RNA–Protein interactions for RNA: ENST00000564563.1

PDPR-206, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, humanhuman

TSL 2

Gene PDPR, Length 2,381 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPR-206ENST00000564563 NISCHQ9Y2I1 1504 aa26.54■■□□□ 1.84
PDPR-206ENST00000564563 CCDC180Q9P1Z9 1646 aa22.91■■□□□ 1.26
PDPR-206ENST00000564563 ZCCHC6Q5VYS8 1495 aaKnown RBP22.4■■□□□ 1.18
PDPR-206ENST00000564563 SHROOM4Q9ULL8 1493 aa22.01■■□□□ 1.11
PDPR-206ENST00000564563 DCAF1Q9Y4B6 1507 aa21.96■■□□□ 1.11
PDPR-206ENST00000564563 DCAF8L2P0C7V8 631 aa21.72■■□□□ 1.07
PDPR-206ENST00000564563 PELP1Q8IZL8 1130 aaKnown RBP21.55■■□□□ 1.04
PDPR-206ENST00000564563 MYO15BQ96JP2 1530 aa21.49■■□□□ 1.03
PDPR-206ENST00000564563 SUPT5HO00267 1087 aaKnown RBP21.45■■□□□ 1.02
PDPR-206ENST00000564563 NACADO15069 1562 aa21.2■□□□□ 0.98
PDPR-206ENST00000564563 MYT1Q01538 1121 aa21.15■□□□□ 0.98
PDPR-206ENST00000564563 ABCC9O60706 1549 aa21.14■□□□□ 0.97
PDPR-206ENST00000564563 SCRIBQ14160 1630 aa21.12■□□□□ 0.97
PDPR-206ENST00000564563 RB1CC1Q8TDY2 1594 aa20.89■□□□□ 0.93
PDPR-206ENST00000564563 CHIC1Q5VXU3 224 aa20.83■□□□□ 0.93
PDPR-206ENST00000564563 RSF1Q96T23 1441 aaPredicted RBP20.79■□□□□ 0.92
PDPR-206ENST00000564563 CECR2Q9BXF3 1484 aa20.56■□□□□ 0.88
PDPR-206ENST00000564563 HRCP23327 699 aa20.54■□□□□ 0.88
PDPR-206ENST00000564563 MROH2BQ7Z745 1585 aa20.51■□□□□ 0.87
PDPR-206ENST00000564563 UNC13AQ9UPW8 1703 aa20.51■□□□□ 0.87
PDPR-206ENST00000564563 BAZ1AQ9NRL2 1556 aaPredicted RBP20.46■□□□□ 0.87
PDPR-206ENST00000564563 WIZO95785 1651 aa20.39■□□□□ 0.85
PDPR-206ENST00000564563 SMARCA4P51532 1647 aa20.29■□□□□ 0.84
PDPR-206ENST00000564563 TTBK1Q5TCY1 1321 aaPredicted RBP20.24■□□□□ 0.83
PDPR-206ENST00000564563 BICRAQ9NZM4 1560 aa20.23■□□□□ 0.83
PDPR-206ENST00000564563 TOP2AP11388 1531 aaKnown RBP20.2■□□□□ 0.82
PDPR-206ENST00000564563 TRIM41Q8WV44 630 aa20.15■□□□□ 0.82
PDPR-206ENST00000564563 EIF4G1Q04637 1599 aaKnown RBP20.08■□□□□ 0.81
PDPR-206ENST00000564563 LOC105371045A0A1W2PR82 267 aa20.04■□□□□ 0.8
PDPR-206ENST00000564563 PABPN1Q86U42 306 aaKnown RBP eCLIP20.03■□□□□ 0.8
PDPR-206ENST00000564563 PEG3Q9GZU2 1588 aa20.03■□□□□ 0.8
PDPR-206ENST00000564563 SMARCA2P51531 1590 aa20.02■□□□□ 0.8
PDPR-206ENST00000564563 CCDC88BA6NC98 1476 aa19.99■□□□□ 0.79
PDPR-206ENST00000564563 ATAD2BQ9ULI0 1458 aa19.81■□□□□ 0.76
PDPR-206ENST00000564563 SCAF1Q9H7N4 1312 aaKnown RBP19.79■□□□□ 0.76
PDPR-206ENST00000564563 FAM9AQ8IZU1 332 aaPredicted RBP19.77■□□□□ 0.76
PDPR-206ENST00000564563 BAZ1BQ9UIG0 1483 aaKnown RBP19.74■□□□□ 0.75
PDPR-206ENST00000564563 ABCC8Q09428 1581 aa19.74■□□□□ 0.75
PDPR-206ENST00000564563 PCGF6Q9BYE7 350 aa19.72■□□□□ 0.75
PDPR-206ENST00000564563 PPARGC1BQ86YN6 1023 aaKnown RBP19.65■□□□□ 0.74
PDPR-206ENST00000564563 TRIM26Q12899 539 aaPredicted RBP19.61■□□□□ 0.73
PDPR-206ENST00000564563 EEA1Q15075 1411 aa19.6■□□□□ 0.73
PDPR-206ENST00000564563 HMGXB3Q12766 1538 aa19.58■□□□□ 0.73
PDPR-206ENST00000564563 WRNQ14191 1432 aaPredicted RBP eCLIP19.56■□□□□ 0.72
PDPR-206ENST00000564563 NCAPD3P42695 1498 aa19.55■□□□□ 0.72
PDPR-206ENST00000564563 SOGA1O94964 1423 aa19.48■□□□□ 0.71
PDPR-206ENST00000564563 SYNJ1O43426 1573 aa19.46■□□□□ 0.71
PDPR-206ENST00000564563 EHMT2Q96KQ7 1210 aa19.46■□□□□ 0.71
PDPR-206ENST00000564563 CSRNP3Q8WYN3 585 aa19.41■□□□□ 0.7
PDPR-206ENST00000564563 TNIKQ9UKE5 1360 aa19.38■□□□□ 0.69
PDPR-206ENST00000564563 RUSC2Q8N2Y8 1516 aa19.37■□□□□ 0.69
PDPR-206ENST00000564563 TOP2BQ02880 1626 aa19.35■□□□□ 0.69
PDPR-206ENST00000564563 GOLGA3Q08378 1498 aa19.34■□□□□ 0.69
PDPR-206ENST00000564563 BIVM-ERCC5R4GMW8 1640 aa19.33■□□□□ 0.68
PDPR-206ENST00000564563 KIF21BO75037 1637 aa19.31■□□□□ 0.68
PDPR-206ENST00000564563 CEP162Q5TB80 1403 aa19.3■□□□□ 0.68
PDPR-206ENST00000564563 CEP164Q9UPV0 1460 aa19.28■□□□□ 0.68
PDPR-206ENST00000564563 CFTRP13569 1480 aa19.27■□□□□ 0.67
PDPR-206ENST00000564563 PRDM2Q13029 1718 aa19.26■□□□□ 0.67
PDPR-206ENST00000564563 UBTFP17480 764 aaKnown RBP19.21■□□□□ 0.67
PDPR-206ENST00000564563 ZEB1P37275 1124 aaPredicted RBP19.18■□□□□ 0.66
PDPR-206ENST00000564563 CC2D2AQ9P2K1 1620 aa19.16■□□□□ 0.66
PDPR-206ENST00000564563 ACIN1Q9UKV3 1341 aaKnown RBP19.16■□□□□ 0.66
PDPR-206ENST00000564563 CUX1P39880 1505 aa19.15■□□□□ 0.66
PDPR-206ENST00000564563 BCL11AQ9H165 835 aa19.14■□□□□ 0.65
PDPR-206ENST00000564563 PRKCSHP14314 528 aaPredicted RBP19.13■□□□□ 0.65
PDPR-206ENST00000564563 CADPSQ9ULU8 1353 aa19.09■□□□□ 0.65
PDPR-206ENST00000564563 ERICH3Q5RHP9 1530 aa19.08■□□□□ 0.64
PDPR-206ENST00000564563 CENPBP07199 599 aaPredicted RBP19.07■□□□□ 0.64
PDPR-206ENST00000564563 RAPGEF2Q9Y4G8 1499 aa19.06■□□□□ 0.64
PDPR-206ENST00000564563 ERICH6Q7L0X2 663 aa19.04■□□□□ 0.64
PDPR-206ENST00000564563 CLIP1P30622 1438 aa19.04■□□□□ 0.64
PDPR-206ENST00000564563 PRXQ9BXM0 1461 aa19.03■□□□□ 0.64
PDPR-206ENST00000564563 KIF27Q86VH2 1401 aa19.03■□□□□ 0.64
PDPR-206ENST00000564563 VPS8Q8N3P4 1428 aa18.95■□□□□ 0.62
PDPR-206ENST00000564563 GTF3C3Q9Y5Q9 886 aa18.9■□□□□ 0.62
PDPR-206ENST00000564563 NEUROD1Q13562 356 aa18.89■□□□□ 0.61
PDPR-206ENST00000564563 FANCD2Q9BXW9 1451 aa18.88■□□□□ 0.61
PDPR-206ENST00000564563 FGD5Q6ZNL6 1462 aa18.86■□□□□ 0.61
PDPR-206ENST00000564563 CUX2O14529 1486 aa18.84■□□□□ 0.61
PDPR-206ENST00000564563 APLP2Q06481 763 aa18.84■□□□□ 0.61
PDPR-206ENST00000564563 DNMBPQ6XZF7 1577 aa18.83■□□□□ 0.6
PDPR-206ENST00000564563 LAMC3Q9Y6N6 1575 aa18.81■□□□□ 0.6
PDPR-206ENST00000564563 IGF1RP08069 1367 aa18.78■□□□□ 0.6
PDPR-206ENST00000564563 ARAP1Q96P48 1450 aa18.78■□□□□ 0.6
PDPR-206ENST00000564563 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
PDPR-206ENST00000564563 CCER1Q8TC90 406 aaPredicted RBP18.74■□□□□ 0.59
PDPR-206ENST00000564563 NESP48681 1621 aa18.73■□□□□ 0.59
PDPR-206ENST00000564563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.72■□□□□ 0.59
PDPR-206ENST00000564563 ABCA10Q8WWZ4 1543 aa18.71■□□□□ 0.59
PDPR-206ENST00000564563 RANGAP1P46060 587 aaPredicted RBP18.7■□□□□ 0.58
PDPR-206ENST00000564563 CARMIL1Q5VZK9 1371 aa18.7■□□□□ 0.58
PDPR-206ENST00000564563 POLA1P09884 1462 aaPredicted RBP18.68■□□□□ 0.58
PDPR-206ENST00000564563 ARHGAP35Q9NRY4 1499 aa18.67■□□□□ 0.58
PDPR-206ENST00000564563 PDS5BQ9NTI5 1447 aa18.64■□□□□ 0.57
PDPR-206ENST00000564563 ANP32EQ9BTT0 268 aa18.63■□□□□ 0.57
PDPR-206ENST00000564563 CUL7Q14999 1698 aa18.63■□□□□ 0.57
PDPR-206ENST00000564563 RAD54L2Q9Y4B4 1467 aa18.62■□□□□ 0.57
PDPR-206ENST00000564563 WDR97A6NE52 1622 aa18.61■□□□□ 0.57
PDPR-206ENST00000564563 URB2Q14146 1524 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms