RNA–Protein interactions for RNA: ENST00000568346.1

KLHDC4-221, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 343 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-221ENST00000568346 NISCHQ9Y2I1 1504 aa18.71■□□□□ 0.59
KLHDC4-221ENST00000568346 DNAJC5BQ9UF47 199 aa17.06■□□□□ 0.32
KLHDC4-221ENST00000568346 ABCC9O60706 1549 aa16.76■□□□□ 0.27
KLHDC4-221ENST00000568346 DNAJC5Q9H3Z4 198 aa16.54■□□□□ 0.24
KLHDC4-221ENST00000568346 CCDC180Q9P1Z9 1646 aa16.32■□□□□ 0.2
KLHDC4-221ENST00000568346 ZCCHC6Q5VYS8 1495 aaKnown RBP15.84■□□□□ 0.13
KLHDC4-221ENST00000568346 DCAF1Q9Y4B6 1507 aa15.58■□□□□ 0.08
KLHDC4-221ENST00000568346 PABPN1Q86U42 306 aaKnown RBP eCLIP15.43■□□□□ 0.06
KLHDC4-221ENST00000568346 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
KLHDC4-221ENST00000568346 SHROOM4Q9ULL8 1493 aa15.3■□□□□ 0.04
KLHDC4-221ENST00000568346 MYO15BQ96JP2 1530 aa15.25■□□□□ 0.03
KLHDC4-221ENST00000568346 RB1CC1Q8TDY2 1594 aa15.19■□□□□ 0.02
KLHDC4-221ENST00000568346 CECR2Q9BXF3 1484 aa15.18■□□□□ 0.02
KLHDC4-221ENST00000568346 CC2D2AQ9P2K1 1620 aa15.03■□□□□ -0
KLHDC4-221ENST00000568346 UNC13AQ9UPW8 1703 aa15□□□□□ -0.01
KLHDC4-221ENST00000568346 NACADO15069 1562 aa14.98□□□□□ -0.01
KLHDC4-221ENST00000568346 DCAF8L2P0C7V8 631 aa14.96□□□□□ -0.01
KLHDC4-221ENST00000568346 BICRAQ9NZM4 1560 aa14.91□□□□□ -0.02
KLHDC4-221ENST00000568346 SCRIBQ14160 1630 aa14.88□□□□□ -0.03
KLHDC4-221ENST00000568346 SUPT5HO00267 1087 aaKnown RBP14.87□□□□□ -0.03
KLHDC4-221ENST00000568346 CUX2O14529 1486 aa14.87□□□□□ -0.03
KLHDC4-221ENST00000568346 AEBP2Q6ZN18 517 aaPredicted RBP14.73□□□□□ -0.05
KLHDC4-221ENST00000568346 EIF4G1Q04637 1599 aaKnown RBP14.61□□□□□ -0.07
KLHDC4-221ENST00000568346 RSF1Q96T23 1441 aaPredicted RBP14.59□□□□□ -0.07
KLHDC4-221ENST00000568346 CHIC1Q5VXU3 224 aa14.55□□□□□ -0.08
KLHDC4-221ENST00000568346 ILDR1Q86SU0 546 aaPredicted RBP14.5□□□□□ -0.09
KLHDC4-221ENST00000568346 ERCC6Q03468 1493 aa14.5□□□□□ -0.09
KLHDC4-221ENST00000568346 BAZ1AQ9NRL2 1556 aaPredicted RBP14.45□□□□□ -0.1
KLHDC4-221ENST00000568346 MROH2BQ7Z745 1585 aa14.44□□□□□ -0.1
KLHDC4-221ENST00000568346 WIZO95785 1651 aa14.4□□□□□ -0.1
KLHDC4-221ENST00000568346 SMARCA4P51532 1647 aa14.36□□□□□ -0.11
KLHDC4-221ENST00000568346 TOP2AP11388 1531 aaKnown RBP14.29□□□□□ -0.12
KLHDC4-221ENST00000568346 PEG3Q9GZU2 1588 aa14.22□□□□□ -0.13
KLHDC4-221ENST00000568346 SMARCA2P51531 1590 aa14.17□□□□□ -0.14
KLHDC4-221ENST00000568346 TRHP20396 242 aaPredicted RBP14.15□□□□□ -0.14
KLHDC4-221ENST00000568346 THOC2Q8NI27 1593 aaKnown RBP14.09□□□□□ -0.15
KLHDC4-221ENST00000568346 RIMBP3CA6NJZ7 1639 aa14.06□□□□□ -0.16
KLHDC4-221ENST00000568346 RIMBP3BA6NNM3 1639 aa14.06□□□□□ -0.16
KLHDC4-221ENST00000568346 RIMBP3Q9UFD9 1639 aa14.06□□□□□ -0.16
KLHDC4-221ENST00000568346 CCDC88BA6NC98 1476 aa14.04□□□□□ -0.16
KLHDC4-221ENST00000568346 NESP48681 1621 aa14.04□□□□□ -0.16
KLHDC4-221ENST00000568346 OSCARQ8IYS5 282 aa13.99□□□□□ -0.17
KLHDC4-221ENST00000568346 ATAD2BQ9ULI0 1458 aa13.93□□□□□ -0.18
KLHDC4-221ENST00000568346 LOC105371045A0A1W2PR82 267 aa13.91□□□□□ -0.18
KLHDC4-221ENST00000568346 ABCC8Q09428 1581 aa13.89□□□□□ -0.19
KLHDC4-221ENST00000568346 BAZ1BQ9UIG0 1483 aaKnown RBP13.87□□□□□ -0.19
KLHDC4-221ENST00000568346 HMGXB3Q12766 1538 aa13.86□□□□□ -0.19
KLHDC4-221ENST00000568346 CYB5RLQ6IPT4 315 aa13.86□□□□□ -0.19
KLHDC4-221ENST00000568346 ARHGEF11O15085 1522 aa13.84□□□□□ -0.19
KLHDC4-221ENST00000568346 EEA1Q15075 1411 aa13.82□□□□□ -0.2
KLHDC4-221ENST00000568346 PRDM2Q13029 1718 aa13.81□□□□□ -0.2
KLHDC4-221ENST00000568346 KIF21AQ7Z4S6 1674 aa13.77□□□□□ -0.21
KLHDC4-221ENST00000568346 NCAPD3P42695 1498 aa13.75□□□□□ -0.21
KLHDC4-221ENST00000568346 SYNJ1O43426 1573 aa13.75□□□□□ -0.21
KLHDC4-221ENST00000568346 HRCP23327 699 aa13.74□□□□□ -0.21
KLHDC4-221ENST00000568346 BIVM-ERCC5R4GMW8 1640 aa13.74□□□□□ -0.21
KLHDC4-221ENST00000568346 WRNQ14191 1432 aaPredicted RBP eCLIP13.73□□□□□ -0.21
KLHDC4-221ENST00000568346 PCGF6Q9BYE7 350 aa13.7□□□□□ -0.22
KLHDC4-221ENST00000568346 KIF21BO75037 1637 aa13.7□□□□□ -0.22
KLHDC4-221ENST00000568346 TOP2BQ02880 1626 aa13.69□□□□□ -0.22
KLHDC4-221ENST00000568346 TRIM26Q12899 539 aaPredicted RBP13.69□□□□□ -0.22
KLHDC4-221ENST00000568346 FAM9AQ8IZU1 332 aaPredicted RBP13.68□□□□□ -0.22
KLHDC4-221ENST00000568346 SOGA1O94964 1423 aa13.64□□□□□ -0.23
KLHDC4-221ENST00000568346 ARAP1Q96P48 1450 aa13.63□□□□□ -0.23
KLHDC4-221ENST00000568346 GOLGA3Q08378 1498 aa13.61□□□□□ -0.23
KLHDC4-221ENST00000568346 TNIKQ9UKE5 1360 aa13.61□□□□□ -0.23
KLHDC4-221ENST00000568346 LMTK3Q96Q04 1460 aa13.59□□□□□ -0.23
KLHDC4-221ENST00000568346 RUSC2Q8N2Y8 1516 aa13.58□□□□□ -0.24
KLHDC4-221ENST00000568346 CEP164Q9UPV0 1460 aa13.57□□□□□ -0.24
KLHDC4-221ENST00000568346 CEP162Q5TB80 1403 aa13.56□□□□□ -0.24
KLHDC4-221ENST00000568346 CFTRP13569 1480 aa13.55□□□□□ -0.24
KLHDC4-221ENST00000568346 SOCS7O14512 581 aa13.54□□□□□ -0.24
KLHDC4-221ENST00000568346 CSRNP3Q8WYN3 585 aa13.53□□□□□ -0.24
KLHDC4-221ENST00000568346 LAMC3Q9Y6N6 1575 aa13.53□□□□□ -0.24
KLHDC4-221ENST00000568346 ILDR2Q71H61 639 aa13.52□□□□□ -0.25
KLHDC4-221ENST00000568346 WDR62O43379 1518 aa13.52□□□□□ -0.25
KLHDC4-221ENST00000568346 ERICH3Q5RHP9 1530 aa13.51□□□□□ -0.25
KLHDC4-221ENST00000568346 MRC2Q9UBG0 1479 aa13.51□□□□□ -0.25
KLHDC4-221ENST00000568346 CUX1P39880 1505 aa13.49□□□□□ -0.25
KLHDC4-221ENST00000568346 PDS5BQ9NTI5 1447 aa13.48□□□□□ -0.25
KLHDC4-221ENST00000568346 KDM4FA0A1W2PPD8 638 aa13.47□□□□□ -0.25
KLHDC4-221ENST00000568346 FBXO41Q8TF61 875 aa13.45□□□□□ -0.26
KLHDC4-221ENST00000568346 ZEB1P37275 1124 aaPredicted RBP13.4□□□□□ -0.26
KLHDC4-221ENST00000568346 PRXQ9BXM0 1461 aa13.4□□□□□ -0.26
KLHDC4-221ENST00000568346 EHMT2Q96KQ7 1210 aa13.39□□□□□ -0.27
KLHDC4-221ENST00000568346 RAPGEF2Q9Y4G8 1499 aa13.39□□□□□ -0.27
KLHDC4-221ENST00000568346 CADPSQ9ULU8 1353 aa13.36□□□□□ -0.27
KLHDC4-221ENST00000568346 CLIP1P30622 1438 aa13.35□□□□□ -0.27
KLHDC4-221ENST00000568346 KIF27Q86VH2 1401 aa13.34□□□□□ -0.27
KLHDC4-221ENST00000568346 VPS8Q8N3P4 1428 aa13.34□□□□□ -0.27
KLHDC4-221ENST00000568346 ERCC6L2Q5T890 1561 aa13.32□□□□□ -0.28
KLHDC4-221ENST00000568346 UBTFP17480 764 aaKnown RBP13.32□□□□□ -0.28
KLHDC4-221ENST00000568346 DNMBPQ6XZF7 1577 aa13.31□□□□□ -0.28
KLHDC4-221ENST00000568346 HECW2Q9P2P5 1572 aa13.28□□□□□ -0.28
KLHDC4-221ENST00000568346 WDR97A6NE52 1622 aa13.28□□□□□ -0.28
KLHDC4-221ENST00000568346 FGD5Q6ZNL6 1462 aa13.26□□□□□ -0.29
KLHDC4-221ENST00000568346 FANCD2Q9BXW9 1451 aa13.25□□□□□ -0.29
KLHDC4-221ENST00000568346 PPARGC1BQ86YN6 1023 aaKnown RBP13.25□□□□□ -0.29
KLHDC4-221ENST00000568346 DISP3Q9P2K9 1392 aa13.24□□□□□ -0.29
KLHDC4-221ENST00000568346 CUL7Q14999 1698 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms