RNA–Protein interactions for RNA: ENST00000570740.1

CDC27-211, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-211ENST00000570740 AEBP2Q6ZN18 517 aaPredicted RBP19.16■□□□□ 0.66
CDC27-211ENST00000570740 CHIC1Q5VXU3 224 aa18.47■□□□□ 0.55
CDC27-211ENST00000570740 SENP3Q9H4L4 574 aaPredicted RBP16.31■□□□□ 0.2
CDC27-211ENST00000570740 PHF23Q9BUL5 403 aaPredicted RBP16.21■□□□□ 0.19
CDC27-211ENST00000570740 FOXD1Q16676 465 aa15.15■□□□□ 0.02
CDC27-211ENST00000570740 PLPPR3Q6T4P5 718 aa14.87□□□□□ -0.03
CDC27-211ENST00000570740 PPP6R1Q9UPN7 881 aa14.38□□□□□ -0.11
CDC27-211ENST00000570740 ADRA2BP18089 450 aa14.34□□□□□ -0.11
CDC27-211ENST00000570740 PIAS4Q8N2W9 510 aaPredicted RBP14.22□□□□□ -0.13
CDC27-211ENST00000570740 MSH5O43196 834 aa14.09□□□□□ -0.15
CDC27-211ENST00000570740 POTEDQ86YR6 584 aa13.28□□□□□ -0.28
CDC27-211ENST00000570740 SCAF1Q9H7N4 1312 aaKnown RBP13.13□□□□□ -0.31
CDC27-211ENST00000570740 MAPK8IP2Q13387 824 aaPredicted RBP13.09□□□□□ -0.31
CDC27-211ENST00000570740 PPP4R3CPQ6ZMV5 832 aa13.07□□□□□ -0.32
CDC27-211ENST00000570740 DMRT2Q9Y5R5 561 aa12.98□□□□□ -0.33
CDC27-211ENST00000570740 CNKSR2Q8WXI2 1034 aa12.77□□□□□ -0.37
CDC27-211ENST00000570740 NCBP3Q53F19 620 aaKnown RBP12.65□□□□□ -0.38
CDC27-211ENST00000570740 HOXD11P31277 338 aaPredicted RBP12.61□□□□□ -0.39
CDC27-211ENST00000570740 RNF216Q9NWF9 866 aaPredicted RBP12.59□□□□□ -0.39
CDC27-211ENST00000570740 NPM3O75607 178 aaKnown RBP12.47□□□□□ -0.41
CDC27-211ENST00000570740 KCNA4P22459 653 aa12.47□□□□□ -0.41
CDC27-211ENST00000570740 DCAF8L1A6NGE4 600 aa12.39□□□□□ -0.43
CDC27-211ENST00000570740 DNAJC5BQ9UF47 199 aa12.19□□□□□ -0.46
CDC27-211ENST00000570740 RNF39Q9H2S5 420 aa12.05□□□□□ -0.48
CDC27-211ENST00000570740 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.99□□□□□ -0.49
CDC27-211ENST00000570740 CACNB1Q02641 598 aaPredicted RBP11.9□□□□□ -0.5
CDC27-211ENST00000570740 C1QBPQ07021 282 aaKnown RBP11.89□□□□□ -0.51
CDC27-211ENST00000570740 SLC4A2P04920 1241 aa11.84□□□□□ -0.51
CDC27-211ENST00000570740 SLC4A1APQ9BWU0 796 aaKnown RBP11.82□□□□□ -0.52
CDC27-211ENST00000570740 U3KPZ7 1027 aaPredicted RBP11.78□□□□□ -0.52
CDC27-211ENST00000570740 FOXD4L1Q9NU39 408 aa11.56□□□□□ -0.56
CDC27-211ENST00000570740 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.55□□□□□ -0.56
CDC27-211ENST00000570740 HNRNPUL2Q1KMD3 747 aaKnown RBP11.55□□□□□ -0.56
CDC27-211ENST00000570740 MYCNP04198 464 aaPredicted RBP11.53□□□□□ -0.56
CDC27-211ENST00000570740 SPINK5Q9NQ38 1064 aaPredicted RBP11.52□□□□□ -0.57
CDC27-211ENST00000570740 SAMD1Q6SPF0 538 aaPredicted RBP11.49□□□□□ -0.57
CDC27-211ENST00000570740 CAPN15O75808 1086 aa11.48□□□□□ -0.57
CDC27-211ENST00000570740 APLP2Q06481 763 aa11.48□□□□□ -0.57
CDC27-211ENST00000570740 ZBTB22O15209 634 aa11.47□□□□□ -0.57
CDC27-211ENST00000570740 DSG3P32926 999 aa11.37□□□□□ -0.59
CDC27-211ENST00000570740 ZNF219Q9P2Y4 722 aaPredicted RBP11.37□□□□□ -0.59
CDC27-211ENST00000570740 TRHP20396 242 aaPredicted RBP11.36□□□□□ -0.59
CDC27-211ENST00000570740 ABCB7O75027 752 aa11.24□□□□□ -0.61
CDC27-211ENST00000570740 ATF5Q9Y2D1 282 aaPredicted RBP11.24□□□□□ -0.61
CDC27-211ENST00000570740 ATXN8OSP0DMR3 200 aa11.19□□□□□ -0.62
CDC27-211ENST00000570740 CSRNP3Q8WYN3 585 aa11.19□□□□□ -0.62
CDC27-211ENST00000570740 EHMT2Q96KQ7 1210 aa11.16□□□□□ -0.62
CDC27-211ENST00000570740 POLA2Q14181 598 aa11.13□□□□□ -0.63
CDC27-211ENST00000570740 ZBTB12Q9Y330 459 aaPredicted RBP10.94□□□□□ -0.66
CDC27-211ENST00000570740 RBM42Q9BTD8 480 aaKnown RBP10.84□□□□□ -0.67
CDC27-211ENST00000570740 FBLN2P98095 1184 aa10.77□□□□□ -0.69
CDC27-211ENST00000570740 OSCARQ8IYS5 282 aa10.76□□□□□ -0.69
CDC27-211ENST00000570740 MKRN4PQ13434 485 aaPredicted RBP10.74□□□□□ -0.69
CDC27-211ENST00000570740 AKT1S1Q96B36 256 aa10.66□□□□□ -0.7
CDC27-211ENST00000570740 SPDYE2BA6NHP3 402 aa10.62□□□□□ -0.71
CDC27-211ENST00000570740 SPDYE6P0CI01 402 aa10.62□□□□□ -0.71
CDC27-211ENST00000570740 SPDYE2Q495Y8 402 aa10.62□□□□□ -0.71
CDC27-211ENST00000570740 REM2Q8IYK8 340 aaPredicted RBP10.54□□□□□ -0.72
CDC27-211ENST00000570740 ZNF692Q9BU19 519 aaPredicted RBP10.53□□□□□ -0.72
CDC27-211ENST00000570740 SSUH2Q9Y2M2 353 aa10.52□□□□□ -0.73
CDC27-211ENST00000570740 CHRDL2Q6WN34 429 aa10.49□□□□□ -0.73
CDC27-211ENST00000570740 POTEHQ6S545 545 aa10.46□□□□□ -0.73
CDC27-211ENST00000570740 PITPNM1O00562 1244 aa10.43□□□□□ -0.74
CDC27-211ENST00000570740 PABPN1Q86U42 306 aaKnown RBP eCLIP10.38□□□□□ -0.75
CDC27-211ENST00000570740 SPDYE1Q8NFV5 336 aaPredicted RBP10.37□□□□□ -0.75
CDC27-211ENST00000570740 SPDYE4A6NLX3 237 aa10.36□□□□□ -0.75
CDC27-211ENST00000570740 CLEC11AQ9Y240 323 aa10.32□□□□□ -0.76
CDC27-211ENST00000570740 PIP4P2Q8N4L2 257 aa10.31□□□□□ -0.76
CDC27-211ENST00000570740 FXR2P51116 673 aaKnown RBP eCLIP10.3□□□□□ -0.76
CDC27-211ENST00000570740 PRR29P0C7W0 189 aa10.2□□□□□ -0.78
CDC27-211ENST00000570740 PROM2Q8N271 834 aa10.18□□□□□ -0.78
CDC27-211ENST00000570740 PRKAR2AP13861 404 aaKnown RBP10.16□□□□□ -0.78
CDC27-211ENST00000570740 STAG3Q9UJ98 1225 aa10.16□□□□□ -0.78
CDC27-211ENST00000570740 FKBP8Q14318 412 aa10.11□□□□□ -0.79
CDC27-211ENST00000570740 CHADLQ6NUI6 762 aa10.09□□□□□ -0.79
CDC27-211ENST00000570740 HAX1O00165 279 aa10.02□□□□□ -0.81
CDC27-211ENST00000570740 CREBZFQ9NS37 354 aa10.02□□□□□ -0.81
CDC27-211ENST00000570740 FARP1Q9Y4F1 1045 aaPredicted RBP9.99□□□□□ -0.81
CDC27-211ENST00000570740 C19orf67A6NJJ6 358 aa9.96□□□□□ -0.82
CDC27-211ENST00000570740 SP7Q8TDD2 431 aaPredicted RBP9.94□□□□□ -0.82
CDC27-211ENST00000570740 EVX2Q03828 476 aa9.93□□□□□ -0.82
CDC27-211ENST00000570740 MNX1P50219 401 aaPredicted RBP9.89□□□□□ -0.83
CDC27-211ENST00000570740 CD44P16070 742 aaKnown RBP9.85□□□□□ -0.83
CDC27-211ENST00000570740 NPM1P06748 294 aaKnown RBP eCLIP9.84□□□□□ -0.83
CDC27-211ENST00000570740 MIER1Q8N108 512 aa9.84□□□□□ -0.83
CDC27-211ENST00000570740 FBXO3Q9UK99 471 aa9.84□□□□□ -0.83
CDC27-211ENST00000570740 PLEKHG5O94827 1062 aa9.82□□□□□ -0.84
CDC27-211ENST00000570740 PLCD3Q8N3E9 789 aa9.8□□□□□ -0.84
CDC27-211ENST00000570740 ZRANB1Q9UGI0 708 aa9.75□□□□□ -0.85
CDC27-211ENST00000570740 GABBR2O75899 941 aa9.73□□□□□ -0.85
CDC27-211ENST00000570740 PAK3O75914 559 aaPredicted RBP9.73□□□□□ -0.85
CDC27-211ENST00000570740 ZNF579Q8NAF0 562 aaKnown RBP9.73□□□□□ -0.85
CDC27-211ENST00000570740 ZBTB47Q9UFB7 747 aaPredicted RBP9.72□□□□□ -0.85
CDC27-211ENST00000570740 VASPP50552 380 aaPredicted RBP9.71□□□□□ -0.86
CDC27-211ENST00000570740 CLCN6P51797 869 aa9.7□□□□□ -0.86
CDC27-211ENST00000570740 NUBP1P53384 320 aa9.65□□□□□ -0.86
CDC27-211ENST00000570740 RASEFQ8IZ41 740 aa9.65□□□□□ -0.86
CDC27-211ENST00000570740 TSPYL2Q9H2G4 693 aaPredicted RBP9.65□□□□□ -0.86
CDC27-211ENST00000570740 PHF12Q96QT6 1004 aa9.64□□□□□ -0.87
CDC27-211ENST00000570740 CCDC61Q9Y6R9 512 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms