RNA–Protein interactions for RNA: ENST00000562615.1

USP7-205, Transcript of ubiquitin specific peptidase 7, humanhuman

TSL 2

Gene USP7, Length 304 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP7-205ENST00000562615 AEBP2Q6ZN18 517 aaPredicted RBP22.14■■□□□ 1.13
USP7-205ENST00000562615 CHIC1Q5VXU3 224 aa21.22■□□□□ 0.99
USP7-205ENST00000562615 SENP3Q9H4L4 574 aaPredicted RBP18.92■□□□□ 0.62
USP7-205ENST00000562615 PHF23Q9BUL5 403 aaPredicted RBP18.68■□□□□ 0.58
USP7-205ENST00000562615 FOXD1Q16676 465 aa17.58■□□□□ 0.4
USP7-205ENST00000562615 PLPPR3Q6T4P5 718 aa17.05■□□□□ 0.32
USP7-205ENST00000562615 PPP6R1Q9UPN7 881 aa16.53■□□□□ 0.24
USP7-205ENST00000562615 ADRA2BP18089 450 aa16.5■□□□□ 0.23
USP7-205ENST00000562615 PIAS4Q8N2W9 510 aaPredicted RBP16.46■□□□□ 0.23
USP7-205ENST00000562615 MSH5O43196 834 aa16.44■□□□□ 0.22
USP7-205ENST00000562615 POTEDQ86YR6 584 aa15.73■□□□□ 0.11
USP7-205ENST00000562615 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
USP7-205ENST00000562615 MAPK8IP2Q13387 824 aaPredicted RBP15.09■□□□□ 0.01
USP7-205ENST00000562615 DMRT2Q9Y5R5 561 aa15.02■□□□□ -0
USP7-205ENST00000562615 PPP4R3CPQ6ZMV5 832 aa14.94□□□□□ -0.02
USP7-205ENST00000562615 CNKSR2Q8WXI2 1034 aa14.65□□□□□ -0.06
USP7-205ENST00000562615 HOXD11P31277 338 aaPredicted RBP14.53□□□□□ -0.08
USP7-205ENST00000562615 RNF216Q9NWF9 866 aaPredicted RBP14.47□□□□□ -0.09
USP7-205ENST00000562615 NCBP3Q53F19 620 aaKnown RBP14.46□□□□□ -0.09
USP7-205ENST00000562615 DCAF8L1A6NGE4 600 aa14.36□□□□□ -0.11
USP7-205ENST00000562615 NPM3O75607 178 aaKnown RBP14.2□□□□□ -0.14
USP7-205ENST00000562615 DNAJC5BQ9UF47 199 aa14.06□□□□□ -0.16
USP7-205ENST00000562615 KCNA4P22459 653 aa14.05□□□□□ -0.16
USP7-205ENST00000562615 RNF39Q9H2S5 420 aa14.01□□□□□ -0.17
USP7-205ENST00000562615 CACNB1Q02641 598 aaPredicted RBP13.98□□□□□ -0.17
USP7-205ENST00000562615 C1QBPQ07021 282 aaKnown RBP13.85□□□□□ -0.19
USP7-205ENST00000562615 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.84□□□□□ -0.19
USP7-205ENST00000562615 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
USP7-205ENST00000562615 SLC4A2P04920 1241 aa13.5□□□□□ -0.25
USP7-205ENST00000562615 SLC4A1APQ9BWU0 796 aaKnown RBP13.31□□□□□ -0.28
USP7-205ENST00000562615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.29□□□□□ -0.28
USP7-205ENST00000562615 HNRNPUL2Q1KMD3 747 aaKnown RBP13.29□□□□□ -0.28
USP7-205ENST00000562615 SPINK5Q9NQ38 1064 aaPredicted RBP13.29□□□□□ -0.28
USP7-205ENST00000562615 CAPN15O75808 1086 aa13.28□□□□□ -0.28
USP7-205ENST00000562615 APLP2Q06481 763 aa13.27□□□□□ -0.29
USP7-205ENST00000562615 SAMD1Q6SPF0 538 aaPredicted RBP13.2□□□□□ -0.3
USP7-205ENST00000562615 DSG3P32926 999 aa13.17□□□□□ -0.3
USP7-205ENST00000562615 MYCNP04198 464 aaPredicted RBP13.16□□□□□ -0.3
USP7-205ENST00000562615 ZNF219Q9P2Y4 722 aaPredicted RBP13.12□□□□□ -0.31
USP7-205ENST00000562615 TRHP20396 242 aaPredicted RBP13.1□□□□□ -0.31
USP7-205ENST00000562615 FOXD4L1Q9NU39 408 aa13.09□□□□□ -0.31
USP7-205ENST00000562615 ABCB7O75027 752 aa12.96□□□□□ -0.33
USP7-205ENST00000562615 ZBTB22O15209 634 aa12.89□□□□□ -0.35
USP7-205ENST00000562615 POLA2Q14181 598 aa12.79□□□□□ -0.36
USP7-205ENST00000562615 ATF5Q9Y2D1 282 aaPredicted RBP12.78□□□□□ -0.36
USP7-205ENST00000562615 ATXN8OSP0DMR3 200 aa12.72□□□□□ -0.37
USP7-205ENST00000562615 RBM42Q9BTD8 480 aaKnown RBP12.61□□□□□ -0.39
USP7-205ENST00000562615 ZBTB12Q9Y330 459 aaPredicted RBP12.6□□□□□ -0.39
USP7-205ENST00000562615 CSRNP3Q8WYN3 585 aa12.47□□□□□ -0.41
USP7-205ENST00000562615 POTEHQ6S545 545 aa12.37□□□□□ -0.43
USP7-205ENST00000562615 EHMT2Q96KQ7 1210 aa12.36□□□□□ -0.43
USP7-205ENST00000562615 OSCARQ8IYS5 282 aa12.35□□□□□ -0.43
USP7-205ENST00000562615 FBLN2P98095 1184 aa12.34□□□□□ -0.43
USP7-205ENST00000562615 AKT1S1Q96B36 256 aa12.34□□□□□ -0.43
USP7-205ENST00000562615 CHRDL2Q6WN34 429 aa12.23□□□□□ -0.45
USP7-205ENST00000562615 SPDYE2BA6NHP3 402 aa12.21□□□□□ -0.45
USP7-205ENST00000562615 SPDYE6P0CI01 402 aa12.21□□□□□ -0.45
USP7-205ENST00000562615 MKRN4PQ13434 485 aaPredicted RBP12.21□□□□□ -0.45
USP7-205ENST00000562615 SPDYE2Q495Y8 402 aa12.21□□□□□ -0.45
USP7-205ENST00000562615 REM2Q8IYK8 340 aaPredicted RBP12.2□□□□□ -0.46
USP7-205ENST00000562615 ZNF692Q9BU19 519 aaPredicted RBP12.07□□□□□ -0.48
USP7-205ENST00000562615 PITPNM1O00562 1244 aa12.05□□□□□ -0.48
USP7-205ENST00000562615 SSUH2Q9Y2M2 353 aa12.04□□□□□ -0.48
USP7-205ENST00000562615 PIP4P2Q8N4L2 257 aa11.97□□□□□ -0.49
USP7-205ENST00000562615 SPDYE1Q8NFV5 336 aaPredicted RBP11.95□□□□□ -0.5
USP7-205ENST00000562615 FXR2P51116 673 aaKnown RBP eCLIP11.94□□□□□ -0.54e-10■■■□□ 15.7
USP7-205ENST00000562615 CLEC11AQ9Y240 323 aa11.89□□□□□ -0.51
USP7-205ENST00000562615 PABPN1Q86U42 306 aaKnown RBP eCLIP11.88□□□□□ -0.51
USP7-205ENST00000562615 PRKAR2AP13861 404 aaKnown RBP11.75□□□□□ -0.53
USP7-205ENST00000562615 SPDYE4A6NLX3 237 aa11.74□□□□□ -0.53
USP7-205ENST00000562615 PRR29P0C7W0 189 aa11.74□□□□□ -0.53
USP7-205ENST00000562615 HAX1O00165 279 aa11.72□□□□□ -0.53
USP7-205ENST00000562615 SP7Q8TDD2 431 aaPredicted RBP11.67□□□□□ -0.54
USP7-205ENST00000562615 STAG3Q9UJ98 1225 aa11.65□□□□□ -0.54
USP7-205ENST00000562615 CHADLQ6NUI6 762 aa11.62□□□□□ -0.55
USP7-205ENST00000562615 C19orf67A6NJJ6 358 aa11.55□□□□□ -0.56
USP7-205ENST00000562615 EVX2Q03828 476 aa11.54□□□□□ -0.56
USP7-205ENST00000562615 PROM2Q8N271 834 aa11.5□□□□□ -0.57
USP7-205ENST00000562615 FARP1Q9Y4F1 1045 aaPredicted RBP11.5□□□□□ -0.57
USP7-205ENST00000562615 CREBZFQ9NS37 354 aa11.47□□□□□ -0.57
USP7-205ENST00000562615 CD44P16070 742 aaKnown RBP11.39□□□□□ -0.59
USP7-205ENST00000562615 GABBR2O75899 941 aa11.33□□□□□ -0.6
USP7-205ENST00000562615 NPM1P06748 294 aaKnown RBP eCLIP11.31□□□□□ -0.6
USP7-205ENST00000562615 FKBP8Q14318 412 aa11.3□□□□□ -0.6
USP7-205ENST00000562615 MNX1P50219 401 aaPredicted RBP11.29□□□□□ -0.6
USP7-205ENST00000562615 CLCN6P51797 869 aa11.29□□□□□ -0.6
USP7-205ENST00000562615 ZRANB1Q9UGI0 708 aa11.26□□□□□ -0.61
USP7-205ENST00000562615 ZNF579Q8NAF0 562 aaKnown RBP11.24□□□□□ -0.61
USP7-205ENST00000562615 PAK3O75914 559 aaPredicted RBP11.23□□□□□ -0.61
USP7-205ENST00000562615 PLEKHG5O94827 1062 aa11.21□□□□□ -0.61
USP7-205ENST00000562615 MIER1Q8N108 512 aa11.19□□□□□ -0.62
USP7-205ENST00000562615 PLCD3Q8N3E9 789 aa11.12□□□□□ -0.63
USP7-205ENST00000562615 FBXO3Q9UK99 471 aa11.09□□□□□ -0.63
USP7-205ENST00000562615 PHF12Q96QT6 1004 aa11.08□□□□□ -0.64
USP7-205ENST00000562615 ZBTB47Q9UFB7 747 aaPredicted RBP11.08□□□□□ -0.64
USP7-205ENST00000562615 DCBLD2Q96PD2 775 aa11.07□□□□□ -0.64
USP7-205ENST00000562615 POTEIP0CG38 1075 aa11.06□□□□□ -0.64
USP7-205ENST00000562615 GALR2O43603 387 aaPredicted RBP11.05□□□□□ -0.64
USP7-205ENST00000562615 TSPYL2Q9H2G4 693 aaPredicted RBP11.05□□□□□ -0.64
USP7-205ENST00000562615 CCDC61Q9Y6R9 512 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms