RNA–Protein interactions for RNA: ENST00000568943.5

SLC6A2-209, Transcript of solute carrier family 6 member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A2, Length 2,471 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A2-209ENST00000568943 NISCHQ9Y2I1 1504 aa34.23■■■■□ 3.07
SLC6A2-209ENST00000568943 CCDC180Q9P1Z9 1646 aa29.55■■■□□ 2.32
SLC6A2-209ENST00000568943 ZCCHC6Q5VYS8 1495 aaKnown RBP28.88■■■□□ 2.21
SLC6A2-209ENST00000568943 SHROOM4Q9ULL8 1493 aa28.87■■■□□ 2.21
SLC6A2-209ENST00000568943 SUPT5HO00267 1087 aaKnown RBP28.42■■■□□ 2.14
SLC6A2-209ENST00000568943 DCAF1Q9Y4B6 1507 aa28.26■■■□□ 2.11
SLC6A2-209ENST00000568943 DCAF8L2P0C7V8 631 aa28.24■■■□□ 2.11
SLC6A2-209ENST00000568943 MYO15BQ96JP2 1530 aa27.79■■■□□ 2.04
SLC6A2-209ENST00000568943 CHIC1Q5VXU3 224 aa27.76■■■□□ 2.03
SLC6A2-209ENST00000568943 ABCC9O60706 1549 aa27.47■■□□□ 1.99
SLC6A2-209ENST00000568943 HRCP23327 699 aa27.42■■□□□ 1.98
SLC6A2-209ENST00000568943 NACADO15069 1562 aa27.39■■□□□ 1.97
SLC6A2-209ENST00000568943 SCRIBQ14160 1630 aa27.35■■□□□ 1.97
SLC6A2-209ENST00000568943 PCGF6Q9BYE7 350 aa27.2■■□□□ 1.94
SLC6A2-209ENST00000568943 RB1CC1Q8TDY2 1594 aa27.04■■□□□ 1.92
SLC6A2-209ENST00000568943 LOC105371045A0A1W2PR82 267 aa26.95■■□□□ 1.9
SLC6A2-209ENST00000568943 PPARGC1BQ86YN6 1023 aaKnown RBP26.81■■□□□ 1.88
SLC6A2-209ENST00000568943 RSF1Q96T23 1441 aaPredicted RBP26.8■■□□□ 1.88
SLC6A2-209ENST00000568943 TRIM26Q12899 539 aaPredicted RBP26.61■■□□□ 1.85
SLC6A2-209ENST00000568943 CECR2Q9BXF3 1484 aa26.56■■□□□ 1.84
SLC6A2-209ENST00000568943 UNC13AQ9UPW8 1703 aa26.52■■□□□ 1.84
SLC6A2-209ENST00000568943 MROH2BQ7Z745 1585 aa26.48■■□□□ 1.83
SLC6A2-209ENST00000568943 TRIM41Q8WV44 630 aa26.43■■□□□ 1.82
SLC6A2-209ENST00000568943 BAZ1AQ9NRL2 1556 aaPredicted RBP26.41■■□□□ 1.82
SLC6A2-209ENST00000568943 WIZO95785 1651 aa26.33■■□□□ 1.81
SLC6A2-209ENST00000568943 FAM9AQ8IZU1 332 aaPredicted RBP26.26■■□□□ 1.79
SLC6A2-209ENST00000568943 SMARCA4P51532 1647 aa26.2■■□□□ 1.79
SLC6A2-209ENST00000568943 ZEB1P37275 1124 aaPredicted RBP26.16■■□□□ 1.78
SLC6A2-209ENST00000568943 BICRAQ9NZM4 1560 aa26.16■■□□□ 1.78
SLC6A2-209ENST00000568943 TOP2AP11388 1531 aaKnown RBP26.05■■□□□ 1.76
SLC6A2-209ENST00000568943 PABPN1Q86U42 306 aaKnown RBP eCLIP26.05■■□□□ 1.76
SLC6A2-209ENST00000568943 EHMT2Q96KQ7 1210 aa26.04■■□□□ 1.76
SLC6A2-209ENST00000568943 EIF4G1Q04637 1599 aaKnown RBP25.83■■□□□ 1.72
SLC6A2-209ENST00000568943 SMARCA2P51531 1590 aa25.82■■□□□ 1.72
SLC6A2-209ENST00000568943 PEG3Q9GZU2 1588 aa25.81■■□□□ 1.72
SLC6A2-209ENST00000568943 CCDC88BA6NC98 1476 aa25.79■■□□□ 1.72
SLC6A2-209ENST00000568943 ATAD2BQ9ULI0 1458 aa25.6■■□□□ 1.69
SLC6A2-209ENST00000568943 ABCC8Q09428 1581 aa25.56■■□□□ 1.68
SLC6A2-209ENST00000568943 BAZ1BQ9UIG0 1483 aaKnown RBP25.55■■□□□ 1.68
SLC6A2-209ENST00000568943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.51■■□□□ 1.67
SLC6A2-209ENST00000568943 CCER1Q8TC90 406 aaPredicted RBP25.46■■□□□ 1.67
SLC6A2-209ENST00000568943 SCAF1Q9H7N4 1312 aaKnown RBP25.45■■□□□ 1.66
SLC6A2-209ENST00000568943 WRNQ14191 1432 aaPredicted RBP eCLIP25.42■■□□□ 1.66
SLC6A2-209ENST00000568943 CEP162Q5TB80 1403 aa25.39■■□□□ 1.65
SLC6A2-209ENST00000568943 SOGA1O94964 1423 aa25.35■■□□□ 1.65
SLC6A2-209ENST00000568943 TNIKQ9UKE5 1360 aa25.3■■□□□ 1.64
SLC6A2-209ENST00000568943 TTBK1Q5TCY1 1321 aaPredicted RBP25.3■■□□□ 1.64
SLC6A2-209ENST00000568943 HMGXB3Q12766 1538 aa25.29■■□□□ 1.64
SLC6A2-209ENST00000568943 EEA1Q15075 1411 aa25.26■■□□□ 1.63
SLC6A2-209ENST00000568943 NCAPD3P42695 1498 aa25.25■■□□□ 1.63
SLC6A2-209ENST00000568943 PELP1Q8IZL8 1130 aaKnown RBP25.25■■□□□ 1.63
SLC6A2-209ENST00000568943 RUSC2Q8N2Y8 1516 aa25.22■■□□□ 1.63
SLC6A2-209ENST00000568943 CSRNP3Q8WYN3 585 aa25.2■■□□□ 1.62
SLC6A2-209ENST00000568943 UBTFP17480 764 aaKnown RBP25.14■■□□□ 1.62
SLC6A2-209ENST00000568943 GOLGA3Q08378 1498 aa25.14■■□□□ 1.61
SLC6A2-209ENST00000568943 DIEXFQ68CQ4 756 aaKnown RBP25.11■■□□□ 1.61
SLC6A2-209ENST00000568943 ACIN1Q9UKV3 1341 aaKnown RBP25.11■■□□□ 1.61
SLC6A2-209ENST00000568943 SYNJ1O43426 1573 aa25.11■■□□□ 1.61
SLC6A2-209ENST00000568943 NEUROD1Q13562 356 aa25.05■■□□□ 1.6
SLC6A2-209ENST00000568943 CEP164Q9UPV0 1460 aa24.95■■□□□ 1.58
SLC6A2-209ENST00000568943 TOP2BQ02880 1626 aa24.95■■□□□ 1.58
SLC6A2-209ENST00000568943 KIF21BO75037 1637 aa24.94■■□□□ 1.58
SLC6A2-209ENST00000568943 CENPBP07199 599 aaPredicted RBP24.93■■□□□ 1.58
SLC6A2-209ENST00000568943 BIVM-ERCC5R4GMW8 1640 aa24.9■■□□□ 1.58
SLC6A2-209ENST00000568943 CFTRP13569 1480 aa24.88■■□□□ 1.57
SLC6A2-209ENST00000568943 ZNF316A6NFI3 1004 aaPredicted RBP24.86■■□□□ 1.57
SLC6A2-209ENST00000568943 CC2D2AQ9P2K1 1620 aa24.85■■□□□ 1.57
SLC6A2-209ENST00000568943 CLIP1P30622 1438 aa24.85■■□□□ 1.57
SLC6A2-209ENST00000568943 PRDM2Q13029 1718 aa24.83■■□□□ 1.57
SLC6A2-209ENST00000568943 GTF3C3Q9Y5Q9 886 aa24.83■■□□□ 1.56
SLC6A2-209ENST00000568943 VPS8Q8N3P4 1428 aa24.78■■□□□ 1.56
SLC6A2-209ENST00000568943 HNRNPUL2Q1KMD3 747 aaKnown RBP24.78■■□□□ 1.56
SLC6A2-209ENST00000568943 RAPGEF2Q9Y4G8 1499 aa24.73■■□□□ 1.55
SLC6A2-209ENST00000568943 CUX1P39880 1505 aa24.72■■□□□ 1.55
SLC6A2-209ENST00000568943 CADPSQ9ULU8 1353 aa24.69■■□□□ 1.54
SLC6A2-209ENST00000568943 APLP2Q06481 763 aa24.65■■□□□ 1.54
SLC6A2-209ENST00000568943 RANGAP1P46060 587 aaPredicted RBP24.59■■□□□ 1.53
SLC6A2-209ENST00000568943 YTHDC1Q96MU7 727 aaKnown RBP24.57■■□□□ 1.52
SLC6A2-209ENST00000568943 KIF27Q86VH2 1401 aa24.56■■□□□ 1.52
SLC6A2-209ENST00000568943 ERICH3Q5RHP9 1530 aa24.55■■□□□ 1.52
SLC6A2-209ENST00000568943 MIER1Q8N108 512 aa24.54■■□□□ 1.52
SLC6A2-209ENST00000568943 PRXQ9BXM0 1461 aa24.5■■□□□ 1.51
SLC6A2-209ENST00000568943 FANCD2Q9BXW9 1451 aa24.44■■□□□ 1.5
SLC6A2-209ENST00000568943 ARAP1Q96P48 1450 aa24.43■■□□□ 1.5
SLC6A2-209ENST00000568943 FGD5Q6ZNL6 1462 aa24.38■■□□□ 1.49
SLC6A2-209ENST00000568943 CUX2O14529 1486 aa24.36■■□□□ 1.49
SLC6A2-209ENST00000568943 DHX57Q6P158 1386 aaKnown RBP24.35■■□□□ 1.49
SLC6A2-209ENST00000568943 CLSPNQ9HAW4 1339 aa24.33■■□□□ 1.49
SLC6A2-209ENST00000568943 LAMC3Q9Y6N6 1575 aa24.33■■□□□ 1.49
SLC6A2-209ENST00000568943 DNMBPQ6XZF7 1577 aa24.32■■□□□ 1.48
SLC6A2-209ENST00000568943 KANK4Q5T7N3 995 aaPredicted RBP24.3■■□□□ 1.48
SLC6A2-209ENST00000568943 NESP48681 1621 aa24.29■■□□□ 1.48
SLC6A2-209ENST00000568943 RRBP1Q9P2E9 1410 aaKnown RBP24.24■■□□□ 1.47
SLC6A2-209ENST00000568943 TOPBP1Q92547 1522 aa24.23■■□□□ 1.47
SLC6A2-209ENST00000568943 IGF1RP08069 1367 aa24.23■■□□□ 1.47
SLC6A2-209ENST00000568943 POLA1P09884 1462 aaPredicted RBP24.17■■□□□ 1.46
SLC6A2-209ENST00000568943 ARHGAP35Q9NRY4 1499 aa24.16■■□□□ 1.46
SLC6A2-209ENST00000568943 CARMIL1Q5VZK9 1371 aa24.16■■□□□ 1.46
SLC6A2-209ENST00000568943 ABCA10Q8WWZ4 1543 aa24.15■■□□□ 1.46
SLC6A2-209ENST00000568943 PDS5BQ9NTI5 1447 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms