RNA–Protein interactions for RNA: ENST00000565243.2

RNPS1-213, Transcript of RNA binding protein with serine rich domain 1, humanhuman

TSL 2

Gene RNPS1, Length 3,337 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPS1-213ENST00000565243 NISCHQ9Y2I1 1504 aa24.43■■□□□ 1.5
RNPS1-213ENST00000565243 SHROOM4Q9ULL8 1493 aa21.15■□□□□ 0.98
RNPS1-213ENST00000565243 SUPT5HO00267 1087 aaKnown RBP20.78■□□□□ 0.92
RNPS1-213ENST00000565243 ZCCHC6Q5VYS8 1495 aaKnown RBP20.75■□□□□ 0.91
RNPS1-213ENST00000565243 MYO15BQ96JP2 1530 aa20.64■□□□□ 0.89
RNPS1-213ENST00000565243 CCDC180Q9P1Z9 1646 aa20.59■□□□□ 0.89
RNPS1-213ENST00000565243 CHIC1Q5VXU3 224 aa20.38■□□□□ 0.85
RNPS1-213ENST00000565243 HRCP23327 699 aa20.28■□□□□ 0.84
RNPS1-213ENST00000565243 PCGF6Q9BYE7 350 aa20.07■□□□□ 0.8
RNPS1-213ENST00000565243 DCAF8L2P0C7V8 631 aa20.06■□□□□ 0.8
RNPS1-213ENST00000565243 PPARGC1BQ86YN6 1023 aaKnown RBP20■□□□□ 0.79
RNPS1-213ENST00000565243 DCAF1Q9Y4B6 1507 aa19.95■□□□□ 0.78
RNPS1-213ENST00000565243 LOC105371045A0A1W2PR82 267 aa19.88■□□□□ 0.77
RNPS1-213ENST00000565243 ABCC9O60706 1549 aa19.68■□□□□ 0.74
RNPS1-213ENST00000565243 TRIM26Q12899 539 aaPredicted RBP19.5■□□□□ 0.71
RNPS1-213ENST00000565243 RSF1Q96T23 1441 aaPredicted RBP19.48■□□□□ 0.71
RNPS1-213ENST00000565243 SCRIBQ14160 1630 aa19.48■□□□□ 0.71
RNPS1-213ENST00000565243 RB1CC1Q8TDY2 1594 aa19.45■□□□□ 0.7
RNPS1-213ENST00000565243 TRIM41Q8WV44 630 aa19.22■□□□□ 0.67
RNPS1-213ENST00000565243 FAM9AQ8IZU1 332 aaPredicted RBP19.22■□□□□ 0.67
RNPS1-213ENST00000565243 CECR2Q9BXF3 1484 aa19.15■□□□□ 0.66
RNPS1-213ENST00000565243 EHMT2Q96KQ7 1210 aa19.13■□□□□ 0.65
RNPS1-213ENST00000565243 MROH2BQ7Z745 1585 aa19.1■□□□□ 0.65
RNPS1-213ENST00000565243 WIZO95785 1651 aa19.07■□□□□ 0.64
RNPS1-213ENST00000565243 ZEB1P37275 1124 aaPredicted RBP19.05■□□□□ 0.64
RNPS1-213ENST00000565243 SCAF1Q9H7N4 1312 aaKnown RBP19■□□□□ 0.63
RNPS1-213ENST00000565243 EIF4G1Q04637 1599 aaKnown RBP19■□□□□ 0.63
RNPS1-213ENST00000565243 NACADO15069 1562 aa18.89■□□□□ 0.61
RNPS1-213ENST00000565243 BAZ1AQ9NRL2 1556 aaPredicted RBP18.88■□□□□ 0.61
RNPS1-213ENST00000565243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.8■□□□□ 0.6
RNPS1-213ENST00000565243 ABCC8Q09428 1581 aa18.76■□□□□ 0.59
RNPS1-213ENST00000565243 CCDC88BA6NC98 1476 aa18.7■□□□□ 0.58
RNPS1-213ENST00000565243 TOP2AP11388 1531 aaKnown RBP18.63■□□□□ 0.57
RNPS1-213ENST00000565243 NEUROD1Q13562 356 aa18.62■□□□□ 0.57
RNPS1-213ENST00000565243 SMARCA2P51531 1590 aa18.62■□□□□ 0.57
RNPS1-213ENST00000565243 CCER1Q8TC90 406 aaPredicted RBP18.61■□□□□ 0.57
RNPS1-213ENST00000565243 WRNQ14191 1432 aaPredicted RBP eCLIP18.6■□□□□ 0.57
RNPS1-213ENST00000565243 UNC13AQ9UPW8 1703 aa18.59■□□□□ 0.57
RNPS1-213ENST00000565243 TTBK1Q5TCY1 1321 aaPredicted RBP18.59■□□□□ 0.57
RNPS1-213ENST00000565243 SOGA1O94964 1423 aa18.58■□□□□ 0.57
RNPS1-213ENST00000565243 SMARCA4P51532 1647 aa18.58■□□□□ 0.57
RNPS1-213ENST00000565243 PELP1Q8IZL8 1130 aaKnown RBP18.57■□□□□ 0.56
RNPS1-213ENST00000565243 ACIN1Q9UKV3 1341 aaKnown RBP18.57■□□□□ 0.56
RNPS1-213ENST00000565243 CEP162Q5TB80 1403 aa18.56■□□□□ 0.56
RNPS1-213ENST00000565243 RUSC2Q8N2Y8 1516 aa18.56■□□□□ 0.56
RNPS1-213ENST00000565243 DIEXFQ68CQ4 756 aaKnown RBP18.47■□□□□ 0.55
RNPS1-213ENST00000565243 TNIKQ9UKE5 1360 aa18.44■□□□□ 0.54
RNPS1-213ENST00000565243 GTF3C3Q9Y5Q9 886 aa18.39■□□□□ 0.54
RNPS1-213ENST00000565243 CSRNP3Q8WYN3 585 aa18.31■□□□□ 0.52
RNPS1-213ENST00000565243 GOLGA3Q08378 1498 aa18.29■□□□□ 0.52
RNPS1-213ENST00000565243 SYNJ1O43426 1573 aa18.29■□□□□ 0.52
RNPS1-213ENST00000565243 EEA1Q15075 1411 aa18.28■□□□□ 0.52
RNPS1-213ENST00000565243 UBTFP17480 764 aaKnown RBP18.25■□□□□ 0.51
RNPS1-213ENST00000565243 ZNF316A6NFI3 1004 aaPredicted RBP18.23■□□□□ 0.51
RNPS1-213ENST00000565243 BICRAQ9NZM4 1560 aa18.23■□□□□ 0.51
RNPS1-213ENST00000565243 CENPBP07199 599 aaPredicted RBP18.21■□□□□ 0.51
RNPS1-213ENST00000565243 KIF21BO75037 1637 aa18.21■□□□□ 0.5
RNPS1-213ENST00000565243 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
RNPS1-213ENST00000565243 MIER1Q8N108 512 aa18.13■□□□□ 0.49
RNPS1-213ENST00000565243 HNRNPUL2Q1KMD3 747 aaKnown RBP18.13■□□□□ 0.49
RNPS1-213ENST00000565243 CEP164Q9UPV0 1460 aa18.13■□□□□ 0.49
RNPS1-213ENST00000565243 YTHDC1Q96MU7 727 aaKnown RBP18.13■□□□□ 0.49
RNPS1-213ENST00000565243 CLIP1P30622 1438 aa18.11■□□□□ 0.49
RNPS1-213ENST00000565243 PABPN1Q86U42 306 aaKnown RBP eCLIP18.1■□□□□ 0.49
RNPS1-213ENST00000565243 RAPGEF2Q9Y4G8 1499 aa18.1■□□□□ 0.49
RNPS1-213ENST00000565243 VPS8Q8N3P4 1428 aa18.07■□□□□ 0.48
RNPS1-213ENST00000565243 BAZ1BQ9UIG0 1483 aaKnown RBP18■□□□□ 0.47
RNPS1-213ENST00000565243 ATAD2BQ9ULI0 1458 aa17.97■□□□□ 0.47
RNPS1-213ENST00000565243 RANGAP1P46060 587 aaPredicted RBP17.94■□□□□ 0.46
RNPS1-213ENST00000565243 TOP2BQ02880 1626 aa17.94■□□□□ 0.46
RNPS1-213ENST00000565243 ARAP1Q96P48 1450 aa17.91■□□□□ 0.46
RNPS1-213ENST00000565243 BIVM-ERCC5R4GMW8 1640 aa17.9■□□□□ 0.46
RNPS1-213ENST00000565243 DHX57Q6P158 1386 aaKnown RBP17.89■□□□□ 0.45
RNPS1-213ENST00000565243 KANK4Q5T7N3 995 aaPredicted RBP17.83■□□□□ 0.45
RNPS1-213ENST00000565243 PRXQ9BXM0 1461 aa17.82■□□□□ 0.44
RNPS1-213ENST00000565243 ERICH3Q5RHP9 1530 aa17.8■□□□□ 0.44
RNPS1-213ENST00000565243 APLP2Q06481 763 aa17.75■□□□□ 0.43
RNPS1-213ENST00000565243 CUX1P39880 1505 aa17.75■□□□□ 0.43
RNPS1-213ENST00000565243 RRBP1Q9P2E9 1410 aaKnown RBP17.73■□□□□ 0.43
RNPS1-213ENST00000565243 CUX2O14529 1486 aa17.69■□□□□ 0.42
RNPS1-213ENST00000565243 CLSPNQ9HAW4 1339 aa17.69■□□□□ 0.42
RNPS1-213ENST00000565243 ARHGAP35Q9NRY4 1499 aa17.66■□□□□ 0.42
RNPS1-213ENST00000565243 SUPT16HQ9Y5B9 1047 aaKnown RBP17.66■□□□□ 0.42
RNPS1-213ENST00000565243 MAPKBP1O60336 1514 aa17.64■□□□□ 0.41
RNPS1-213ENST00000565243 KCNH8Q96L42 1107 aa17.62■□□□□ 0.41
RNPS1-213ENST00000565243 MYT1Q01538 1121 aa17.6■□□□□ 0.41
RNPS1-213ENST00000565243 CCNB3Q8WWL7 1395 aa17.58■□□□□ 0.4
RNPS1-213ENST00000565243 HMGXB3Q12766 1538 aa17.55■□□□□ 0.4
RNPS1-213ENST00000565243 KIF27Q86VH2 1401 aa17.55■□□□□ 0.4
RNPS1-213ENST00000565243 ITGAEP38570 1179 aa17.52■□□□□ 0.4
RNPS1-213ENST00000565243 RAB3GAP2Q9H2M9 1393 aa17.52■□□□□ 0.4
RNPS1-213ENST00000565243 TIAM1Q13009 1591 aa17.52■□□□□ 0.39
RNPS1-213ENST00000565243 NCAPD3P42695 1498 aa17.5■□□□□ 0.39
RNPS1-213ENST00000565243 CFTRP13569 1480 aa17.49■□□□□ 0.39
RNPS1-213ENST00000565243 WDR97A6NE52 1622 aa17.49■□□□□ 0.39
RNPS1-213ENST00000565243 PRDM2Q13029 1718 aa17.48■□□□□ 0.39
RNPS1-213ENST00000565243 TSHZ2Q9NRE2 1034 aa17.48■□□□□ 0.39
RNPS1-213ENST00000565243 PHLDB1Q86UU1 1377 aa17.44■□□□□ 0.38
RNPS1-213ENST00000565243 IGF1RP08069 1367 aa17.42■□□□□ 0.38
RNPS1-213ENST00000565243 CFAP43Q8NDM7 1665 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms