RNA–Protein interactions for RNA: ENST00000564882.5

PARN-212, Transcript of poly(A)-specific ribonuclease, humanhuman

TSL 3

Gene PARN, Length 452 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARN-212ENST00000564882 NISCHQ9Y2I1 1504 aa16.65■□□□□ 0.26
PARN-212ENST00000564882 CHIC1Q5VXU3 224 aa15.65■□□□□ 0.1
PARN-212ENST00000564882 AEBP2Q6ZN18 517 aaPredicted RBP15.61■□□□□ 0.09
PARN-212ENST00000564882 CCDC180Q9P1Z9 1646 aa14.38□□□□□ -0.11
PARN-212ENST00000564882 ZCCHC6Q5VYS8 1495 aaKnown RBP14.13□□□□□ -0.15
PARN-212ENST00000564882 SHROOM4Q9ULL8 1493 aa13.81□□□□□ -0.2
PARN-212ENST00000564882 DCAF1Q9Y4B6 1507 aa13.81□□□□□ -0.2
PARN-212ENST00000564882 PHF23Q9BUL5 403 aaPredicted RBP13.68□□□□□ -0.22
PARN-212ENST00000564882 SUPT5HO00267 1087 aaKnown RBP13.49□□□□□ -0.25
PARN-212ENST00000564882 MYO15BQ96JP2 1530 aa13.43□□□□□ -0.26
PARN-212ENST00000564882 SENP3Q9H4L4 574 aaPredicted RBP13.4□□□□□ -0.26
PARN-212ENST00000564882 ABCC9O60706 1549 aa13.39□□□□□ -0.27
PARN-212ENST00000564882 DCAF8L2P0C7V8 631 aa13.26□□□□□ -0.29
PARN-212ENST00000564882 SLC24A1O60721 1099 aa13.21□□□□□ -0.29
PARN-212ENST00000564882 SCRIBQ14160 1630 aa13.21□□□□□ -0.3
PARN-212ENST00000564882 NACADO15069 1562 aa13.15□□□□□ -0.3
PARN-212ENST00000564882 RSF1Q96T23 1441 aaPredicted RBP13.08□□□□□ -0.32
PARN-212ENST00000564882 RB1CC1Q8TDY2 1594 aa13.07□□□□□ -0.32
PARN-212ENST00000564882 HRCP23327 699 aa12.9□□□□□ -0.34
PARN-212ENST00000564882 PLPPR3Q6T4P5 718 aa12.89□□□□□ -0.35
PARN-212ENST00000564882 MROH2BQ7Z745 1585 aa12.89□□□□□ -0.35
PARN-212ENST00000564882 BAZ1AQ9NRL2 1556 aaPredicted RBP12.89□□□□□ -0.35
PARN-212ENST00000564882 EIF4G1Q04637 1599 aaKnown RBP12.88□□□□□ -0.35
PARN-212ENST00000564882 CECR2Q9BXF3 1484 aa12.86□□□□□ -0.35
PARN-212ENST00000564882 UNC13AQ9UPW8 1703 aa12.86□□□□□ -0.35
PARN-212ENST00000564882 WIZO95785 1651 aa12.86□□□□□ -0.35
PARN-212ENST00000564882 LOC105371045A0A1W2PR82 267 aa12.75□□□□□ -0.37
PARN-212ENST00000564882 SMARCA4P51532 1647 aa12.73□□□□□ -0.37
PARN-212ENST00000564882 PCGF6Q9BYE7 350 aa12.73□□□□□ -0.37
PARN-212ENST00000564882 TOP2AP11388 1531 aaKnown RBP12.72□□□□□ -0.37
PARN-212ENST00000564882 TRIM41Q8WV44 630 aa12.65□□□□□ -0.38
PARN-212ENST00000564882 SMARCA2P51531 1590 aa12.64□□□□□ -0.39
PARN-212ENST00000564882 TRIM26Q12899 539 aaPredicted RBP12.63□□□□□ -0.39
PARN-212ENST00000564882 BICRAQ9NZM4 1560 aa12.59□□□□□ -0.39
PARN-212ENST00000564882 PEG3Q9GZU2 1588 aa12.56□□□□□ -0.4
PARN-212ENST00000564882 CCDC88BA6NC98 1476 aa12.53□□□□□ -0.4
PARN-212ENST00000564882 ABCC8Q09428 1581 aa12.48□□□□□ -0.41
PARN-212ENST00000564882 PPARGC1BQ86YN6 1023 aaKnown RBP12.47□□□□□ -0.41
PARN-212ENST00000564882 FAM9AQ8IZU1 332 aaPredicted RBP12.42□□□□□ -0.42
PARN-212ENST00000564882 ZEB1P37275 1124 aaPredicted RBP12.41□□□□□ -0.42
PARN-212ENST00000564882 EEA1Q15075 1411 aa12.41□□□□□ -0.42
PARN-212ENST00000564882 WRNQ14191 1432 aaPredicted RBP eCLIP12.4□□□□□ -0.42
PARN-212ENST00000564882 KIF21BO75037 1637 aa12.32□□□□□ -0.44
PARN-212ENST00000564882 TNIKQ9UKE5 1360 aa12.31□□□□□ -0.44
PARN-212ENST00000564882 SYNJ1O43426 1573 aa12.3□□□□□ -0.44
PARN-212ENST00000564882 ATAD2BQ9ULI0 1458 aa12.3□□□□□ -0.44
PARN-212ENST00000564882 SOGA1O94964 1423 aa12.29□□□□□ -0.44
PARN-212ENST00000564882 CEP162Q5TB80 1403 aa12.29□□□□□ -0.44
PARN-212ENST00000564882 GOLGA3Q08378 1498 aa12.27□□□□□ -0.44
PARN-212ENST00000564882 FOXD1Q16676 465 aa12.27□□□□□ -0.45
PARN-212ENST00000564882 BIVM-ERCC5R4GMW8 1640 aa12.26□□□□□ -0.45
PARN-212ENST00000564882 BAZ1BQ9UIG0 1483 aaKnown RBP12.25□□□□□ -0.45
PARN-212ENST00000564882 RUSC2Q8N2Y8 1516 aa12.25□□□□□ -0.45
PARN-212ENST00000564882 TOP2BQ02880 1626 aa12.21□□□□□ -0.46
PARN-212ENST00000564882 HMGXB3Q12766 1538 aa12.21□□□□□ -0.46
PARN-212ENST00000564882 CEP164Q9UPV0 1460 aa12.21□□□□□ -0.46
PARN-212ENST00000564882 PABPN1Q86U42 306 aaKnown RBP eCLIP12.19□□□□□ -0.46
PARN-212ENST00000564882 PRDM2Q13029 1718 aa12.19□□□□□ -0.46
PARN-212ENST00000564882 CSRNP3Q8WYN3 585 aa12.18□□□□□ -0.46
PARN-212ENST00000564882 EHMT2Q96KQ7 1210 aa12.18□□□□□ -0.46
PARN-212ENST00000564882 MYT1Q01538 1121 aa12.14□□□□□ -0.47
PARN-212ENST00000564882 DAXXQ9UER7 740 aaPredicted RBP12.14□□□□□ -0.47
PARN-212ENST00000564882 TTBK1Q5TCY1 1321 aaPredicted RBP12.12□□□□□ -0.47
PARN-212ENST00000564882 ERICH3Q5RHP9 1530 aa12.11□□□□□ -0.47
PARN-212ENST00000564882 NCAPD3P42695 1498 aa12.09□□□□□ -0.47
PARN-212ENST00000564882 VPS8Q8N3P4 1428 aa12.06□□□□□ -0.48
PARN-212ENST00000564882 CLIP1P30622 1438 aa12.05□□□□□ -0.48
PARN-212ENST00000564882 RAPGEF2Q9Y4G8 1499 aa12.05□□□□□ -0.48
PARN-212ENST00000564882 CUX1P39880 1505 aa12.02□□□□□ -0.48
PARN-212ENST00000564882 PRXQ9BXM0 1461 aa12.02□□□□□ -0.49
PARN-212ENST00000564882 UBTFP17480 764 aaKnown RBP12.01□□□□□ -0.49
PARN-212ENST00000564882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12□□□□□ -0.49
PARN-212ENST00000564882 CFTRP13569 1480 aa11.99□□□□□ -0.49
PARN-212ENST00000564882 CCER1Q8TC90 406 aaPredicted RBP11.98□□□□□ -0.49
PARN-212ENST00000564882 ADRA2BP18089 450 aa11.96□□□□□ -0.49
PARN-212ENST00000564882 ARAP1Q96P48 1450 aa11.95□□□□□ -0.5
PARN-212ENST00000564882 PPP6R1Q9UPN7 881 aa11.95□□□□□ -0.5
PARN-212ENST00000564882 KIF27Q86VH2 1401 aa11.89□□□□□ -0.51
PARN-212ENST00000564882 PELP1Q8IZL8 1130 aaKnown RBP11.85□□□□□ -0.51
PARN-212ENST00000564882 NCBP3Q53F19 620 aaKnown RBP11.84□□□□□ -0.51
PARN-212ENST00000564882 ARHGAP35Q9NRY4 1499 aa11.83□□□□□ -0.52
PARN-212ENST00000564882 RRBP1Q9P2E9 1410 aaKnown RBP11.82□□□□□ -0.52
PARN-212ENST00000564882 SCAF1Q9H7N4 1312 aaKnown RBP11.82□□□□□ -0.52
PARN-212ENST00000564882 CUX2O14529 1486 aa11.82□□□□□ -0.52
PARN-212ENST00000564882 MAP3K1Q13233 1512 aa11.81□□□□□ -0.52
PARN-212ENST00000564882 CFAP43Q8NDM7 1665 aa11.81□□□□□ -0.52
PARN-212ENST00000564882 DIEXFQ68CQ4 756 aaKnown RBP11.79□□□□□ -0.52
PARN-212ENST00000564882 CC2D2AQ9P2K1 1620 aa11.78□□□□□ -0.52
PARN-212ENST00000564882 CADPSQ9ULU8 1353 aa11.78□□□□□ -0.52
PARN-212ENST00000564882 FGD5Q6ZNL6 1462 aa11.77□□□□□ -0.52
PARN-212ENST00000564882 TIAM1Q13009 1591 aa11.77□□□□□ -0.53
PARN-212ENST00000564882 ZNF316A6NFI3 1004 aaPredicted RBP11.77□□□□□ -0.53
PARN-212ENST00000564882 WDR97A6NE52 1622 aa11.77□□□□□ -0.53
PARN-212ENST00000564882 DNMBPQ6XZF7 1577 aa11.76□□□□□ -0.53
PARN-212ENST00000564882 CLSPNQ9HAW4 1339 aa11.76□□□□□ -0.53
PARN-212ENST00000564882 APLP2Q06481 763 aa11.75□□□□□ -0.53
PARN-212ENST00000564882 ACIN1Q9UKV3 1341 aaKnown RBP11.75□□□□□ -0.53
PARN-212ENST00000564882 CTTNBP2Q8WZ74 1663 aa11.74□□□□□ -0.53
PARN-212ENST00000564882 CUL7Q14999 1698 aa11.73□□□□□ -0.53
PARN-212ENST00000564882 DHX57Q6P158 1386 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms