RNA–Protein interactions for RNA: ENST00000563201.1

TNRC6A-210, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 3

Gene TNRC6A, Length 276 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-210ENST00000563201 AEBP2Q6ZN18 517 aaPredicted RBP11.21□□□□□ -0.61
TNRC6A-210ENST00000563201 CHIC1Q5VXU3 224 aa10.58□□□□□ -0.72
TNRC6A-210ENST00000563201 SENP3Q9H4L4 574 aaPredicted RBP9.69□□□□□ -0.86
TNRC6A-210ENST00000563201 PHF23Q9BUL5 403 aaPredicted RBP9.48□□□□□ -0.89
TNRC6A-210ENST00000563201 FOXD1Q16676 465 aa9.01□□□□□ -0.97
TNRC6A-210ENST00000563201 POTEDQ86YR6 584 aa8.73□□□□□ -1.01
TNRC6A-210ENST00000563201 MSH5O43196 834 aa8.6□□□□□ -1.03
TNRC6A-210ENST00000563201 PIAS4Q8N2W9 510 aaPredicted RBP8.38□□□□□ -1.07
TNRC6A-210ENST00000563201 PLPPR3Q6T4P5 718 aa8.29□□□□□ -1.08
TNRC6A-210ENST00000563201 PPP6R1Q9UPN7 881 aa8.19□□□□□ -1.1
TNRC6A-210ENST00000563201 ADRA2BP18089 450 aa8.17□□□□□ -1.1
TNRC6A-210ENST00000563201 DMRT2Q9Y5R5 561 aa7.63□□□□□ -1.19
TNRC6A-210ENST00000563201 SCAF1Q9H7N4 1312 aaKnown RBP7.59□□□□□ -1.19
TNRC6A-210ENST00000563201 MAPK8IP2Q13387 824 aaPredicted RBP7.56□□□□□ -1.2
TNRC6A-210ENST00000563201 CACNB1Q02641 598 aaPredicted RBP7.48□□□□□ -1.21
TNRC6A-210ENST00000563201 DCAF8L1A6NGE4 600 aa7.31□□□□□ -1.24
TNRC6A-210ENST00000563201 RNF39Q9H2S5 420 aa7.27□□□□□ -1.25
TNRC6A-210ENST00000563201 HOXD11P31277 338 aaPredicted RBP7.26□□□□□ -1.25
TNRC6A-210ENST00000563201 PPP4R3CPQ6ZMV5 832 aa7.2□□□□□ -1.26
TNRC6A-210ENST00000563201 C1QBPQ07021 282 aaKnown RBP7.18□□□□□ -1.26
TNRC6A-210ENST00000563201 CNKSR2Q8WXI2 1034 aa7.15□□□□□ -1.26
TNRC6A-210ENST00000563201 RNF216Q9NWF9 866 aaPredicted RBP7.15□□□□□ -1.26
TNRC6A-210ENST00000563201 DNAJC5BQ9UF47 199 aa7.12□□□□□ -1.27
TNRC6A-210ENST00000563201 NCBP3Q53F19 620 aaKnown RBP6.91□□□□□ -1.3
TNRC6A-210ENST00000563201 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.91□□□□□ -1.32e-8■□□□□ 8.9
TNRC6A-210ENST00000563201 POTEHQ6S545 545 aa6.81□□□□□ -1.32
TNRC6A-210ENST00000563201 NPM3O75607 178 aaKnown RBP6.74□□□□□ -1.33
TNRC6A-210ENST00000563201 DSG3P32926 999 aa6.72□□□□□ -1.33
TNRC6A-210ENST00000563201 CAPN15O75808 1086 aa6.71□□□□□ -1.34
TNRC6A-210ENST00000563201 U3KPZ7 1027 aaPredicted RBP6.71□□□□□ -1.34
TNRC6A-210ENST00000563201 SPINK5Q9NQ38 1064 aaPredicted RBP6.67□□□□□ -1.34
TNRC6A-210ENST00000563201 APLP2Q06481 763 aa6.62□□□□□ -1.35
TNRC6A-210ENST00000563201 ZNF219Q9P2Y4 722 aaPredicted RBP6.57□□□□□ -1.36
TNRC6A-210ENST00000563201 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.53□□□□□ -1.36
TNRC6A-210ENST00000563201 HNRNPUL2Q1KMD3 747 aaKnown RBP6.53□□□□□ -1.36
TNRC6A-210ENST00000563201 TRHP20396 242 aaPredicted RBP6.52□□□□□ -1.37
TNRC6A-210ENST00000563201 ABCB7O75027 752 aa6.49□□□□□ -1.37
TNRC6A-210ENST00000563201 RBM42Q9BTD8 480 aaKnown RBP6.49□□□□□ -1.37
TNRC6A-210ENST00000563201 SLC4A2P04920 1241 aa6.48□□□□□ -1.37
TNRC6A-210ENST00000563201 SAMD1Q6SPF0 538 aaPredicted RBP6.46□□□□□ -1.38
TNRC6A-210ENST00000563201 CHRDL2Q6WN34 429 aa6.39□□□□□ -1.39
TNRC6A-210ENST00000563201 KCNA4P22459 653 aa6.38□□□□□ -1.39
TNRC6A-210ENST00000563201 POLA2Q14181 598 aa6.3□□□□□ -1.4
TNRC6A-210ENST00000563201 MYCNP04198 464 aaPredicted RBP6.29□□□□□ -1.4
TNRC6A-210ENST00000563201 SP7Q8TDD2 431 aaPredicted RBP6.28□□□□□ -1.4
TNRC6A-210ENST00000563201 AKT1S1Q96B36 256 aa6.25□□□□□ -1.41
TNRC6A-210ENST00000563201 ZBTB12Q9Y330 459 aaPredicted RBP6.24□□□□□ -1.41
TNRC6A-210ENST00000563201 REM2Q8IYK8 340 aaPredicted RBP6.17□□□□□ -1.42
TNRC6A-210ENST00000563201 PIP4P2Q8N4L2 257 aa6.16□□□□□ -1.42
TNRC6A-210ENST00000563201 HAX1O00165 279 aa6.13□□□□□ -1.43
TNRC6A-210ENST00000563201 FXR2P51116 673 aaKnown RBP eCLIP6.1□□□□□ -1.43
TNRC6A-210ENST00000563201 PITPNM1O00562 1244 aa6.09□□□□□ -1.43
TNRC6A-210ENST00000563201 OSCARQ8IYS5 282 aa6.09□□□□□ -1.43
TNRC6A-210ENST00000563201 FOXD4L1Q9NU39 408 aa6.07□□□□□ -1.44
TNRC6A-210ENST00000563201 ATF5Q9Y2D1 282 aaPredicted RBP6.07□□□□□ -1.44
TNRC6A-210ENST00000563201 SLC4A1APQ9BWU0 796 aaKnown RBP6.02□□□□□ -1.45
TNRC6A-210ENST00000563201 SPDYE2BA6NHP3 402 aa5.99□□□□□ -1.45
TNRC6A-210ENST00000563201 SPDYE6P0CI01 402 aa5.99□□□□□ -1.45
TNRC6A-210ENST00000563201 SPDYE2Q495Y8 402 aa5.99□□□□□ -1.45
TNRC6A-210ENST00000563201 EVX2Q03828 476 aa5.97□□□□□ -1.45
TNRC6A-210ENST00000563201 ATXN8OSP0DMR3 200 aa5.95□□□□□ -1.46
TNRC6A-210ENST00000563201 FBLN2P98095 1184 aa5.95□□□□□ -1.46
TNRC6A-210ENST00000563201 PRKAR2AP13861 404 aaKnown RBP5.94□□□□□ -1.46
TNRC6A-210ENST00000563201 SPDYE1Q8NFV5 336 aaPredicted RBP5.94□□□□□ -1.46
TNRC6A-210ENST00000563201 C19orf67A6NJJ6 358 aa5.92□□□□□ -1.46
TNRC6A-210ENST00000563201 CLEC11AQ9Y240 323 aa5.9□□□□□ -1.46
TNRC6A-210ENST00000563201 LHX8Q68G74 356 aa5.88□□□□□ -1.47
TNRC6A-210ENST00000563201 GABBR2O75899 941 aa5.87□□□□□ -1.47
TNRC6A-210ENST00000563201 ZNF692Q9BU19 519 aaPredicted RBP5.85□□□□□ -1.47
TNRC6A-210ENST00000563201 SSUH2Q9Y2M2 353 aa5.85□□□□□ -1.47
TNRC6A-210ENST00000563201 ZBTB22O15209 634 aa5.83□□□□□ -1.48
TNRC6A-210ENST00000563201 CLCN6P51797 869 aa5.81□□□□□ -1.48
TNRC6A-210ENST00000563201 PRR29P0C7W0 189 aa5.8□□□□□ -1.48
TNRC6A-210ENST00000563201 MKRN4PQ13434 485 aaPredicted RBP5.8□□□□□ -1.48
TNRC6A-210ENST00000563201 CHADLQ6NUI6 762 aa5.78□□□□□ -1.48
TNRC6A-210ENST00000563201 CD44P16070 742 aaKnown RBP5.75□□□□□ -1.49
TNRC6A-210ENST00000563201 PABPN1Q86U42 306 aaKnown RBP eCLIP5.75□□□□□ -1.49
TNRC6A-210ENST00000563201 POTEIP0CG38 1075 aa5.72□□□□□ -1.49
TNRC6A-210ENST00000563201 FARP1Q9Y4F1 1045 aaPredicted RBP5.72□□□□□ -1.49
TNRC6A-210ENST00000563201 DCBLD2Q96PD2 775 aa5.7□□□□□ -1.5
TNRC6A-210ENST00000563201 PLSCR2Q9NRY7 297 aa5.69□□□□□ -1.5
TNRC6A-210ENST00000563201 ZNF579Q8NAF0 562 aaKnown RBP5.66□□□□□ -1.5
TNRC6A-210ENST00000563201 ZRANB1Q9UGI0 708 aa5.62□□□□□ -1.51
TNRC6A-210ENST00000563201 STAG3Q9UJ98 1225 aa5.6□□□□□ -1.51
TNRC6A-210ENST00000563201 PAK3O75914 559 aaPredicted RBP5.58□□□□□ -1.52
TNRC6A-210ENST00000563201 OTUD5Q96G74 571 aa5.57□□□□□ -1.52
TNRC6A-210ENST00000563201 GALR2O43603 387 aaPredicted RBP5.56□□□□□ -1.52
TNRC6A-210ENST00000563201 EHMT2Q96KQ7 1210 aa5.56□□□□□ -1.52
TNRC6A-210ENST00000563201 CREBZFQ9NS37 354 aa5.56□□□□□ -1.52
TNRC6A-210ENST00000563201 POTEMA6NI47 508 aa5.55□□□□□ -1.52
TNRC6A-210ENST00000563201 PCDH10Q9P2E7 1040 aa5.54□□□□□ -1.52
TNRC6A-210ENST00000563201 NPM1P06748 294 aaKnown RBP eCLIP5.52□□□□□ -1.53
TNRC6A-210ENST00000563201 POTEGQ6S5H5 508 aa5.52□□□□□ -1.53
TNRC6A-210ENST00000563201 POTEB2H3BUK9 544 aa5.51□□□□□ -1.53
TNRC6A-210ENST00000563201 PHF12Q96QT6 1004 aa5.5□□□□□ -1.53
TNRC6A-210ENST00000563201 MAMSTRQ6ZN01 415 aa5.49□□□□□ -1.53
TNRC6A-210ENST00000563201 CSRNP3Q8WYN3 585 aa5.49□□□□□ -1.53
TNRC6A-210ENST00000563201 C7P10643 843 aa5.48□□□□□ -1.53
TNRC6A-210ENST00000563201 SLC39A7Q92504 469 aa5.48□□□□□ -1.53
TNRC6A-210ENST00000563201 ASTLQ6HA08 431 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms