RNA–Protein interactions for RNA: ENST00000568733.5

NUB1-212, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NUB1, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-212ENST00000568733 NISCHQ9Y2I1 1504 aa28.81■■■□□ 2.2
NUB1-212ENST00000568733 DCAF8L2P0C7V8 631 aa26.07■■□□□ 1.76
NUB1-212ENST00000568733 SHROOM4Q9ULL8 1493 aa25.11■■□□□ 1.61
NUB1-212ENST00000568733 ABCC9O60706 1549 aa25.03■■□□□ 1.6
NUB1-212ENST00000568733 CCDC180Q9P1Z9 1646 aa24.41■■□□□ 1.5
NUB1-212ENST00000568733 SUPT5HO00267 1087 aaKnown RBP24.15■■□□□ 1.46
NUB1-212ENST00000568733 PABPN1Q86U42 306 aaKnown RBP eCLIP24.13■■□□□ 1.45
NUB1-212ENST00000568733 ZCCHC6Q5VYS8 1495 aaKnown RBP23.96■■□□□ 1.43
NUB1-212ENST00000568733 SCRIBQ14160 1630 aa23.68■■□□□ 1.38
NUB1-212ENST00000568733 RB1CC1Q8TDY2 1594 aa23.24■■□□□ 1.31
NUB1-212ENST00000568733 NACADO15069 1562 aa23.18■■□□□ 1.3
NUB1-212ENST00000568733 CECR2Q9BXF3 1484 aa23.02■■□□□ 1.28
NUB1-212ENST00000568733 DCAF1Q9Y4B6 1507 aa23.01■■□□□ 1.27
NUB1-212ENST00000568733 EHMT2Q96KQ7 1210 aa22.96■■□□□ 1.27
NUB1-212ENST00000568733 DNAJC5BQ9UF47 199 aa22.73■■□□□ 1.23
NUB1-212ENST00000568733 MYO15BQ96JP2 1530 aa22.66■■□□□ 1.22
NUB1-212ENST00000568733 UNC13AQ9UPW8 1703 aa22.64■■□□□ 1.21
NUB1-212ENST00000568733 MROH2BQ7Z745 1585 aa22.6■■□□□ 1.21
NUB1-212ENST00000568733 FAM9AQ8IZU1 332 aaPredicted RBP22.6■■□□□ 1.21
NUB1-212ENST00000568733 RSF1Q96T23 1441 aaPredicted RBP22.6■■□□□ 1.21
NUB1-212ENST00000568733 BICRAQ9NZM4 1560 aa22.59■■□□□ 1.21
NUB1-212ENST00000568733 WIZO95785 1651 aa22.38■■□□□ 1.17
NUB1-212ENST00000568733 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
NUB1-212ENST00000568733 TRIM41Q8WV44 630 aa22.2■■□□□ 1.14
NUB1-212ENST00000568733 BAZ1AQ9NRL2 1556 aaPredicted RBP22.16■■□□□ 1.14
NUB1-212ENST00000568733 RANGAP1P46060 587 aaPredicted RBP22.13■■□□□ 1.13
NUB1-212ENST00000568733 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
NUB1-212ENST00000568733 SMARCA4P51532 1647 aa22.1■■□□□ 1.13
NUB1-212ENST00000568733 BAZ1BQ9UIG0 1483 aaKnown RBP22.07■■□□□ 1.12
NUB1-212ENST00000568733 LOC105371045A0A1W2PR82 267 aa22.06■■□□□ 1.12
NUB1-212ENST00000568733 ATAD2BQ9ULI0 1458 aa22.05■■□□□ 1.12
NUB1-212ENST00000568733 CC2D2AQ9P2K1 1620 aa21.97■■□□□ 1.11
NUB1-212ENST00000568733 CCDC88BA6NC98 1476 aa21.95■■□□□ 1.1
NUB1-212ENST00000568733 NESP48681 1621 aa21.79■■□□□ 1.08
NUB1-212ENST00000568733 TTBK1Q5TCY1 1321 aaPredicted RBP21.76■■□□□ 1.07
NUB1-212ENST00000568733 ABCC8Q09428 1581 aa21.73■■□□□ 1.07
NUB1-212ENST00000568733 SMARCA2P51531 1590 aa21.7■■□□□ 1.06
NUB1-212ENST00000568733 TOP2AP11388 1531 aaKnown RBP21.67■■□□□ 1.06
NUB1-212ENST00000568733 PPARGC1BQ86YN6 1023 aaKnown RBP21.67■■□□□ 1.06
NUB1-212ENST00000568733 NCAPD3P42695 1498 aa21.64■■□□□ 1.05
NUB1-212ENST00000568733 UBTFP17480 764 aaKnown RBP21.55■■□□□ 1.04
NUB1-212ENST00000568733 FBLN2P98095 1184 aa21.49■■□□□ 1.03
NUB1-212ENST00000568733 CADPSQ9ULU8 1353 aa21.47■■□□□ 1.03
NUB1-212ENST00000568733 SOGA1O94964 1423 aa21.39■■□□□ 1.01
NUB1-212ENST00000568733 ERCC6Q03468 1493 aa21.38■■□□□ 1.01
NUB1-212ENST00000568733 WRNQ14191 1432 aaPredicted RBP eCLIP21.37■■□□□ 1.01
NUB1-212ENST00000568733 RUSC2Q8N2Y8 1516 aa21.37■■□□□ 1.01
NUB1-212ENST00000568733 P3H3Q8IVL6 736 aa21.3■■□□□ 1
NUB1-212ENST00000568733 ATP1B4Q9UN42 357 aaPredicted RBP21.3■■□□□ 1
NUB1-212ENST00000568733 PEG3Q9GZU2 1588 aa21.29■■□□□ 1
NUB1-212ENST00000568733 TDRD9Q8NDG6 1382 aaKnown RBP21.28■■□□□ 1
NUB1-212ENST00000568733 FANCD2Q9BXW9 1451 aa21.27■■□□□ 1
NUB1-212ENST00000568733 HMGXB3Q12766 1538 aa21.27■■□□□ 1
NUB1-212ENST00000568733 CSRNP3Q8WYN3 585 aa21.23■□□□□ 0.99
NUB1-212ENST00000568733 ARID3CA6NKF2 412 aa21.22■□□□□ 0.99
NUB1-212ENST00000568733 RAD54L2Q9Y4B4 1467 aa21.2■□□□□ 0.98
NUB1-212ENST00000568733 CFTRP13569 1480 aa21.19■□□□□ 0.98
NUB1-212ENST00000568733 PDS5BQ9NTI5 1447 aa21.11■□□□□ 0.97
NUB1-212ENST00000568733 SYNJ1O43426 1573 aa21.1■□□□□ 0.97
NUB1-212ENST00000568733 CEP164Q9UPV0 1460 aa21.07■□□□□ 0.96
NUB1-212ENST00000568733 CUX2O14529 1486 aa21.04■□□□□ 0.96
NUB1-212ENST00000568733 CUX1P39880 1505 aa21.02■□□□□ 0.96
NUB1-212ENST00000568733 AQRO60306 1485 aaKnown RBP eCLIP21■□□□□ 0.955e-7■■□□□ 12.3
NUB1-212ENST00000568733 FGD5Q6ZNL6 1462 aa20.99■□□□□ 0.95
NUB1-212ENST00000568733 URB2Q14146 1524 aaKnown RBP20.93■□□□□ 0.94
NUB1-212ENST00000568733 CHMP7Q8WUX9 453 aaPredicted RBP20.9■□□□□ 0.94
NUB1-212ENST00000568733 PCGF6Q9BYE7 350 aa20.88■□□□□ 0.93
NUB1-212ENST00000568733 KIF21AQ7Z4S6 1674 aa20.88■□□□□ 0.93
NUB1-212ENST00000568733 TOPBP1Q92547 1522 aa20.87■□□□□ 0.93
NUB1-212ENST00000568733 POLA1P09884 1462 aaPredicted RBP20.85■□□□□ 0.93
NUB1-212ENST00000568733 ZNF608Q9ULD9 1512 aaPredicted RBP20.84■□□□□ 0.93
NUB1-212ENST00000568733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.81■□□□□ 0.92
NUB1-212ENST00000568733 HNRNPUL2Q1KMD3 747 aaKnown RBP20.81■□□□□ 0.92
NUB1-212ENST00000568733 KIF27Q86VH2 1401 aa20.79■□□□□ 0.92
NUB1-212ENST00000568733 RAPGEF2Q9Y4G8 1499 aa20.78■□□□□ 0.92
NUB1-212ENST00000568733 LAMC3Q9Y6N6 1575 aa20.78■□□□□ 0.92
NUB1-212ENST00000568733 CARMIL1Q5VZK9 1371 aa20.75■□□□□ 0.91
NUB1-212ENST00000568733 IGF1RP08069 1367 aa20.74■□□□□ 0.91
NUB1-212ENST00000568733 MRC2Q9UBG0 1479 aa20.71■□□□□ 0.91
NUB1-212ENST00000568733 ITGAEP38570 1179 aa20.7■□□□□ 0.9
NUB1-212ENST00000568733 APLP2Q06481 763 aa20.68■□□□□ 0.9
NUB1-212ENST00000568733 TOP2BQ02880 1626 aa20.67■□□□□ 0.9
NUB1-212ENST00000568733 GAPVD1Q14C86 1478 aa20.61■□□□□ 0.89
NUB1-212ENST00000568733 DNMBPQ6XZF7 1577 aa20.59■□□□□ 0.89
NUB1-212ENST00000568733 CEP162Q5TB80 1403 aa20.56■□□□□ 0.88
NUB1-212ENST00000568733 CLIP1P30622 1438 aa20.5■□□□□ 0.87
NUB1-212ENST00000568733 GOLGA3Q08378 1498 aa20.49■□□□□ 0.87
NUB1-212ENST00000568733 SNAPC4Q5SXM2 1469 aa20.45■□□□□ 0.86
NUB1-212ENST00000568733 JPH4Q96JJ6 628 aa20.41■□□□□ 0.86
NUB1-212ENST00000568733 BIVM-ERCC5R4GMW8 1640 aa20.4■□□□□ 0.86
NUB1-212ENST00000568733 KANK4Q5T7N3 995 aaPredicted RBP20.4■□□□□ 0.86
NUB1-212ENST00000568733 FHOD3Q2V2M9 1422 aa20.4■□□□□ 0.86
NUB1-212ENST00000568733 ABCA10Q8WWZ4 1543 aa20.38■□□□□ 0.85
NUB1-212ENST00000568733 TNIKQ9UKE5 1360 aa20.38■□□□□ 0.85
NUB1-212ENST00000568733 KCNH8Q96L42 1107 aa20.37■□□□□ 0.85
NUB1-212ENST00000568733 EEA1Q15075 1411 aa20.37■□□□□ 0.85
NUB1-212ENST00000568733 IFT140Q96RY7 1462 aa20.36■□□□□ 0.85
NUB1-212ENST00000568733 CYB5RLQ6IPT4 315 aa20.34■□□□□ 0.85
NUB1-212ENST00000568733 GRIN2BQ13224 1484 aa20.31■□□□□ 0.84
NUB1-212ENST00000568733 PRXQ9BXM0 1461 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms