RNA–Protein interactions for RNA: ENST00000561685.1

RRN3-204, Transcript of RRN3 homolog, RNA polymerase I transcription factor, humanhuman

TSL 5

Gene RRN3, Length 615 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3-204ENST00000561685 AEBP2Q6ZN18 517 aaPredicted RBP22.32■■□□□ 1.16
RRN3-204ENST00000561685 CHIC1Q5VXU3 224 aa21.54■■□□□ 1.04
RRN3-204ENST00000561685 SENP3Q9H4L4 574 aaPredicted RBP19.1■□□□□ 0.65
RRN3-204ENST00000561685 PHF23Q9BUL5 403 aaPredicted RBP18.84■□□□□ 0.61
RRN3-204ENST00000561685 FOXD1Q16676 465 aa17.7■□□□□ 0.42
RRN3-204ENST00000561685 PLPPR3Q6T4P5 718 aa17.37■□□□□ 0.37
RRN3-204ENST00000561685 PPP6R1Q9UPN7 881 aa16.71■□□□□ 0.27
RRN3-204ENST00000561685 ADRA2BP18089 450 aa16.68■□□□□ 0.26
RRN3-204ENST00000561685 PIAS4Q8N2W9 510 aaPredicted RBP16.63■□□□□ 0.25
RRN3-204ENST00000561685 MSH5O43196 834 aa16.55■□□□□ 0.24
RRN3-204ENST00000561685 POTEDQ86YR6 584 aa15.61■□□□□ 0.09
RRN3-204ENST00000561685 SCAF1Q9H7N4 1312 aaKnown RBP15.4■□□□□ 0.06
RRN3-204ENST00000561685 MAPK8IP2Q13387 824 aaPredicted RBP15.22■□□□□ 0.03
RRN3-204ENST00000561685 PPP4R3CPQ6ZMV5 832 aa15.21■□□□□ 0.03
RRN3-204ENST00000561685 DMRT2Q9Y5R5 561 aa15.17■□□□□ 0.02
RRN3-204ENST00000561685 CNKSR2Q8WXI2 1034 aa14.9□□□□□ -0.02
RRN3-204ENST00000561685 NCBP3Q53F19 620 aaKnown RBP14.78□□□□□ -0.04
RRN3-204ENST00000561685 HOXD11P31277 338 aaPredicted RBP14.73□□□□□ -0.05
RRN3-204ENST00000561685 RNF216Q9NWF9 866 aaPredicted RBP14.7□□□□□ -0.06
RRN3-204ENST00000561685 NPM3O75607 178 aaKnown RBP14.5□□□□□ -0.09
RRN3-204ENST00000561685 DCAF8L1A6NGE4 600 aa14.49□□□□□ -0.09
RRN3-204ENST00000561685 KCNA4P22459 653 aa14.43□□□□□ -0.1
RRN3-204ENST00000561685 DNAJC5BQ9UF47 199 aa14.25□□□□□ -0.13
RRN3-204ENST00000561685 RNF39Q9H2S5 420 aa14.1□□□□□ -0.15
RRN3-204ENST00000561685 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.02□□□□□ -0.171e-10■■□□□ 14.2
RRN3-204ENST00000561685 CACNB1Q02641 598 aaPredicted RBP13.98□□□□□ -0.17
RRN3-204ENST00000561685 C1QBPQ07021 282 aaKnown RBP13.96□□□□□ -0.17
RRN3-204ENST00000561685 SLC4A2P04920 1241 aa13.75□□□□□ -0.21
RRN3-204ENST00000561685 U3KPZ7 1027 aaPredicted RBP13.74□□□□□ -0.21
RRN3-204ENST00000561685 SLC4A1APQ9BWU0 796 aaKnown RBP13.72□□□□□ -0.21
RRN3-204ENST00000561685 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.55□□□□□ -0.24
RRN3-204ENST00000561685 HNRNPUL2Q1KMD3 747 aaKnown RBP13.55□□□□□ -0.24
RRN3-204ENST00000561685 APLP2Q06481 763 aa13.51□□□□□ -0.25
RRN3-204ENST00000561685 MYCNP04198 464 aaPredicted RBP13.45□□□□□ -0.26
RRN3-204ENST00000561685 SAMD1Q6SPF0 538 aaPredicted RBP13.45□□□□□ -0.26
RRN3-204ENST00000561685 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
RRN3-204ENST00000561685 CAPN15O75808 1086 aa13.43□□□□□ -0.26
RRN3-204ENST00000561685 SPINK5Q9NQ38 1064 aaPredicted RBP13.42□□□□□ -0.26
RRN3-204ENST00000561685 ZNF219Q9P2Y4 722 aaPredicted RBP13.33□□□□□ -0.28
RRN3-204ENST00000561685 DSG3P32926 999 aa13.29□□□□□ -0.28
RRN3-204ENST00000561685 TRHP20396 242 aaPredicted RBP13.26□□□□□ -0.29
RRN3-204ENST00000561685 ZBTB22O15209 634 aa13.24□□□□□ -0.29
RRN3-204ENST00000561685 ABCB7O75027 752 aa13.1□□□□□ -0.31
RRN3-204ENST00000561685 ATXN8OSP0DMR3 200 aa13.04□□□□□ -0.32
RRN3-204ENST00000561685 ATF5Q9Y2D1 282 aaPredicted RBP13.01□□□□□ -0.33
RRN3-204ENST00000561685 POLA2Q14181 598 aa12.97□□□□□ -0.33
RRN3-204ENST00000561685 CSRNP3Q8WYN3 585 aa12.91□□□□□ -0.34
RRN3-204ENST00000561685 EHMT2Q96KQ7 1210 aa12.87□□□□□ -0.35
RRN3-204ENST00000561685 ZBTB12Q9Y330 459 aaPredicted RBP12.84□□□□□ -0.35
RRN3-204ENST00000561685 RBM42Q9BTD8 480 aaKnown RBP12.76□□□□□ -0.37
RRN3-204ENST00000561685 FBLN2P98095 1184 aa12.6□□□□□ -0.39
RRN3-204ENST00000561685 OSCARQ8IYS5 282 aa12.55□□□□□ -0.4
RRN3-204ENST00000561685 AKT1S1Q96B36 256 aa12.48□□□□□ -0.41
RRN3-204ENST00000561685 MKRN4PQ13434 485 aaPredicted RBP12.45□□□□□ -0.42
RRN3-204ENST00000561685 SPDYE2BA6NHP3 402 aa12.43□□□□□ -0.42
RRN3-204ENST00000561685 SPDYE6P0CI01 402 aa12.43□□□□□ -0.42
RRN3-204ENST00000561685 SPDYE2Q495Y8 402 aa12.43□□□□□ -0.42
RRN3-204ENST00000561685 REM2Q8IYK8 340 aaPredicted RBP12.32□□□□□ -0.44
RRN3-204ENST00000561685 POTEHQ6S545 545 aa12.31□□□□□ -0.44
RRN3-204ENST00000561685 CHRDL2Q6WN34 429 aa12.3□□□□□ -0.44
RRN3-204ENST00000561685 ZNF692Q9BU19 519 aaPredicted RBP12.29□□□□□ -0.44
RRN3-204ENST00000561685 SSUH2Q9Y2M2 353 aa12.27□□□□□ -0.45
RRN3-204ENST00000561685 PITPNM1O00562 1244 aa12.18□□□□□ -0.46
RRN3-204ENST00000561685 SPDYE1Q8NFV5 336 aaPredicted RBP12.14□□□□□ -0.47
RRN3-204ENST00000561685 PABPN1Q86U42 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
RRN3-204ENST00000561685 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
RRN3-204ENST00000561685 CLEC11AQ9Y240 323 aa12.05□□□□□ -0.48
RRN3-204ENST00000561685 FXR2P51116 673 aaKnown RBP eCLIP12.04□□□□□ -0.48
RRN3-204ENST00000561685 PIP4P2Q8N4L2 257 aa12.04□□□□□ -0.48
RRN3-204ENST00000561685 PRR29P0C7W0 189 aa11.92□□□□□ -0.5
RRN3-204ENST00000561685 STAG3Q9UJ98 1225 aa11.91□□□□□ -0.5
RRN3-204ENST00000561685 PRKAR2AP13861 404 aaKnown RBP11.87□□□□□ -0.51
RRN3-204ENST00000561685 PROM2Q8N271 834 aa11.82□□□□□ -0.52
RRN3-204ENST00000561685 HAX1O00165 279 aa11.76□□□□□ -0.53
RRN3-204ENST00000561685 CHADLQ6NUI6 762 aa11.76□□□□□ -0.53
RRN3-204ENST00000561685 FKBP8Q14318 412 aa11.71□□□□□ -0.53
RRN3-204ENST00000561685 SP7Q8TDD2 431 aaPredicted RBP11.68□□□□□ -0.54
RRN3-204ENST00000561685 FARP1Q9Y4F1 1045 aaPredicted RBP11.66□□□□□ -0.54
RRN3-204ENST00000561685 CREBZFQ9NS37 354 aa11.65□□□□□ -0.54
RRN3-204ENST00000561685 C19orf67A6NJJ6 358 aa11.64□□□□□ -0.55
RRN3-204ENST00000561685 EVX2Q03828 476 aa11.56□□□□□ -0.56
RRN3-204ENST00000561685 CD44P16070 742 aaKnown RBP11.53□□□□□ -0.56
RRN3-204ENST00000561685 NPM1P06748 294 aaKnown RBP eCLIP11.52□□□□□ -0.57
RRN3-204ENST00000561685 PLEKHG5O94827 1062 aa11.51□□□□□ -0.57
RRN3-204ENST00000561685 MNX1P50219 401 aaPredicted RBP11.49□□□□□ -0.57
RRN3-204ENST00000561685 FBXO3Q9UK99 471 aa11.48□□□□□ -0.57
RRN3-204ENST00000561685 MIER1Q8N108 512 aa11.46□□□□□ -0.57
RRN3-204ENST00000561685 PAK3O75914 559 aaPredicted RBP11.43□□□□□ -0.58
RRN3-204ENST00000561685 CLCN6P51797 869 aa11.43□□□□□ -0.58
RRN3-204ENST00000561685 PLCD3Q8N3E9 789 aa11.42□□□□□ -0.58
RRN3-204ENST00000561685 ZBTB47Q9UFB7 747 aaPredicted RBP11.4□□□□□ -0.58
RRN3-204ENST00000561685 ZRANB1Q9UGI0 708 aa11.39□□□□□ -0.59
RRN3-204ENST00000561685 GABBR2O75899 941 aa11.38□□□□□ -0.59
RRN3-204ENST00000561685 ZNF579Q8NAF0 562 aaKnown RBP11.38□□□□□ -0.59
RRN3-204ENST00000561685 VASPP50552 380 aaPredicted RBP11.27□□□□□ -0.61
RRN3-204ENST00000561685 TSPYL2Q9H2G4 693 aaPredicted RBP11.24□□□□□ -0.61
RRN3-204ENST00000561685 PHF12Q96QT6 1004 aa11.22□□□□□ -0.61
RRN3-204ENST00000561685 RASEFQ8IZ41 740 aa11.21□□□□□ -0.61
RRN3-204ENST00000561685 CCDC61Q9Y6R9 512 aa11.21□□□□□ -0.61
RRN3-204ENST00000561685 NUBP1P53384 320 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms