RNA–Protein interactions for RNA: ENST00000566605.5

FUS-209, Transcript of FUS RNA binding protein, humanhuman

TSL 1 (best)

Gene FUS, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUS-209ENST00000566605 NISCHQ9Y2I1 1504 aa57.56■■■■■ 6.8
FUS-209ENST00000566605 CCDC180Q9P1Z9 1646 aa50.04■■■■■ 5.6
FUS-209ENST00000566605 ZCCHC6Q5VYS8 1495 aaKnown RBP48.49■■■■■ 5.35
FUS-209ENST00000566605 DCAF1Q9Y4B6 1507 aa47.65■■■■■ 5.22
FUS-209ENST00000566605 SHROOM4Q9ULL8 1493 aa47.2■■■■■ 5.15
FUS-209ENST00000566605 DCAF8L2P0C7V8 631 aa47.19■■■■■ 5.15
FUS-209ENST00000566605 MYO15BQ96JP2 1530 aa46.9■■■■■ 5.1
FUS-209ENST00000566605 ABCC9O60706 1549 aa46.7■■■■■ 5.07
FUS-209ENST00000566605 NACADO15069 1562 aa46.44■■■■■ 5.02
FUS-209ENST00000566605 SCRIBQ14160 1630 aa46.01■■■■■ 4.96
FUS-209ENST00000566605 RB1CC1Q8TDY2 1594 aa45.91■■■■■ 4.94
FUS-209ENST00000566605 SUPT5HO00267 1087 aaKnown RBP45.66■■■■■ 4.9
FUS-209ENST00000566605 UNC13AQ9UPW8 1703 aa45.03■■■■■ 4.8
FUS-209ENST00000566605 RSF1Q96T23 1441 aaPredicted RBP44.82■■■■■ 4.76
FUS-209ENST00000566605 CECR2Q9BXF3 1484 aa44.62■■■■■ 4.73
FUS-209ENST00000566605 BICRAQ9NZM4 1560 aa44.49■■■■■ 4.71
FUS-209ENST00000566605 MROH2BQ7Z745 1585 aa44.46■■■■■ 4.71
FUS-209ENST00000566605 BAZ1AQ9NRL2 1556 aaPredicted RBP44.43■■■■■ 4.7
FUS-209ENST00000566605 SMARCA4P51532 1647 aa44.17■■■■■ 4.66
FUS-209ENST00000566605 WIZO95785 1651 aa44.15■■■■■ 4.66
FUS-209ENST00000566605 PABPN1Q86U42 306 aaKnown RBP eCLIP44.08■■■■■ 4.655e-12■■■■□ 24.4
FUS-209ENST00000566605 CHIC1Q5VXU3 224 aa44.03■■■■■ 4.64
FUS-209ENST00000566605 TOP2AP11388 1531 aaKnown RBP43.75■■■■■ 4.59
FUS-209ENST00000566605 PEG3Q9GZU2 1588 aa43.63■■■■■ 4.57
FUS-209ENST00000566605 SMARCA2P51531 1590 aa43.34■■■■■ 4.53
FUS-209ENST00000566605 ATAD2BQ9ULI0 1458 aa43.27■■■■■ 4.52
FUS-209ENST00000566605 CCDC88BA6NC98 1476 aa43.24■■■■■ 4.51
FUS-209ENST00000566605 EIF4G1Q04637 1599 aaKnown RBP43.24■■■■■ 4.51
FUS-209ENST00000566605 BAZ1BQ9UIG0 1483 aaKnown RBP43.07■■■■■ 4.48
FUS-209ENST00000566605 TRIM41Q8WV44 630 aa42.93■■■■■ 4.46
FUS-209ENST00000566605 HMGXB3Q12766 1538 aa42.86■■■■■ 4.45
FUS-209ENST00000566605 NCAPD3P42695 1498 aa42.81■■■■■ 4.44
FUS-209ENST00000566605 ABCC8Q09428 1581 aa42.5■■■■■ 4.39
FUS-209ENST00000566605 CC2D2AQ9P2K1 1620 aa42.33■■■■■ 4.37
FUS-209ENST00000566605 LOC105371045A0A1W2PR82 267 aa42.29■■■■■ 4.36
FUS-209ENST00000566605 WRNQ14191 1432 aaPredicted RBP eCLIP42.19■■■■■ 4.347e-6■□□□□ 9.3
FUS-209ENST00000566605 FAM9AQ8IZU1 332 aaPredicted RBP42.1■■■■■ 4.33
FUS-209ENST00000566605 SYNJ1O43426 1573 aa42.01■■■■■ 4.32
FUS-209ENST00000566605 CFTRP13569 1480 aa42.01■■■■■ 4.32
FUS-209ENST00000566605 PRDM2Q13029 1718 aa41.95■■■■■ 4.31
FUS-209ENST00000566605 EEA1Q15075 1411 aa41.92■■■■■ 4.3
FUS-209ENST00000566605 TOP2BQ02880 1626 aa41.84■■■■■ 4.29
FUS-209ENST00000566605 BIVM-ERCC5R4GMW8 1640 aa41.81■■■■■ 4.28
FUS-209ENST00000566605 SOGA1O94964 1423 aa41.78■■■■■ 4.28
FUS-209ENST00000566605 CADPSQ9ULU8 1353 aa41.73■■■■■ 4.27
FUS-209ENST00000566605 RUSC2Q8N2Y8 1516 aa41.58■■■■■ 4.25
FUS-209ENST00000566605 CUX1P39880 1505 aa41.56■■■■■ 4.24
FUS-209ENST00000566605 CSRNP3Q8WYN3 585 aa41.53■■■■■ 4.24
FUS-209ENST00000566605 EHMT2Q96KQ7 1210 aa41.44■■■■■ 4.22
FUS-209ENST00000566605 KIF21BO75037 1637 aa41.37■■■■■ 4.21
FUS-209ENST00000566605 GOLGA3Q08378 1498 aa41.34■■■■■ 4.21
FUS-209ENST00000566605 LAMC3Q9Y6N6 1575 aa41.31■■■■■ 4.2
FUS-209ENST00000566605 CEP164Q9UPV0 1460 aa41.3■■■■■ 4.2
FUS-209ENST00000566605 FANCD2Q9BXW9 1451 aa41.29■■■■■ 4.2
FUS-209ENST00000566605 TNIKQ9UKE5 1360 aa41.28■■■■■ 4.2
FUS-209ENST00000566605 NESP48681 1621 aa41.17■■■■■ 4.18
FUS-209ENST00000566605 CEP162Q5TB80 1403 aa41.09■■■■■ 4.17
FUS-209ENST00000566605 KIF27Q86VH2 1401 aa41.09■■■■■ 4.17
FUS-209ENST00000566605 DNMBPQ6XZF7 1577 aa41.07■■■■■ 4.17
FUS-209ENST00000566605 FGD5Q6ZNL6 1462 aa41.02■■■■■ 4.16
FUS-209ENST00000566605 UBTFP17480 764 aaKnown RBP41.02■■■■■ 4.16
FUS-209ENST00000566605 ERICH3Q5RHP9 1530 aa40.99■■■■■ 4.15
FUS-209ENST00000566605 PRXQ9BXM0 1461 aa40.94■■■■■ 4.14
FUS-209ENST00000566605 RAPGEF2Q9Y4G8 1499 aa40.94■■■■■ 4.14
FUS-209ENST00000566605 PCGF6Q9BYE7 350 aa40.94■■■■■ 4.14
FUS-209ENST00000566605 PDS5BQ9NTI5 1447 aa40.93■■■■■ 4.14
FUS-209ENST00000566605 DNAJC5BQ9UF47 199 aa40.92■■■■■ 4.14
FUS-209ENST00000566605 TOPBP1Q92547 1522 aa40.92■■■■■ 4.14
FUS-209ENST00000566605 TRIM26Q12899 539 aaPredicted RBP40.88■■■■■ 4.13
FUS-209ENST00000566605 CUX2O14529 1486 aa40.84■■■■■ 4.13
FUS-209ENST00000566605 KIF21AQ7Z4S6 1674 aa40.76■■■■■ 4.12
FUS-209ENST00000566605 POLA1P09884 1462 aaPredicted RBP40.74■■■■■ 4.11
FUS-209ENST00000566605 URB2Q14146 1524 aaKnown RBP40.74■■■■■ 4.11
FUS-209ENST00000566605 ABCA10Q8WWZ4 1543 aa40.69■■■■■ 4.1
FUS-209ENST00000566605 CLIP1P30622 1438 aa40.66■■■■■ 4.1
FUS-209ENST00000566605 IGF1RP08069 1367 aa40.61■■■■■ 4.09
FUS-209ENST00000566605 RAD54L2Q9Y4B4 1467 aa40.58■■■■■ 4.09
FUS-209ENST00000566605 WDR97A6NE52 1622 aa40.57■■■■■ 4.09
FUS-209ENST00000566605 CARMIL1Q5VZK9 1371 aa40.44■■■■■ 4.06
FUS-209ENST00000566605 VPS8Q8N3P4 1428 aa40.41■■■■■ 4.06
FUS-209ENST00000566605 MRC2Q9UBG0 1479 aa40.4■■■■■ 4.06
FUS-209ENST00000566605 CUL7Q14999 1698 aa40.38■■■■■ 4.06
FUS-209ENST00000566605 ABCA5Q8WWZ7 1642 aa40.35■■■■■ 4.05
FUS-209ENST00000566605 TARBP1Q13395 1621 aaKnown RBP40.28■■■■■ 4.04
FUS-209ENST00000566605 HRCP23327 699 aa40.25■■■■■ 4.03
FUS-209ENST00000566605 PPARGC1BQ86YN6 1023 aaKnown RBP40.23■■■■■ 4.03
FUS-209ENST00000566605 ARAP1Q96P48 1450 aa40.21■■■■■ 4.03
FUS-209ENST00000566605 WDR62O43379 1518 aa40.19■■■■■ 4.02
FUS-209ENST00000566605 GAPVD1Q14C86 1478 aa40.18■■■■■ 4.02
FUS-209ENST00000566605 RANGAP1P46060 587 aaPredicted RBP40.12■■■■■ 4.01
FUS-209ENST00000566605 TDRD9Q8NDG6 1382 aaKnown RBP40.1■■■■■ 4.01
FUS-209ENST00000566605 ARHGAP35Q9NRY4 1499 aa40.1■■■■■ 4.01
FUS-209ENST00000566605 CTTNBP2Q8WZ74 1663 aa40.02■■■■■ 4
FUS-209ENST00000566605 ERCC6Q03468 1493 aa40.02■■■■■ 4
FUS-209ENST00000566605 PBRM1Q86U86 1689 aa40■■■■□ 3.99
FUS-209ENST00000566605 IFT140Q96RY7 1462 aa39.99■■■■□ 3.99
FUS-209ENST00000566605 THOC2Q8NI27 1593 aaKnown RBP39.95■■■■□ 3.99
FUS-209ENST00000566605 APLP2Q06481 763 aa39.95■■■■□ 3.99
FUS-209ENST00000566605 EFCAB5A4FU69 1503 aa39.86■■■■□ 3.97
FUS-209ENST00000566605 TTBK1Q5TCY1 1321 aaPredicted RBP39.83■■■■□ 3.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms