RNA–Protein interactions for RNA: ENST00000567697.1

PMM2-214, Transcript of phosphomannomutase 2, humanhuman

TSL 1 (best)

Gene PMM2, Length 5,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM2-214ENST00000567697 NISCHQ9Y2I1 1504 aa20.77■□□□□ 0.91
PMM2-214ENST00000567697 SUPT5HO00267 1087 aaKnown RBP19.75■□□□□ 0.75
PMM2-214ENST00000567697 PELP1Q8IZL8 1130 aaKnown RBP19.67■□□□□ 0.74
PMM2-214ENST00000567697 DCAF8L2P0C7V8 631 aa19.48■□□□□ 0.71
PMM2-214ENST00000567697 SHROOM4Q9ULL8 1493 aa19.46■□□□□ 0.71
PMM2-214ENST00000567697 MYT1Q01538 1121 aa19.35■□□□□ 0.69
PMM2-214ENST00000567697 PCGF6Q9BYE7 350 aa19.34■□□□□ 0.69
PMM2-214ENST00000567697 HRCP23327 699 aa19.22■□□□□ 0.67
PMM2-214ENST00000567697 ZEB1P37275 1124 aaPredicted RBP19.18■□□□□ 0.66
PMM2-214ENST00000567697 CENPBP07199 599 aaPredicted RBP18.95■□□□□ 0.62
PMM2-214ENST00000567697 TRIM26Q12899 539 aaPredicted RBP18.71■□□□□ 0.59
PMM2-214ENST00000567697 EHMT2Q96KQ7 1210 aa18.62■□□□□ 0.57
PMM2-214ENST00000567697 PPARGC1BQ86YN6 1023 aaKnown RBP18.6■□□□□ 0.57
PMM2-214ENST00000567697 CCER1Q8TC90 406 aaPredicted RBP18.54■□□□□ 0.56
PMM2-214ENST00000567697 CHIC1Q5VXU3 224 aa18.47■□□□□ 0.55
PMM2-214ENST00000567697 FAM9AQ8IZU1 332 aaPredicted RBP18.44■□□□□ 0.54
PMM2-214ENST00000567697 TRIM41Q8WV44 630 aa18.37■□□□□ 0.53
PMM2-214ENST00000567697 APLP2Q06481 763 aa18.28■□□□□ 0.52
PMM2-214ENST00000567697 YTHDC1Q96MU7 727 aaKnown RBP18.27■□□□□ 0.51
PMM2-214ENST00000567697 ERICH6Q7L0X2 663 aa18.24■□□□□ 0.51
PMM2-214ENST00000567697 LOC105371045A0A1W2PR82 267 aa18.2■□□□□ 0.5
PMM2-214ENST00000567697 TTBK1Q5TCY1 1321 aaPredicted RBP18.19■□□□□ 0.5
PMM2-214ENST00000567697 DCAF1Q9Y4B6 1507 aa18.06■□□□□ 0.48
PMM2-214ENST00000567697 DIEXFQ68CQ4 756 aaKnown RBP18.05■□□□□ 0.48
PMM2-214ENST00000567697 GTF3C3Q9Y5Q9 886 aa18.03■□□□□ 0.48
PMM2-214ENST00000567697 ACIN1Q9UKV3 1341 aaKnown RBP18.01■□□□□ 0.47
PMM2-214ENST00000567697 NEFLP07196 543 aa18.01■□□□□ 0.47
PMM2-214ENST00000567697 SCAF1Q9H7N4 1312 aaKnown RBP17.85■□□□□ 0.45
PMM2-214ENST00000567697 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.85■□□□□ 0.45
PMM2-214ENST00000567697 UBTFP17480 764 aaKnown RBP17.8■□□□□ 0.44
PMM2-214ENST00000567697 CCDC180Q9P1Z9 1646 aa17.71■□□□□ 0.43
PMM2-214ENST00000567697 MYO15BQ96JP2 1530 aa17.69■□□□□ 0.42
PMM2-214ENST00000567697 ZNF316A6NFI3 1004 aaPredicted RBP17.65■□□□□ 0.42
PMM2-214ENST00000567697 NEUROD1Q13562 356 aa17.6■□□□□ 0.41
PMM2-214ENST00000567697 CLSPNQ9HAW4 1339 aa17.6■□□□□ 0.41
PMM2-214ENST00000567697 RANGAP1P46060 587 aaPredicted RBP17.57■□□□□ 0.4
PMM2-214ENST00000567697 HNRNPUL2Q1KMD3 747 aaKnown RBP17.53■□□□□ 0.4
PMM2-214ENST00000567697 ZCCHC6Q5VYS8 1495 aaKnown RBP17.48■□□□□ 0.39
PMM2-214ENST00000567697 BCANQ96GW7 911 aa17.31■□□□□ 0.36
PMM2-214ENST00000567697 RTL5Q5HYW3 569 aaPredicted RBP17.31■□□□□ 0.36
PMM2-214ENST00000567697 CDK11AQ9UQ88 783 aaPredicted RBP17.25■□□□□ 0.35
PMM2-214ENST00000567697 ATP1B4Q9UN42 357 aaPredicted RBP17.21■□□□□ 0.35
PMM2-214ENST00000567697 ITGAEP38570 1179 aa17.18■□□□□ 0.34
PMM2-214ENST00000567697 DAXXQ9UER7 740 aaPredicted RBP17.17■□□□□ 0.34
PMM2-214ENST00000567697 MYT1LQ9UL68 1186 aa17.17■□□□□ 0.34
PMM2-214ENST00000567697 ANP32EQ9BTT0 268 aa17.15■□□□□ 0.34
PMM2-214ENST00000567697 ANP32CO43423 234 aa17.12■□□□□ 0.33
PMM2-214ENST00000567697 MIER1Q8N108 512 aa17.1■□□□□ 0.33
PMM2-214ENST00000567697 FKBP8Q14318 412 aa17.06■□□□□ 0.32
PMM2-214ENST00000567697 CSRNP3Q8WYN3 585 aa16.94■□□□□ 0.3
PMM2-214ENST00000567697 ANP32AP39687 249 aaKnown RBP16.91■□□□□ 0.3
PMM2-214ENST00000567697 BCL11AQ9H165 835 aa16.91■□□□□ 0.3
PMM2-214ENST00000567697 SUPT16HQ9Y5B9 1047 aaKnown RBP16.87■□□□□ 0.29
PMM2-214ENST00000567697 FAM50AQ14320 339 aaKnown RBP16.86■□□□□ 0.29
PMM2-214ENST00000567697 SCRIBQ14160 1630 aa16.84■□□□□ 0.29
PMM2-214ENST00000567697 POLR3GLQ9BT43 218 aa16.82■□□□□ 0.28
PMM2-214ENST00000567697 CEP162Q5TB80 1403 aa16.78■□□□□ 0.28
PMM2-214ENST00000567697 RSF1Q96T23 1441 aaPredicted RBP16.75■□□□□ 0.27
PMM2-214ENST00000567697 RB1CC1Q8TDY2 1594 aa16.72■□□□□ 0.27
PMM2-214ENST00000567697 DDX10Q13206 875 aaKnown RBP16.71■□□□□ 0.27
PMM2-214ENST00000567697 EEA1Q15075 1411 aa16.71■□□□□ 0.27
PMM2-214ENST00000567697 GOLGA3Q08378 1498 aa16.68■□□□□ 0.26
PMM2-214ENST00000567697 HNRNPUQ00839 825 aaKnown RBP eCLIP16.67■□□□□ 0.26
PMM2-214ENST00000567697 TNIKQ9UKE5 1360 aa16.67■□□□□ 0.26
PMM2-214ENST00000567697 CNGB1Q14028 1251 aaPredicted RBP16.67■□□□□ 0.26
PMM2-214ENST00000567697 NBR1Q14596 966 aa16.66■□□□□ 0.26
PMM2-214ENST00000567697 TRIM52Q96A61 297 aa16.63■□□□□ 0.25
PMM2-214ENST00000567697 ZBTB47Q9UFB7 747 aaPredicted RBP16.63■□□□□ 0.25
PMM2-214ENST00000567697 CLIP1P30622 1438 aa16.62■□□□□ 0.25
PMM2-214ENST00000567697 TSHZ2Q9NRE2 1034 aa16.61■□□□□ 0.25
PMM2-214ENST00000567697 ABCC9O60706 1549 aa16.6■□□□□ 0.25
PMM2-214ENST00000567697 TONSLQ96HA7 1378 aa16.6■□□□□ 0.25
PMM2-214ENST00000567697 NPM2Q86SE8 214 aaKnown RBP16.59■□□□□ 0.25
PMM2-214ENST00000567697 EIF5BO60841 1220 aaKnown RBP16.58■□□□□ 0.24
PMM2-214ENST00000567697 GLIPR1L2Q4G1C9 344 aa16.56■□□□□ 0.24
PMM2-214ENST00000567697 RBM19Q9Y4C8 960 aaKnown RBP16.54■□□□□ 0.24
PMM2-214ENST00000567697 CCDC136Q96JN2 1154 aa16.49■□□□□ 0.23
PMM2-214ENST00000567697 IRX6P78412 446 aaPredicted RBP16.49■□□□□ 0.23
PMM2-214ENST00000567697 CEP164Q9UPV0 1460 aa16.46■□□□□ 0.23
PMM2-214ENST00000567697 NOP58Q9Y2X3 529 aaKnown RBP16.46■□□□□ 0.22
PMM2-214ENST00000567697 FAM9BQ8IZU0 186 aa16.45■□□□□ 0.22
PMM2-214ENST00000567697 PPP4R2Q9NY27 417 aa16.44■□□□□ 0.22
PMM2-214ENST00000567697 DEKP35659 375 aaKnown RBP16.44■□□□□ 0.22
PMM2-214ENST00000567697 WRNQ14191 1432 aaPredicted RBP eCLIP16.4■□□□□ 0.22
PMM2-214ENST00000567697 CCER2I3L3R5 266 aa16.4■□□□□ 0.22
PMM2-214ENST00000567697 DDRGK1Q96HY6 314 aa16.39■□□□□ 0.21
PMM2-214ENST00000567697 MRS2Q9HD23 443 aa16.36■□□□□ 0.21
PMM2-214ENST00000567697 ZNF326Q5BKZ1 582 aaKnown RBP16.33■□□□□ 0.21
PMM2-214ENST00000567697 ERICH6BQ5W0A0 696 aa16.33■□□□□ 0.2
PMM2-214ENST00000567697 PPM1GO15355 546 aaPredicted RBP16.33■□□□□ 0.2
PMM2-214ENST00000567697 HIRIP3Q9BW71 556 aaPredicted RBP16.3■□□□□ 0.2
PMM2-214ENST00000567697 VPS8Q8N3P4 1428 aa16.28■□□□□ 0.2
PMM2-214ENST00000567697 PABPN1Q86U42 306 aaKnown RBP eCLIP16.25■□□□□ 0.19
PMM2-214ENST00000567697 CANXP27824 592 aaKnown RBP16.25■□□□□ 0.19
PMM2-214ENST00000567697 TIMELESSQ9UNS1 1208 aa16.25■□□□□ 0.19
PMM2-214ENST00000567697 EIF4G2P78344 907 aaKnown RBP eCLIP16.24■□□□□ 0.19
PMM2-214ENST00000567697 SOGA1O94964 1423 aa16.24■□□□□ 0.19
PMM2-214ENST00000567697 P3H3Q8IVL6 736 aa16.24■□□□□ 0.19
PMM2-214ENST00000567697 NEFMP07197 916 aa16.23■□□□□ 0.19
PMM2-214ENST00000567697 TMC1Q8TDI8 760 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms