENST00000573919 SLC4A2P04920 1241 aa19.11■□□□□ 0.65
RNF213-217ENST00000573919 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.09■□□□□ 0.65
RNF213-217ENST00000573919 FOXD4L1Q9NU39 408 aa19.07■□□□□ 0.64
RNF213-217ENST00000573919 ZBTB22O15209 634 aa18.98■□□□□ 0.63
RNF213-217ENST00000573919 CSRNP3Q8WYN3 585 aa18.95■□□□□ 0.62
RNF213-217ENST00000573919 ABCC9O60706 1549 aa18.94■□□□□ 0.62
RNF213-217ENST00000573919 MYCNP04198 464 aaPredicted RBP18.8■□□□□ 0.6
RNF213-217ENST00000573919 U3KPZ7 1027 aaPredicted RBP18.76■□□□□ 0.59
RNF213-217ENST00000573919 RNF39Q9H2S5 420 aa18.74■□□□□ 0.59
RNF213-217ENST00000573919 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.68■□□□□ 0.58
RNF213-217ENST00000573919 HNRNPUL2Q1KMD3 747 aaKnown RBP18.68■□□□□ 0.58
RNF213-217ENST00000573919 C1QBPQ07021 282 aaKnown RBP18.57■□□□□ 0.56
RNF213-217ENST00000573919 SAMD1Q6SPF0 538 aaPredicted RBP18.57■□□□□ 0.56
RNF213-217ENST00000573919 APLP2Q06481 763 aa18.5■□□□□ 0.55
RNF213-217ENST00000573919 ATXN8OSP0DMR3 200 aa18.46■□□□□ 0.55
RNF213-217ENST00000573919 RB1CC1Q8TDY2 1594 aa18.39■□□□□ 0.53
RNF213-217ENST00000573919 NACADO15069 1562 aa18.38■□□□□ 0.53
RNF213-217ENST00000573919 ZCCHC6Q5VYS8 1495 aaKnown RBP18.37■□□□□ 0.53
RNF213-217ENST00000573919 MYO15BQ96JP2 1530 aa18.31■□□□□ 0.52
RNF213-217ENST00000573919 DCAF1Q9Y4B6 1507 aa18.26■□□□□ 0.51
RNF213-217ENST00000573919 CACNB1Q02641 598 aaPredicted RBP18.2■□□□□ 0.5
RNF213-217ENST00000573919 SPINK5Q9NQ38 1064 aaPredicted RBP18.18■□□□□ 0.5
RNF213-217ENST00000573919 DCAF8L2P0C7V8 631 aa18.17■□□□□ 0.5
RNF213-217ENST00000573919 CAPN15O75808 1086 aa18.16■□□□□ 0.5
RNF213-217ENST00000573919 ZNF219Q9P2Y4 722 aaPredicted RBP18.16■□□□□ 0.5
RNF213-217ENST00000573919 ATF5Q9Y2D1 282 aaPredicted RBP18.16■□□□□ 0.5
RNF213-217ENST00000573919 TRHP20396 242 aaPredicted RBP18.07■□□□□ 0.48
RNF213-217ENST00000573919 UNC13AQ9UPW8 1703 aa17.97■□□□□ 0.47
RNF213-217ENST00000573919 SCRIBQ14160 1630 aa17.83■□□□□ 0.45
RNF213-217ENST00000573919 DSG3P32926 999 aa17.83■□□□□ 0.44
RNF213-217ENST00000573919 POLA2Q14181 598 aa17.8■□□□□ 0.44
RNF213-217ENST00000573919 ABCB7O75027 752 aa17.76■□□□□ 0.43
RNF213-217ENST00000573919 BICRAQ9NZM4 1560 aa17.73■□□□□ 0.43
RNF213-217ENST00000573919 SHROOM4Q9ULL8 1493 aa17.72■□□□□ 0.43
RNF213-217ENST00000573919 ZBTB12Q9Y330 459 aaPredicted RBP17.63■□□□□ 0.41
RNF213-217ENST00000573919 PABPN1Q86U42 306 aaKnown RBP eCLIP17.6■□□□□ 0.41
RNF213-217ENST00000573919 FBLN2P98095 1184 aa17.55■□□□□ 0.4
RNF213-217ENST00000573919 MKRN4PQ13434 485 aaPredicted RBP17.41■□□□□ 0.38
RNF213-217ENST00000573919 EIF4G1Q04637 1599 aaKnown RBP17.3■□□□□ 0.36
RNF213-217ENST00000573919 CC2D2AQ9P2K1 1620 aa17.19■□□□□ 0.34
RNF213-217ENST00000573919 OSCARQ8IYS5 282 aa17.18■□□□□ 0.34
RNF213-217ENST00000573919 FKBP8Q14318 412 aa17.15■□□□□ 0.34
RNF213-217ENST00000573919 SPDYE2BA6NHP3 402 aa17.11■□□□□ 0.33
RNF213-217ENST00000573919 SPDYE6P0CI01 402 aa17.11■□□□□ 0.33
RNF213-217ENST00000573919 SPDYE2Q495Y8 402 aa17.11■□□□□ 0.33
RNF213-217ENST00000573919 SPDYE4A6NLX3 237 aa17.1■□□□□ 0.33
RNF213-217ENST00000573919 RBM42Q9BTD8 480 aaKnown RBP17.1■□□□□ 0.33
RNF213-217ENST00000573919 BAZ1AQ9NRL2 1556 aaPredicted RBP17.1■□□□□ 0.33
RNF213-217ENST00000573919 SMARCA4P51532 1647 aa17.08■□□□□ 0.32
RNF213-217ENST00000573919 CECR2Q9BXF3 1484 aa17.04■□□□□ 0.32
RNF213-217ENST00000573919 ZNF692Q9BU19 519 aaPredicted RBP17.01■□□□□ 0.31
RNF213-217ENST00000573919 SMARCA2P51531 1590 aa16.98■□□□□ 0.31
RNF213-217ENST00000573919 SSUH2Q9Y2M2 353 aa16.95■□□□□ 0.3
RNF213-217ENST00000573919 PEG3Q9GZU2 1588 aa16.93■□□□□ 0.3
RNF213-217ENST00000573919 HMGXB3Q12766 1538 aa16.91■□□□□ 0.3
RNF213-217ENST00000573919 MROH2BQ7Z745 1585 aa16.9■□□□□ 0.3
RNF213-217ENST00000573919 ATAD2BQ9ULI0 1458 aa16.89■□□□□ 0.29
RNF213-217ENST00000573919 NCAPD3P42695 1498 aa16.87■□□□□ 0.29
RNF213-217ENST00000573919 PROM2Q8N271 834 aa16.85■□□□□ 0.29
RNF213-217ENST00000573919 AKT1S1Q96B36 256 aa16.85■□□□□ 0.29
RNF213-217ENST00000573919 BAZ1BQ9UIG0 1483 aaKnown RBP16.82■□□□□ 0.28
RNF213-217ENST00000573919 WIZO95785 1651 aa16.76■□□□□ 0.27
RNF213-217ENST00000573919 RSF1Q96T23 1441 aaPredicted RBP16.72■□□□□ 0.27
RNF213-217ENST00000573919 TOP2AP11388 1531 aaKnown RBP16.65■□□□□ 0.26
RNF213-217ENST00000573919 REM2Q8IYK8 340 aaPredicted RBP16.64■□□□□ 0.25
RNF213-217ENST00000573919 FBXO3Q9UK99 471 aa16.64■□□□□ 0.25
RNF213-217ENST00000573919 STAG3Q9UJ98 1225 aa16.6■□□□□ 0.25
RNF213-217ENST00000573919 SPDYE1Q8NFV5 336 aaPredicted RBP16.59■□□□□ 0.25
RNF213-217ENST00000573919 LAMC3Q9Y6N6 1575 aa16.51■□□□□ 0.23
RNF213-217ENST00000573919 CLEC11AQ9Y240 323 aa16.45■□□□□ 0.22
RNF213-217ENST00000573919 PITPNM1O00562 1244 aa16.44■□□□□ 0.22
RNF213-217ENST00000573919 PRDM2Q13029 1718 aa16.4■□□□□ 0.22
RNF213-217ENST00000573919 ERCC6Q03468 1493 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms