RNA–Protein interactions for RNA: ENST00000568395.1

ERVK13-1-205, Transcript of endogenous retrovirus group K13 member 1, humanhuman

TSL 1 (best) BASIC

Gene ERVK13-1, Length 5,578 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVK13-1-205ENST00000568395 DCAF8L2P0C7V8 631 aa22.55■■□□□ 1.2
ERVK13-1-205ENST00000568395 NISCHQ9Y2I1 1504 aa22.17■■□□□ 1.14
ERVK13-1-205ENST00000568395 SHROOM4Q9ULL8 1493 aa21.37■■□□□ 1.01
ERVK13-1-205ENST00000568395 SUPT5HO00267 1087 aaKnown RBP21.31■■□□□ 1
ERVK13-1-205ENST00000568395 EHMT2Q96KQ7 1210 aa20.8■□□□□ 0.92
ERVK13-1-205ENST00000568395 FAM9AQ8IZU1 332 aaPredicted RBP20.13■□□□□ 0.81
ERVK13-1-205ENST00000568395 PELP1Q8IZL8 1130 aaKnown RBP20.04■□□□□ 0.8
ERVK13-1-205ENST00000568395 MYT1Q01538 1121 aa19.97■□□□□ 0.79
ERVK13-1-205ENST00000568395 TTBK1Q5TCY1 1321 aaPredicted RBP19.96■□□□□ 0.79
ERVK13-1-205ENST00000568395 RANGAP1P46060 587 aaPredicted RBP19.82■□□□□ 0.76
ERVK13-1-205ENST00000568395 TRIM41Q8WV44 630 aa19.53■□□□□ 0.72
ERVK13-1-205ENST00000568395 PCGF6Q9BYE7 350 aa19.52■□□□□ 0.71
ERVK13-1-205ENST00000568395 APLP2Q06481 763 aa19.42■□□□□ 0.7
ERVK13-1-205ENST00000568395 PPARGC1BQ86YN6 1023 aaKnown RBP19.38■□□□□ 0.69
ERVK13-1-205ENST00000568395 ABCC9O60706 1549 aa19.34■□□□□ 0.69
ERVK13-1-205ENST00000568395 ATP1B4Q9UN42 357 aaPredicted RBP19.32■□□□□ 0.68
ERVK13-1-205ENST00000568395 UBTFP17480 764 aaKnown RBP19.24■□□□□ 0.67
ERVK13-1-205ENST00000568395 PABPN1Q86U42 306 aaKnown RBP eCLIP19.22■□□□□ 0.67
ERVK13-1-205ENST00000568395 LOC105371045A0A1W2PR82 267 aa19.13■□□□□ 0.65
ERVK13-1-205ENST00000568395 CENPBP07199 599 aaPredicted RBP19.13■□□□□ 0.65
ERVK13-1-205ENST00000568395 ZEB1P37275 1124 aaPredicted RBP18.95■□□□□ 0.62
ERVK13-1-205ENST00000568395 CHIC1Q5VXU3 224 aa18.94■□□□□ 0.62
ERVK13-1-205ENST00000568395 CCER1Q8TC90 406 aaPredicted RBP18.93■□□□□ 0.62
ERVK13-1-205ENST00000568395 ERICH6Q7L0X2 663 aa18.9■□□□□ 0.62
ERVK13-1-205ENST00000568395 ITGAEP38570 1179 aa18.76■□□□□ 0.59
ERVK13-1-205ENST00000568395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.62■□□□□ 0.57
ERVK13-1-205ENST00000568395 HNRNPUL2Q1KMD3 747 aaKnown RBP18.62■□□□□ 0.57
ERVK13-1-205ENST00000568395 HRCP23327 699 aa18.59■□□□□ 0.57
ERVK13-1-205ENST00000568395 SCRIBQ14160 1630 aa18.56■□□□□ 0.56
ERVK13-1-205ENST00000568395 YTHDC1Q96MU7 727 aaKnown RBP18.55■□□□□ 0.56
ERVK13-1-205ENST00000568395 TRIM26Q12899 539 aaPredicted RBP18.52■□□□□ 0.56
ERVK13-1-205ENST00000568395 MYT1LQ9UL68 1186 aa18.39■□□□□ 0.54
ERVK13-1-205ENST00000568395 ZCCHC6Q5VYS8 1495 aaKnown RBP18.36■□□□□ 0.53
ERVK13-1-205ENST00000568395 CNGB1Q14028 1251 aaPredicted RBP18.34■□□□□ 0.53
ERVK13-1-205ENST00000568395 NEFLP07196 543 aa18.32■□□□□ 0.52
ERVK13-1-205ENST00000568395 POLR3GLQ9BT43 218 aa18.28■□□□□ 0.52
ERVK13-1-205ENST00000568395 FBLN2P98095 1184 aa18.27■□□□□ 0.52
ERVK13-1-205ENST00000568395 ARID3CA6NKF2 412 aa18.27■□□□□ 0.52
ERVK13-1-205ENST00000568395 P3H3Q8IVL6 736 aa18.24■□□□□ 0.51
ERVK13-1-205ENST00000568395 FAM50AQ14320 339 aaKnown RBP18.2■□□□□ 0.5
ERVK13-1-205ENST00000568395 CCDC180Q9P1Z9 1646 aa18.13■□□□□ 0.49
ERVK13-1-205ENST00000568395 NEUROD1Q13562 356 aa18.02■□□□□ 0.48
ERVK13-1-205ENST00000568395 TRIM52Q96A61 297 aa17.97■□□□□ 0.47
ERVK13-1-205ENST00000568395 CSRNP3Q8WYN3 585 aa17.96■□□□□ 0.47
ERVK13-1-205ENST00000568395 ZNF326Q5BKZ1 582 aaKnown RBP17.85■□□□□ 0.45
ERVK13-1-205ENST00000568395 SLC4A1APQ9BWU0 796 aaKnown RBP17.84■□□□□ 0.45
ERVK13-1-205ENST00000568395 MYO15BQ96JP2 1530 aa17.81■□□□□ 0.44
ERVK13-1-205ENST00000568395 GTF3C3Q9Y5Q9 886 aa17.8■□□□□ 0.44
ERVK13-1-205ENST00000568395 RB1CC1Q8TDY2 1594 aa17.8■□□□□ 0.44
ERVK13-1-205ENST00000568395 ZNF777Q9ULD5 760 aaPredicted RBP17.79■□□□□ 0.44
ERVK13-1-205ENST00000568395 RTL5Q5HYW3 569 aaPredicted RBP17.78■□□□□ 0.44
ERVK13-1-205ENST00000568395 DIEXFQ68CQ4 756 aaKnown RBP17.77■□□□□ 0.44
ERVK13-1-205ENST00000568395 RSF1Q96T23 1441 aaPredicted RBP17.77■□□□□ 0.44
ERVK13-1-205ENST00000568395 DAXXQ9UER7 740 aaPredicted RBP17.72■□□□□ 0.43
ERVK13-1-205ENST00000568395 CECR2Q9BXF3 1484 aa17.68■□□□□ 0.42
ERVK13-1-205ENST00000568395 ACIN1Q9UKV3 1341 aaKnown RBP17.64■□□□□ 0.41
ERVK13-1-205ENST00000568395 NACADO15069 1562 aa17.58■□□□□ 0.4
ERVK13-1-205ENST00000568395 CHIC2Q9UKJ5 165 aa17.57■□□□□ 0.4
ERVK13-1-205ENST00000568395 PLPPR3Q6T4P5 718 aa17.56■□□□□ 0.4
ERVK13-1-205ENST00000568395 BAZ1BQ9UIG0 1483 aaKnown RBP17.51■□□□□ 0.39
ERVK13-1-205ENST00000568395 DCAF1Q9Y4B6 1507 aa17.5■□□□□ 0.39
ERVK13-1-205ENST00000568395 BCANQ96GW7 911 aa17.5■□□□□ 0.39
ERVK13-1-205ENST00000568395 SENP3Q9H4L4 574 aaPredicted RBP17.46■□□□□ 0.39
ERVK13-1-205ENST00000568395 CHMP7Q8WUX9 453 aaPredicted RBP17.43■□□□□ 0.38
ERVK13-1-205ENST00000568395 ZNF316A6NFI3 1004 aaPredicted RBP17.4■□□□□ 0.38
ERVK13-1-205ENST00000568395 WRNQ14191 1432 aaPredicted RBP eCLIP17.39■□□□□ 0.37
ERVK13-1-205ENST00000568395 MROH2BQ7Z745 1585 aa17.38■□□□□ 0.37
ERVK13-1-205ENST00000568395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.38■□□□□ 0.37
ERVK13-1-205ENST00000568395 CLSPNQ9HAW4 1339 aa17.38■□□□□ 0.37
ERVK13-1-205ENST00000568395 HIRIP3Q9BW71 556 aaPredicted RBP17.37■□□□□ 0.37
ERVK13-1-205ENST00000568395 CLIP1P30622 1438 aa17.37■□□□□ 0.37
ERVK13-1-205ENST00000568395 CDK11AQ9UQ88 783 aaPredicted RBP17.34■□□□□ 0.37
ERVK13-1-205ENST00000568395 CHGAP10645 457 aaKnown RBP17.34■□□□□ 0.37
ERVK13-1-205ENST00000568395 ANP32CO43423 234 aa17.31■□□□□ 0.36
ERVK13-1-205ENST00000568395 CEP162Q5TB80 1403 aa17.31■□□□□ 0.36
ERVK13-1-205ENST00000568395 KCNH8Q96L42 1107 aa17.31■□□□□ 0.36
ERVK13-1-205ENST00000568395 ABCC8Q09428 1581 aa17.3■□□□□ 0.36
ERVK13-1-205ENST00000568395 BAZ1AQ9NRL2 1556 aaPredicted RBP17.3■□□□□ 0.36
ERVK13-1-205ENST00000568395 SOGA1O94964 1423 aa17.29■□□□□ 0.36
ERVK13-1-205ENST00000568395 GLIPR1L2Q4G1C9 344 aa17.29■□□□□ 0.36
ERVK13-1-205ENST00000568395 RRP7BPQ9NSQ0 103 aa17.29■□□□□ 0.36
ERVK13-1-205ENST00000568395 SCAF1Q9H7N4 1312 aaKnown RBP17.28■□□□□ 0.36
ERVK13-1-205ENST00000568395 BCL11AQ9H165 835 aa17.27■□□□□ 0.36
ERVK13-1-205ENST00000568395 MTUS2Q5JR59 1369 aa17.25■□□□□ 0.35
ERVK13-1-205ENST00000568395 WIZO95785 1651 aa17.23■□□□□ 0.35
ERVK13-1-205ENST00000568395 KDM2AQ9Y2K7 1162 aa17.22■□□□□ 0.35
ERVK13-1-205ENST00000568395 CCDC88BA6NC98 1476 aa17.22■□□□□ 0.35
ERVK13-1-205ENST00000568395 GOLGA3Q08378 1498 aa17.22■□□□□ 0.35
ERVK13-1-205ENST00000568395 DDX10Q13206 875 aaKnown RBP17.21■□□□□ 0.35
ERVK13-1-205ENST00000568395 EIF5BO60841 1220 aaKnown RBP17.2■□□□□ 0.34
ERVK13-1-205ENST00000568395 ERCC6Q03468 1493 aa17.2■□□□□ 0.34
ERVK13-1-205ENST00000568395 NPM1P06748 294 aaKnown RBP eCLIP17.19■□□□□ 0.34
ERVK13-1-205ENST00000568395 TONSLQ96HA7 1378 aa17.19■□□□□ 0.34
ERVK13-1-205ENST00000568395 SLC24A1O60721 1099 aa17.18■□□□□ 0.34
ERVK13-1-205ENST00000568395 SENP3-EIF4A1A0A087X0R7 540 aa17.15■□□□□ 0.34
ERVK13-1-205ENST00000568395 SALL2Q9Y467 1007 aaPredicted RBP17.14■□□□□ 0.33
ERVK13-1-205ENST00000568395 KIF27Q86VH2 1401 aa17.13■□□□□ 0.33
ERVK13-1-205ENST00000568395 STAG3Q9UJ98 1225 aa17.11■□□□□ 0.33
ERVK13-1-205ENST00000568395 CUX2O14529 1486 aa17.09■□□□□ 0.33
ERVK13-1-205ENST00000568395 EIF4G1Q04637 1599 aaKnown RBP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms