RNA–Protein interactions for RNA: ENST00000564561.1

AC099511.1-201, humanhuman

TSL 2 BASIC

Gene AC099511.1, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC099511.1-201ENST00000564561 AEBP2Q6ZN18 517 aaPredicted RBP22.26■■□□□ 1.15
AC099511.1-201ENST00000564561 CHIC1Q5VXU3 224 aa21.42■■□□□ 1.02
AC099511.1-201ENST00000564561 PHF23Q9BUL5 403 aaPredicted RBP18.91■□□□□ 0.62
AC099511.1-201ENST00000564561 SENP3Q9H4L4 574 aaPredicted RBP18.74■□□□□ 0.59
AC099511.1-201ENST00000564561 FOXD1Q16676 465 aa17.54■□□□□ 0.4
AC099511.1-201ENST00000564561 PLPPR3Q6T4P5 718 aa17.23■□□□□ 0.35
AC099511.1-201ENST00000564561 PPP6R1Q9UPN7 881 aa16.78■□□□□ 0.28
AC099511.1-201ENST00000564561 ADRA2BP18089 450 aa16.71■□□□□ 0.27
AC099511.1-201ENST00000564561 PIAS4Q8N2W9 510 aaPredicted RBP16.41■□□□□ 0.22
AC099511.1-201ENST00000564561 MSH5O43196 834 aa16.12■□□□□ 0.17
AC099511.1-201ENST00000564561 POTEDQ86YR6 584 aa15.9■□□□□ 0.14
AC099511.1-201ENST00000564561 MAPK8IP2Q13387 824 aaPredicted RBP15.26■□□□□ 0.03
AC099511.1-201ENST00000564561 PPP4R3CPQ6ZMV5 832 aa15.21■□□□□ 0.03
AC099511.1-201ENST00000564561 SCAF1Q9H7N4 1312 aaKnown RBP15.1■□□□□ 0.01
AC099511.1-201ENST00000564561 DMRT2Q9Y5R5 561 aa14.97□□□□□ -0.01
AC099511.1-201ENST00000564561 CNKSR2Q8WXI2 1034 aa14.79□□□□□ -0.04
AC099511.1-201ENST00000564561 NISCHQ9Y2I1 1504 aa14.77□□□□□ -0.04
AC099511.1-201ENST00000564561 KCNA4P22459 653 aa14.67□□□□□ -0.06
AC099511.1-201ENST00000564561 NCBP3Q53F19 620 aaKnown RBP14.64□□□□□ -0.07
AC099511.1-201ENST00000564561 HOXD11P31277 338 aaPredicted RBP14.6□□□□□ -0.07
AC099511.1-201ENST00000564561 NPM3O75607 178 aaKnown RBP14.56□□□□□ -0.08
AC099511.1-201ENST00000564561 RNF216Q9NWF9 866 aaPredicted RBP14.56□□□□□ -0.08
AC099511.1-201ENST00000564561 DCAF8L1A6NGE4 600 aa14.31□□□□□ -0.12
AC099511.1-201ENST00000564561 DNAJC5BQ9UF47 199 aa14.12□□□□□ -0.15
AC099511.1-201ENST00000564561 RNF39Q9H2S5 420 aa13.88□□□□□ -0.19
AC099511.1-201ENST00000564561 SLC4A2P04920 1241 aa13.85□□□□□ -0.19
AC099511.1-201ENST00000564561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.85□□□□□ -0.19
AC099511.1-201ENST00000564561 SLC4A1APQ9BWU0 796 aaKnown RBP13.85□□□□□ -0.19
AC099511.1-201ENST00000564561 U3KPZ7 1027 aaPredicted RBP13.69□□□□□ -0.22
AC099511.1-201ENST00000564561 CACNB1Q02641 598 aaPredicted RBP13.64□□□□□ -0.23
AC099511.1-201ENST00000564561 C1QBPQ07021 282 aaKnown RBP13.63□□□□□ -0.23
AC099511.1-201ENST00000564561 ZBTB22O15209 634 aa13.55□□□□□ -0.24
AC099511.1-201ENST00000564561 FOXD4L1Q9NU39 408 aa13.48□□□□□ -0.25
AC099511.1-201ENST00000564561 SPINK5Q9NQ38 1064 aaPredicted RBP13.4□□□□□ -0.26
AC099511.1-201ENST00000564561 MYCNP04198 464 aaPredicted RBP13.37□□□□□ -0.27
AC099511.1-201ENST00000564561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.26□□□□□ -0.29
AC099511.1-201ENST00000564561 CAPN15O75808 1086 aa13.26□□□□□ -0.29
AC099511.1-201ENST00000564561 HNRNPUL2Q1KMD3 747 aaKnown RBP13.26□□□□□ -0.29
AC099511.1-201ENST00000564561 SAMD1Q6SPF0 538 aaPredicted RBP13.25□□□□□ -0.29
AC099511.1-201ENST00000564561 CSRNP3Q8WYN3 585 aa13.25□□□□□ -0.29
AC099511.1-201ENST00000564561 EHMT2Q96KQ7 1210 aa13.24□□□□□ -0.29
AC099511.1-201ENST00000564561 ATF5Q9Y2D1 282 aaPredicted RBP13.19□□□□□ -0.3
AC099511.1-201ENST00000564561 TRHP20396 242 aaPredicted RBP13.17□□□□□ -0.3
AC099511.1-201ENST00000564561 DSG3P32926 999 aa13.14□□□□□ -0.31
AC099511.1-201ENST00000564561 APLP2Q06481 763 aa13.14□□□□□ -0.31
AC099511.1-201ENST00000564561 ZNF219Q9P2Y4 722 aaPredicted RBP13.08□□□□□ -0.32
AC099511.1-201ENST00000564561 ABCB7O75027 752 aa13.06□□□□□ -0.32
AC099511.1-201ENST00000564561 ATXN8OSP0DMR3 200 aa12.99□□□□□ -0.33
AC099511.1-201ENST00000564561 POLA2Q14181 598 aa12.92□□□□□ -0.34
AC099511.1-201ENST00000564561 CCDC180Q9P1Z9 1646 aa12.85□□□□□ -0.35
AC099511.1-201ENST00000564561 ABCC9O60706 1549 aa12.6□□□□□ -0.39
AC099511.1-201ENST00000564561 MKRN4PQ13434 485 aaPredicted RBP12.58□□□□□ -0.4
AC099511.1-201ENST00000564561 ZBTB12Q9Y330 459 aaPredicted RBP12.55□□□□□ -0.4
AC099511.1-201ENST00000564561 OSCARQ8IYS5 282 aa12.49□□□□□ -0.41
AC099511.1-201ENST00000564561 FBLN2P98095 1184 aa12.45□□□□□ -0.42
AC099511.1-201ENST00000564561 RBM42Q9BTD8 480 aaKnown RBP12.4□□□□□ -0.42
AC099511.1-201ENST00000564561 ZCCHC6Q5VYS8 1495 aaKnown RBP12.39□□□□□ -0.43
AC099511.1-201ENST00000564561 POTEHQ6S545 545 aa12.29□□□□□ -0.44
AC099511.1-201ENST00000564561 DCAF1Q9Y4B6 1507 aa12.28□□□□□ -0.44
AC099511.1-201ENST00000564561 SPDYE2BA6NHP3 402 aa12.27□□□□□ -0.45
AC099511.1-201ENST00000564561 SPDYE6P0CI01 402 aa12.27□□□□□ -0.45
AC099511.1-201ENST00000564561 SPDYE2Q495Y8 402 aa12.27□□□□□ -0.45
AC099511.1-201ENST00000564561 AKT1S1Q96B36 256 aa12.26□□□□□ -0.45
AC099511.1-201ENST00000564561 DCAF8L2P0C7V8 631 aa12.24□□□□□ -0.45
AC099511.1-201ENST00000564561 ZNF692Q9BU19 519 aaPredicted RBP12.22□□□□□ -0.45
AC099511.1-201ENST00000564561 SSUH2Q9Y2M2 353 aa12.21□□□□□ -0.45
AC099511.1-201ENST00000564561 REM2Q8IYK8 340 aaPredicted RBP12.19□□□□□ -0.46
AC099511.1-201ENST00000564561 MYO15BQ96JP2 1530 aa12.19□□□□□ -0.46
AC099511.1-201ENST00000564561 SPDYE4A6NLX3 237 aa12.1□□□□□ -0.47
AC099511.1-201ENST00000564561 PITPNM1O00562 1244 aa12.07□□□□□ -0.48
AC099511.1-201ENST00000564561 PABPN1Q86U42 306 aaKnown RBP eCLIP12.07□□□□□ -0.48
AC099511.1-201ENST00000564561 NACADO15069 1562 aa12.06□□□□□ -0.48
AC099511.1-201ENST00000564561 CHRDL2Q6WN34 429 aa12.06□□□□□ -0.48
AC099511.1-201ENST00000564561 RB1CC1Q8TDY2 1594 aa12.04□□□□□ -0.48
AC099511.1-201ENST00000564561 UNC13AQ9UPW8 1703 aa11.97□□□□□ -0.49
AC099511.1-201ENST00000564561 SPDYE1Q8NFV5 336 aaPredicted RBP11.94□□□□□ -0.5
AC099511.1-201ENST00000564561 CLEC11AQ9Y240 323 aa11.94□□□□□ -0.5
AC099511.1-201ENST00000564561 SHROOM4Q9ULL8 1493 aa11.94□□□□□ -0.5
AC099511.1-201ENST00000564561 FKBP8Q14318 412 aa11.93□□□□□ -0.5
AC099511.1-201ENST00000564561 PROM2Q8N271 834 aa11.92□□□□□ -0.5
AC099511.1-201ENST00000564561 PIP4P2Q8N4L2 257 aa11.9□□□□□ -0.5
AC099511.1-201ENST00000564561 FXR2P51116 673 aaKnown RBP eCLIP11.88□□□□□ -0.51
AC099511.1-201ENST00000564561 BICRAQ9NZM4 1560 aa11.85□□□□□ -0.51
AC099511.1-201ENST00000564561 PRR29P0C7W0 189 aa11.79□□□□□ -0.52
AC099511.1-201ENST00000564561 CHADLQ6NUI6 762 aa11.76□□□□□ -0.53
AC099511.1-201ENST00000564561 SCRIBQ14160 1630 aa11.75□□□□□ -0.53
AC099511.1-201ENST00000564561 PRKAR2AP13861 404 aaKnown RBP11.74□□□□□ -0.53
AC099511.1-201ENST00000564561 STAG3Q9UJ98 1225 aa11.73□□□□□ -0.53
AC099511.1-201ENST00000564561 CREBZFQ9NS37 354 aa11.67□□□□□ -0.54
AC099511.1-201ENST00000564561 SUPT5HO00267 1087 aaKnown RBP11.56□□□□□ -0.56
AC099511.1-201ENST00000564561 EVX2Q03828 476 aa11.56□□□□□ -0.56
AC099511.1-201ENST00000564561 FARP1Q9Y4F1 1045 aaPredicted RBP11.56□□□□□ -0.56
AC099511.1-201ENST00000564561 MNX1P50219 401 aaPredicted RBP11.55□□□□□ -0.56
AC099511.1-201ENST00000564561 HAX1O00165 279 aa11.52□□□□□ -0.57
AC099511.1-201ENST00000564561 C19orf67A6NJJ6 358 aa11.48□□□□□ -0.57
AC099511.1-201ENST00000564561 MIER1Q8N108 512 aa11.48□□□□□ -0.57
AC099511.1-201ENST00000564561 EIF4G1Q04637 1599 aaKnown RBP11.45□□□□□ -0.58
AC099511.1-201ENST00000564561 RSF1Q96T23 1441 aaPredicted RBP11.45□□□□□ -0.58
AC099511.1-201ENST00000564561 FBXO3Q9UK99 471 aa11.45□□□□□ -0.58
AC099511.1-201ENST00000564561 CC2D2AQ9P2K1 1620 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms