RNA–Protein interactions for RNA: ENST00000562064.1

LINC02188-201, Transcript of long intergenic non-protein coding RNA 2188, humanhuman

TSL 4 BASIC

Gene LINC02188, Length 550 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02188-201ENST00000562064 AEBP2Q6ZN18 517 aaPredicted RBP25.34■■□□□ 1.65
LINC02188-201ENST00000562064 CHIC1Q5VXU3 224 aa23.69■■□□□ 1.38
LINC02188-201ENST00000562064 SENP3Q9H4L4 574 aaPredicted RBP21.7■■□□□ 1.06
LINC02188-201ENST00000562064 PHF23Q9BUL5 403 aaPredicted RBP21.34■■□□□ 1.01
LINC02188-201ENST00000562064 FOXD1Q16676 465 aa20.26■□□□□ 0.83
LINC02188-201ENST00000562064 POTEDQ86YR6 584 aa19.42■□□□□ 0.7
LINC02188-201ENST00000562064 MSH5O43196 834 aa19.15■□□□□ 0.66
LINC02188-201ENST00000562064 PIAS4Q8N2W9 510 aaPredicted RBP18.86■□□□□ 0.61
LINC02188-201ENST00000562064 PLPPR3Q6T4P5 718 aa18.71■□□□□ 0.59
LINC02188-201ENST00000562064 PPP6R1Q9UPN7 881 aa18.6■□□□□ 0.57
LINC02188-201ENST00000562064 ADRA2BP18089 450 aa18.53■□□□□ 0.56
LINC02188-201ENST00000562064 MAPK8IP2Q13387 824 aaPredicted RBP17.15■□□□□ 0.34
LINC02188-201ENST00000562064 DMRT2Q9Y5R5 561 aa17.13■□□□□ 0.33
LINC02188-201ENST00000562064 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.31
LINC02188-201ENST00000562064 CACNB1Q02641 598 aaPredicted RBP16.71■□□□□ 0.27
LINC02188-201ENST00000562064 DCAF8L1A6NGE4 600 aa16.5■□□□□ 0.23
LINC02188-201ENST00000562064 PPP4R3CPQ6ZMV5 832 aa16.34■□□□□ 0.21
LINC02188-201ENST00000562064 HOXD11P31277 338 aaPredicted RBP16.32■□□□□ 0.2
LINC02188-201ENST00000562064 RNF39Q9H2S5 420 aa16.29■□□□□ 0.2
LINC02188-201ENST00000562064 CNKSR2Q8WXI2 1034 aa16.12■□□□□ 0.17
LINC02188-201ENST00000562064 RNF216Q9NWF9 866 aaPredicted RBP16.09■□□□□ 0.17
LINC02188-201ENST00000562064 C1QBPQ07021 282 aaKnown RBP16.02■□□□□ 0.16
LINC02188-201ENST00000562064 DNAJC5BQ9UF47 199 aa15.82■□□□□ 0.12
LINC02188-201ENST00000562064 NCBP3Q53F19 620 aaKnown RBP15.59■□□□□ 0.09
LINC02188-201ENST00000562064 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.59■□□□□ 0.09
LINC02188-201ENST00000562064 NPM3O75607 178 aaKnown RBP15.35■□□□□ 0.05
LINC02188-201ENST00000562064 U3KPZ7 1027 aaPredicted RBP15.2■□□□□ 0.02
LINC02188-201ENST00000562064 POTEHQ6S545 545 aa15.13■□□□□ 0.01
LINC02188-201ENST00000562064 CAPN15O75808 1086 aa15.12■□□□□ 0.01
LINC02188-201ENST00000562064 SPINK5Q9NQ38 1064 aaPredicted RBP15.11■□□□□ 0.01
LINC02188-201ENST00000562064 DSG3P32926 999 aa15.1■□□□□ 0.01
LINC02188-201ENST00000562064 SLC4A2P04920 1241 aa14.77□□□□□ -0.05
LINC02188-201ENST00000562064 TRHP20396 242 aaPredicted RBP14.77□□□□□ -0.05
LINC02188-201ENST00000562064 ABCB7O75027 752 aa14.74□□□□□ -0.05
LINC02188-201ENST00000562064 APLP2Q06481 763 aa14.74□□□□□ -0.05
LINC02188-201ENST00000562064 ZNF219Q9P2Y4 722 aaPredicted RBP14.72□□□□□ -0.05
LINC02188-201ENST00000562064 KCNA4P22459 653 aa14.68□□□□□ -0.06
LINC02188-201ENST00000562064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.62□□□□□ -0.07
LINC02188-201ENST00000562064 HNRNPUL2Q1KMD3 747 aaKnown RBP14.62□□□□□ -0.07
LINC02188-201ENST00000562064 SAMD1Q6SPF0 538 aaPredicted RBP14.52□□□□□ -0.09
LINC02188-201ENST00000562064 RBM42Q9BTD8 480 aaKnown RBP14.44□□□□□ -0.1
LINC02188-201ENST00000562064 CHRDL2Q6WN34 429 aa14.3□□□□□ -0.12
LINC02188-201ENST00000562064 POLA2Q14181 598 aa14.26□□□□□ -0.13
LINC02188-201ENST00000562064 MYCNP04198 464 aaPredicted RBP14.22□□□□□ -0.13
LINC02188-201ENST00000562064 AKT1S1Q96B36 256 aa14□□□□□ -0.17
LINC02188-201ENST00000562064 SP7Q8TDD2 431 aaPredicted RBP13.99□□□□□ -0.17
LINC02188-201ENST00000562064 ZBTB12Q9Y330 459 aaPredicted RBP13.95□□□□□ -0.18
LINC02188-201ENST00000562064 ATF5Q9Y2D1 282 aaPredicted RBP13.92□□□□□ -0.18
LINC02188-201ENST00000562064 REM2Q8IYK8 340 aaPredicted RBP13.88□□□□□ -0.19
LINC02188-201ENST00000562064 PIP4P2Q8N4L2 257 aa13.86□□□□□ -0.19
LINC02188-201ENST00000562064 OSCARQ8IYS5 282 aa13.85□□□□□ -0.19
LINC02188-201ENST00000562064 FOXD4L1Q9NU39 408 aa13.84□□□□□ -0.19
LINC02188-201ENST00000562064 SLC4A1APQ9BWU0 796 aaKnown RBP13.79□□□□□ -0.2
LINC02188-201ENST00000562064 PITPNM1O00562 1244 aa13.75□□□□□ -0.21
LINC02188-201ENST00000562064 HAX1O00165 279 aa13.74□□□□□ -0.21
LINC02188-201ENST00000562064 FXR2P51116 673 aaKnown RBP eCLIP13.69□□□□□ -0.22
LINC02188-201ENST00000562064 EVX2Q03828 476 aa13.5□□□□□ -0.25
LINC02188-201ENST00000562064 ZBTB22O15209 634 aa13.49□□□□□ -0.25
LINC02188-201ENST00000562064 SPDYE2BA6NHP3 402 aa13.47□□□□□ -0.25
LINC02188-201ENST00000562064 SPDYE6P0CI01 402 aa13.47□□□□□ -0.25
LINC02188-201ENST00000562064 SPDYE2Q495Y8 402 aa13.47□□□□□ -0.25
LINC02188-201ENST00000562064 ATXN8OSP0DMR3 200 aa13.44□□□□□ -0.26
LINC02188-201ENST00000562064 FBLN2P98095 1184 aa13.43□□□□□ -0.26
LINC02188-201ENST00000562064 PRKAR2AP13861 404 aaKnown RBP13.39□□□□□ -0.27
LINC02188-201ENST00000562064 CLEC11AQ9Y240 323 aa13.36□□□□□ -0.27
LINC02188-201ENST00000562064 SPDYE1Q8NFV5 336 aaPredicted RBP13.35□□□□□ -0.27
LINC02188-201ENST00000562064 C19orf67A6NJJ6 358 aa13.28□□□□□ -0.28
LINC02188-201ENST00000562064 MKRN4PQ13434 485 aaPredicted RBP13.25□□□□□ -0.29
LINC02188-201ENST00000562064 ZNF692Q9BU19 519 aaPredicted RBP13.25□□□□□ -0.29
LINC02188-201ENST00000562064 SSUH2Q9Y2M2 353 aa13.24□□□□□ -0.29
LINC02188-201ENST00000562064 EHMT2Q96KQ7 1210 aa13.2□□□□□ -0.3
LINC02188-201ENST00000562064 GABBR2O75899 941 aa13.19□□□□□ -0.3
LINC02188-201ENST00000562064 CHADLQ6NUI6 762 aa13.15□□□□□ -0.3
LINC02188-201ENST00000562064 LHX8Q68G74 356 aa13.11□□□□□ -0.31
LINC02188-201ENST00000562064 PRR29P0C7W0 189 aa13.07□□□□□ -0.32
LINC02188-201ENST00000562064 PABPN1Q86U42 306 aaKnown RBP eCLIP13.04□□□□□ -0.32
LINC02188-201ENST00000562064 CD44P16070 742 aaKnown RBP12.95□□□□□ -0.34
LINC02188-201ENST00000562064 FARP1Q9Y4F1 1045 aaPredicted RBP12.9□□□□□ -0.34
LINC02188-201ENST00000562064 POTEIP0CG38 1075 aa12.89□□□□□ -0.35
LINC02188-201ENST00000562064 CLCN6P51797 869 aa12.82□□□□□ -0.36
LINC02188-201ENST00000562064 CSRNP3Q8WYN3 585 aa12.82□□□□□ -0.36
LINC02188-201ENST00000562064 NISCHQ9Y2I1 1504 aa12.77□□□□□ -0.37
LINC02188-201ENST00000562064 DCBLD2Q96PD2 775 aa12.76□□□□□ -0.37
LINC02188-201ENST00000562064 ZNF579Q8NAF0 562 aaKnown RBP12.71□□□□□ -0.37
LINC02188-201ENST00000562064 ZRANB1Q9UGI0 708 aa12.69□□□□□ -0.38
LINC02188-201ENST00000562064 PLSCR2Q9NRY7 297 aa12.67□□□□□ -0.38
LINC02188-201ENST00000562064 CREBZFQ9NS37 354 aa12.63□□□□□ -0.39
LINC02188-201ENST00000562064 GALR2O43603 387 aaPredicted RBP12.59□□□□□ -0.39
LINC02188-201ENST00000562064 STAG3Q9UJ98 1225 aa12.58□□□□□ -0.4
LINC02188-201ENST00000562064 PAK3O75914 559 aaPredicted RBP12.51□□□□□ -0.41
LINC02188-201ENST00000562064 OTUD5Q96G74 571 aa12.51□□□□□ -0.41
LINC02188-201ENST00000562064 PHF12Q96QT6 1004 aa12.49□□□□□ -0.41
LINC02188-201ENST00000562064 POTEB2H3BUK9 544 aa12.46□□□□□ -0.41
LINC02188-201ENST00000562064 SPDYE4A6NLX3 237 aa12.42□□□□□ -0.42
LINC02188-201ENST00000562064 NPM1P06748 294 aaKnown RBP eCLIP12.4□□□□□ -0.42
LINC02188-201ENST00000562064 POTEMA6NI47 508 aa12.37□□□□□ -0.43
LINC02188-201ENST00000562064 PELP1Q8IZL8 1130 aaKnown RBP12.37□□□□□ -0.43
LINC02188-201ENST00000562064 MNX1P50219 401 aaPredicted RBP12.34□□□□□ -0.43
LINC02188-201ENST00000562064 POTEGQ6S5H5 508 aa12.33□□□□□ -0.44
LINC02188-201ENST00000562064 METRNQ9UJH8 293 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms