RNA–Protein interactions for RNA: ENST00000568445.1

CENPN-208, Transcript of centromere protein N, humanhuman

TSL 5

Gene CENPN, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPN-208ENST00000568445 AEBP2Q6ZN18 517 aaPredicted RBP27.97■■■□□ 2.07
CENPN-208ENST00000568445 CHIC1Q5VXU3 224 aa26.38■■□□□ 1.81
CENPN-208ENST00000568445 SENP3Q9H4L4 574 aaPredicted RBP23.82■■□□□ 1.4
CENPN-208ENST00000568445 PHF23Q9BUL5 403 aaPredicted RBP23.53■■□□□ 1.36
CENPN-208ENST00000568445 FOXD1Q16676 465 aa22.27■■□□□ 1.16
CENPN-208ENST00000568445 PLPPR3Q6T4P5 718 aa20.99■□□□□ 0.95
CENPN-208ENST00000568445 MSH5O43196 834 aa20.83■□□□□ 0.93
CENPN-208ENST00000568445 PIAS4Q8N2W9 510 aaPredicted RBP20.77■□□□□ 0.92
CENPN-208ENST00000568445 PPP6R1Q9UPN7 881 aa20.74■□□□□ 0.91
CENPN-208ENST00000568445 ADRA2BP18089 450 aa20.66■□□□□ 0.9
CENPN-208ENST00000568445 POTEDQ86YR6 584 aa20.64■□□□□ 0.89
CENPN-208ENST00000568445 MAPK8IP2Q13387 824 aaPredicted RBP19.05■□□□□ 0.64
CENPN-208ENST00000568445 DMRT2Q9Y5R5 561 aa18.88■□□□□ 0.61
CENPN-208ENST00000568445 SCAF1Q9H7N4 1312 aaKnown RBP18.82■□□□□ 0.6
CENPN-208ENST00000568445 PPP4R3CPQ6ZMV5 832 aa18.42■□□□□ 0.54
CENPN-208ENST00000568445 DCAF8L1A6NGE4 600 aa18.17■□□□□ 0.5
CENPN-208ENST00000568445 HOXD11P31277 338 aaPredicted RBP18.12■□□□□ 0.49
CENPN-208ENST00000568445 CNKSR2Q8WXI2 1034 aa18.07■□□□□ 0.48
CENPN-208ENST00000568445 CACNB1Q02641 598 aaPredicted RBP18.02■□□□□ 0.48
CENPN-208ENST00000568445 RNF216Q9NWF9 866 aaPredicted RBP17.94■□□□□ 0.46
CENPN-208ENST00000568445 RNF39Q9H2S5 420 aa17.79■□□□□ 0.44
CENPN-208ENST00000568445 NCBP3Q53F19 620 aaKnown RBP17.62■□□□□ 0.41
CENPN-208ENST00000568445 C1QBPQ07021 282 aaKnown RBP17.49■□□□□ 0.39
CENPN-208ENST00000568445 DNAJC5BQ9UF47 199 aa17.44■□□□□ 0.38
CENPN-208ENST00000568445 NPM3O75607 178 aaKnown RBP17.41■□□□□ 0.38
CENPN-208ENST00000568445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.3■□□□□ 0.36
CENPN-208ENST00000568445 KCNA4P22459 653 aa16.97■□□□□ 0.31
CENPN-208ENST00000568445 U3KPZ7 1027 aaPredicted RBP16.92■□□□□ 0.3
CENPN-208ENST00000568445 SPINK5Q9NQ38 1064 aaPredicted RBP16.75■□□□□ 0.27
CENPN-208ENST00000568445 CAPN15O75808 1086 aa16.71■□□□□ 0.27
CENPN-208ENST00000568445 SLC4A2P04920 1241 aa16.68■□□□□ 0.26
CENPN-208ENST00000568445 DSG3P32926 999 aa16.62■□□□□ 0.25
CENPN-208ENST00000568445 NISCHQ9Y2I1 1504 aa16.56■□□□□ 0.24
CENPN-208ENST00000568445 TRHP20396 242 aaPredicted RBP16.42■□□□□ 0.22
CENPN-208ENST00000568445 APLP2Q06481 763 aa16.35■□□□□ 0.21
CENPN-208ENST00000568445 ABCB7O75027 752 aa16.34■□□□□ 0.21
CENPN-208ENST00000568445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
CENPN-208ENST00000568445 HNRNPUL2Q1KMD3 747 aaKnown RBP16.31■□□□□ 0.2
CENPN-208ENST00000568445 ZNF219Q9P2Y4 722 aaPredicted RBP16.31■□□□□ 0.2
CENPN-208ENST00000568445 SAMD1Q6SPF0 538 aaPredicted RBP16.24■□□□□ 0.19
CENPN-208ENST00000568445 POTEHQ6S545 545 aa16.14■□□□□ 0.17
CENPN-208ENST00000568445 MYCNP04198 464 aaPredicted RBP16.08■□□□□ 0.16
CENPN-208ENST00000568445 SLC4A1APQ9BWU0 796 aaKnown RBP15.97■□□□□ 0.15
CENPN-208ENST00000568445 POLA2Q14181 598 aa15.93■□□□□ 0.14
CENPN-208ENST00000568445 FOXD4L1Q9NU39 408 aa15.85■□□□□ 0.13
CENPN-208ENST00000568445 RBM42Q9BTD8 480 aaKnown RBP15.82■□□□□ 0.12
CENPN-208ENST00000568445 ATF5Q9Y2D1 282 aaPredicted RBP15.79■□□□□ 0.12
CENPN-208ENST00000568445 ABCC9O60706 1549 aa15.63■□□□□ 0.09
CENPN-208ENST00000568445 ZBTB22O15209 634 aa15.62■□□□□ 0.09
CENPN-208ENST00000568445 CHRDL2Q6WN34 429 aa15.57■□□□□ 0.08
CENPN-208ENST00000568445 ZBTB12Q9Y330 459 aaPredicted RBP15.52■□□□□ 0.08
CENPN-208ENST00000568445 OSCARQ8IYS5 282 aa15.44■□□□□ 0.06
CENPN-208ENST00000568445 AKT1S1Q96B36 256 aa15.44■□□□□ 0.06
CENPN-208ENST00000568445 REM2Q8IYK8 340 aaPredicted RBP15.33■□□□□ 0.04
CENPN-208ENST00000568445 ATXN8OSP0DMR3 200 aa15.32■□□□□ 0.04
CENPN-208ENST00000568445 PIP4P2Q8N4L2 257 aa15.19■□□□□ 0.02
CENPN-208ENST00000568445 PITPNM1O00562 1244 aa15.18■□□□□ 0.02
CENPN-208ENST00000568445 FBLN2P98095 1184 aa15.11■□□□□ 0.01
CENPN-208ENST00000568445 CCDC180Q9P1Z9 1646 aa15.06■□□□□ 0
CENPN-208ENST00000568445 SPDYE2BA6NHP3 402 aa15.05■□□□□ -0
CENPN-208ENST00000568445 SPDYE6P0CI01 402 aa15.05■□□□□ -0
CENPN-208ENST00000568445 FXR2P51116 673 aaKnown RBP eCLIP15.05■□□□□ -0
CENPN-208ENST00000568445 SPDYE2Q495Y8 402 aa15.05■□□□□ -0
CENPN-208ENST00000568445 SP7Q8TDD2 431 aaPredicted RBP15.05■□□□□ -0
CENPN-208ENST00000568445 MKRN4PQ13434 485 aaPredicted RBP15.03■□□□□ -0
CENPN-208ENST00000568445 HAX1O00165 279 aa14.96□□□□□ -0.01
CENPN-208ENST00000568445 ZNF692Q9BU19 519 aaPredicted RBP14.89□□□□□ -0.03
CENPN-208ENST00000568445 CLEC11AQ9Y240 323 aa14.88□□□□□ -0.03
CENPN-208ENST00000568445 SSUH2Q9Y2M2 353 aa14.85□□□□□ -0.03
CENPN-208ENST00000568445 SPDYE1Q8NFV5 336 aaPredicted RBP14.83□□□□□ -0.04
CENPN-208ENST00000568445 EVX2Q03828 476 aa14.8□□□□□ -0.04
CENPN-208ENST00000568445 PRKAR2AP13861 404 aaKnown RBP14.79□□□□□ -0.04
CENPN-208ENST00000568445 CSRNP3Q8WYN3 585 aa14.75□□□□□ -0.05
CENPN-208ENST00000568445 PABPN1Q86U42 306 aaKnown RBP eCLIP14.67□□□□□ -0.06
CENPN-208ENST00000568445 CHADLQ6NUI6 762 aa14.63□□□□□ -0.07
CENPN-208ENST00000568445 RB1CC1Q8TDY2 1594 aa14.59□□□□□ -0.07
CENPN-208ENST00000568445 C19orf67A6NJJ6 358 aa14.58□□□□□ -0.08
CENPN-208ENST00000568445 PRR29P0C7W0 189 aa14.58□□□□□ -0.08
CENPN-208ENST00000568445 EHMT2Q96KQ7 1210 aa14.52□□□□□ -0.09
CENPN-208ENST00000568445 GABBR2O75899 941 aa14.42□□□□□ -0.1
CENPN-208ENST00000568445 NACADO15069 1562 aa14.37□□□□□ -0.11
CENPN-208ENST00000568445 FARP1Q9Y4F1 1045 aaPredicted RBP14.35□□□□□ -0.11
CENPN-208ENST00000568445 DNAJC5Q9H3Z4 198 aa14.32□□□□□ -0.12
CENPN-208ENST00000568445 UNC13AQ9UPW8 1703 aa14.32□□□□□ -0.12
CENPN-208ENST00000568445 CD44P16070 742 aaKnown RBP14.31□□□□□ -0.12
CENPN-208ENST00000568445 BICRAQ9NZM4 1560 aa14.29□□□□□ -0.12
CENPN-208ENST00000568445 SPDYE4A6NLX3 237 aa14.23□□□□□ -0.13
CENPN-208ENST00000568445 CREBZFQ9NS37 354 aa14.19□□□□□ -0.14
CENPN-208ENST00000568445 STAG3Q9UJ98 1225 aa14.18□□□□□ -0.14
CENPN-208ENST00000568445 DCAF8L2P0C7V8 631 aa14.13□□□□□ -0.15
CENPN-208ENST00000568445 POTEIP0CG38 1075 aa14.13□□□□□ -0.15
CENPN-208ENST00000568445 LHX8Q68G74 356 aa14.13□□□□□ -0.15
CENPN-208ENST00000568445 CECR2Q9BXF3 1484 aa14.12□□□□□ -0.15
CENPN-208ENST00000568445 CC2D2AQ9P2K1 1620 aa14.09□□□□□ -0.15
CENPN-208ENST00000568445 ZRANB1Q9UGI0 708 aa14.09□□□□□ -0.15
CENPN-208ENST00000568445 ZNF579Q8NAF0 562 aaKnown RBP14.05□□□□□ -0.16
CENPN-208ENST00000568445 CLCN6P51797 869 aa14.03□□□□□ -0.16
CENPN-208ENST00000568445 MYO15BQ96JP2 1530 aa14.01□□□□□ -0.17
CENPN-208ENST00000568445 DCBLD2Q96PD2 775 aa13.99□□□□□ -0.17
CENPN-208ENST00000568445 SHROOM4Q9ULL8 1493 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms