RNA–Protein interactions for RNA: ENST00000561845.1

AC006960.3-201, humanhuman

BASIC

Gene AC006960.3, Length 705 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006960.3-201ENST00000561845 AEBP2Q6ZN18 517 aaPredicted RBP22.63■■□□□ 1.21
AC006960.3-201ENST00000561845 CHIC1Q5VXU3 224 aa21.82■■□□□ 1.08
AC006960.3-201ENST00000561845 PHF23Q9BUL5 403 aaPredicted RBP19.21■□□□□ 0.67
AC006960.3-201ENST00000561845 SENP3Q9H4L4 574 aaPredicted RBP19.18■□□□□ 0.66
AC006960.3-201ENST00000561845 FOXD1Q16676 465 aa17.87■□□□□ 0.45
AC006960.3-201ENST00000561845 PLPPR3Q6T4P5 718 aa17.57■□□□□ 0.4
AC006960.3-201ENST00000561845 PPP6R1Q9UPN7 881 aa17.03■□□□□ 0.32
AC006960.3-201ENST00000561845 ADRA2BP18089 450 aa16.97■□□□□ 0.31
AC006960.3-201ENST00000561845 PIAS4Q8N2W9 510 aaPredicted RBP16.74■□□□□ 0.27
AC006960.3-201ENST00000561845 MSH5O43196 834 aa16.52■□□□□ 0.24
AC006960.3-201ENST00000561845 POTEDQ86YR6 584 aa15.62■□□□□ 0.09
AC006960.3-201ENST00000561845 MAPK8IP2Q13387 824 aaPredicted RBP15.48■□□□□ 0.07
AC006960.3-201ENST00000561845 PPP4R3CPQ6ZMV5 832 aa15.47■□□□□ 0.07
AC006960.3-201ENST00000561845 SCAF1Q9H7N4 1312 aaKnown RBP15.45■□□□□ 0.06
AC006960.3-201ENST00000561845 DMRT2Q9Y5R5 561 aa15.3■□□□□ 0.04
AC006960.3-201ENST00000561845 CNKSR2Q8WXI2 1034 aa15.09■□□□□ 0.01
AC006960.3-201ENST00000561845 NCBP3Q53F19 620 aaKnown RBP14.94□□□□□ -0.02
AC006960.3-201ENST00000561845 HOXD11P31277 338 aaPredicted RBP14.89□□□□□ -0.03
AC006960.3-201ENST00000561845 RNF216Q9NWF9 866 aaPredicted RBP14.86□□□□□ -0.03
AC006960.3-201ENST00000561845 KCNA4P22459 653 aa14.85□□□□□ -0.03
AC006960.3-201ENST00000561845 NPM3O75607 178 aaKnown RBP14.79□□□□□ -0.04
AC006960.3-201ENST00000561845 DCAF8L1A6NGE4 600 aa14.56□□□□□ -0.08
AC006960.3-201ENST00000561845 DNAJC5BQ9UF47 199 aa14.45□□□□□ -0.1
AC006960.3-201ENST00000561845 RNF39Q9H2S5 420 aa14.18□□□□□ -0.14
AC006960.3-201ENST00000561845 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.12□□□□□ -0.15
AC006960.3-201ENST00000561845 SLC4A2P04920 1241 aa14.06□□□□□ -0.16
AC006960.3-201ENST00000561845 SLC4A1APQ9BWU0 796 aaKnown RBP14.05□□□□□ -0.16
AC006960.3-201ENST00000561845 C1QBPQ07021 282 aaKnown RBP13.97□□□□□ -0.17
AC006960.3-201ENST00000561845 CACNB1Q02641 598 aaPredicted RBP13.93□□□□□ -0.18
AC006960.3-201ENST00000561845 U3KPZ7 1027 aaPredicted RBP13.93□□□□□ -0.18
AC006960.3-201ENST00000561845 FOXD4L1Q9NU39 408 aa13.7□□□□□ -0.22
AC006960.3-201ENST00000561845 ZBTB22O15209 634 aa13.69□□□□□ -0.22
AC006960.3-201ENST00000561845 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
AC006960.3-201ENST00000561845 SPINK5Q9NQ38 1064 aaPredicted RBP13.61□□□□□ -0.23
AC006960.3-201ENST00000561845 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.6□□□□□ -0.23
AC006960.3-201ENST00000561845 HNRNPUL2Q1KMD3 747 aaKnown RBP13.6□□□□□ -0.23
AC006960.3-201ENST00000561845 SAMD1Q6SPF0 538 aaPredicted RBP13.55□□□□□ -0.24
AC006960.3-201ENST00000561845 CAPN15O75808 1086 aa13.51□□□□□ -0.25
AC006960.3-201ENST00000561845 APLP2Q06481 763 aa13.48□□□□□ -0.25
AC006960.3-201ENST00000561845 DSG3P32926 999 aa13.41□□□□□ -0.26
AC006960.3-201ENST00000561845 TRHP20396 242 aaPredicted RBP13.39□□□□□ -0.27
AC006960.3-201ENST00000561845 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
AC006960.3-201ENST00000561845 ZNF219Q9P2Y4 722 aaPredicted RBP13.38□□□□□ -0.27
AC006960.3-201ENST00000561845 ATF5Q9Y2D1 282 aaPredicted RBP13.35□□□□□ -0.27
AC006960.3-201ENST00000561845 EHMT2Q96KQ7 1210 aa13.34□□□□□ -0.27
AC006960.3-201ENST00000561845 ATXN8OSP0DMR3 200 aa13.26□□□□□ -0.29
AC006960.3-201ENST00000561845 ABCB7O75027 752 aa13.25□□□□□ -0.29
AC006960.3-201ENST00000561845 POLA2Q14181 598 aa13.15□□□□□ -0.3
AC006960.3-201ENST00000561845 ZBTB12Q9Y330 459 aaPredicted RBP12.87□□□□□ -0.35
AC006960.3-201ENST00000561845 MKRN4PQ13434 485 aaPredicted RBP12.76□□□□□ -0.37
AC006960.3-201ENST00000561845 RBM42Q9BTD8 480 aaKnown RBP12.72□□□□□ -0.37
AC006960.3-201ENST00000561845 FBLN2P98095 1184 aa12.71□□□□□ -0.37
AC006960.3-201ENST00000561845 OSCARQ8IYS5 282 aa12.71□□□□□ -0.37
AC006960.3-201ENST00000561845 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
AC006960.3-201ENST00000561845 SPDYE2BA6NHP3 402 aa12.53□□□□□ -0.4
AC006960.3-201ENST00000561845 SPDYE6P0CI01 402 aa12.53□□□□□ -0.4
AC006960.3-201ENST00000561845 SPDYE2Q495Y8 402 aa12.53□□□□□ -0.4
AC006960.3-201ENST00000561845 REM2Q8IYK8 340 aaPredicted RBP12.44□□□□□ -0.42
AC006960.3-201ENST00000561845 SSUH2Q9Y2M2 353 aa12.44□□□□□ -0.42
AC006960.3-201ENST00000561845 ZNF692Q9BU19 519 aaPredicted RBP12.43□□□□□ -0.42
AC006960.3-201ENST00000561845 CHRDL2Q6WN34 429 aa12.32□□□□□ -0.44
AC006960.3-201ENST00000561845 SPDYE4A6NLX3 237 aa12.29□□□□□ -0.44
AC006960.3-201ENST00000561845 PITPNM1O00562 1244 aa12.29□□□□□ -0.44
AC006960.3-201ENST00000561845 POTEHQ6S545 545 aa12.29□□□□□ -0.44
AC006960.3-201ENST00000561845 PABPN1Q86U42 306 aaKnown RBP eCLIP12.27□□□□□ -0.45
AC006960.3-201ENST00000561845 SPDYE1Q8NFV5 336 aaPredicted RBP12.21□□□□□ -0.45
AC006960.3-201ENST00000561845 CLEC11AQ9Y240 323 aa12.15□□□□□ -0.46
AC006960.3-201ENST00000561845 FXR2P51116 673 aaKnown RBP eCLIP12.13□□□□□ -0.47
AC006960.3-201ENST00000561845 PROM2Q8N271 834 aa12.12□□□□□ -0.47
AC006960.3-201ENST00000561845 PIP4P2Q8N4L2 257 aa12.12□□□□□ -0.47
AC006960.3-201ENST00000561845 FKBP8Q14318 412 aa12.06□□□□□ -0.48
AC006960.3-201ENST00000561845 PRR29P0C7W0 189 aa12.02□□□□□ -0.49
AC006960.3-201ENST00000561845 STAG3Q9UJ98 1225 aa11.99□□□□□ -0.49
AC006960.3-201ENST00000561845 PRKAR2AP13861 404 aaKnown RBP11.96□□□□□ -0.49
AC006960.3-201ENST00000561845 CHADLQ6NUI6 762 aa11.91□□□□□ -0.5
AC006960.3-201ENST00000561845 CREBZFQ9NS37 354 aa11.86□□□□□ -0.51
AC006960.3-201ENST00000561845 FARP1Q9Y4F1 1045 aaPredicted RBP11.79□□□□□ -0.52
AC006960.3-201ENST00000561845 HAX1O00165 279 aa11.76□□□□□ -0.53
AC006960.3-201ENST00000561845 MNX1P50219 401 aaPredicted RBP11.74□□□□□ -0.53
AC006960.3-201ENST00000561845 EVX2Q03828 476 aa11.73□□□□□ -0.53
AC006960.3-201ENST00000561845 C19orf67A6NJJ6 358 aa11.72□□□□□ -0.53
AC006960.3-201ENST00000561845 FBXO3Q9UK99 471 aa11.68□□□□□ -0.54
AC006960.3-201ENST00000561845 MIER1Q8N108 512 aa11.67□□□□□ -0.54
AC006960.3-201ENST00000561845 SP7Q8TDD2 431 aaPredicted RBP11.63□□□□□ -0.55
AC006960.3-201ENST00000561845 CD44P16070 742 aaKnown RBP11.59□□□□□ -0.55
AC006960.3-201ENST00000561845 PLCD3Q8N3E9 789 aa11.59□□□□□ -0.55
AC006960.3-201ENST00000561845 NPM1P06748 294 aaKnown RBP eCLIP11.58□□□□□ -0.56
AC006960.3-201ENST00000561845 PLEKHG5O94827 1062 aa11.56□□□□□ -0.56
AC006960.3-201ENST00000561845 VASPP50552 380 aaPredicted RBP11.56□□□□□ -0.56
AC006960.3-201ENST00000561845 ZRANB1Q9UGI0 708 aa11.49□□□□□ -0.57
AC006960.3-201ENST00000561845 ZBTB47Q9UFB7 747 aaPredicted RBP11.48□□□□□ -0.57
AC006960.3-201ENST00000561845 ZNF579Q8NAF0 562 aaKnown RBP11.46□□□□□ -0.57
AC006960.3-201ENST00000561845 NUBP1P53384 320 aa11.45□□□□□ -0.58
AC006960.3-201ENST00000561845 RASEFQ8IZ41 740 aa11.45□□□□□ -0.58
AC006960.3-201ENST00000561845 GABBR2O75899 941 aa11.44□□□□□ -0.58
AC006960.3-201ENST00000561845 PAK3O75914 559 aaPredicted RBP11.43□□□□□ -0.58
AC006960.3-201ENST00000561845 IFNLR1Q8IU57 520 aaPredicted RBP11.42□□□□□ -0.58
AC006960.3-201ENST00000561845 TSPYL2Q9H2G4 693 aaPredicted RBP11.41□□□□□ -0.58
AC006960.3-201ENST00000561845 PHF12Q96QT6 1004 aa11.38□□□□□ -0.59
AC006960.3-201ENST00000561845 CCDC61Q9Y6R9 512 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms