RNA–Protein interactions for RNA: ENST00000561349.6

CSNK1G1-202, Transcript of casein kinase 1 gamma 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK1G1, Length 1,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1-202ENST00000561349 AEBP2Q6ZN18 517 aaPredicted RBP16.03■□□□□ 0.16
CSNK1G1-202ENST00000561349 CHIC1Q5VXU3 224 aa15.68■□□□□ 0.1
CSNK1G1-202ENST00000561349 NISCHQ9Y2I1 1504 aa14.14□□□□□ -0.15
CSNK1G1-202ENST00000561349 PHF23Q9BUL5 403 aaPredicted RBP13.8□□□□□ -0.2
CSNK1G1-202ENST00000561349 SENP3Q9H4L4 574 aaPredicted RBP13.61□□□□□ -0.23
CSNK1G1-202ENST00000561349 POTEDQ86YR6 584 aa12.93□□□□□ -0.34
CSNK1G1-202ENST00000561349 PLPPR3Q6T4P5 718 aa12.75□□□□□ -0.37
CSNK1G1-202ENST00000561349 FOXD1Q16676 465 aa12.64□□□□□ -0.39
CSNK1G1-202ENST00000561349 CCDC180Q9P1Z9 1646 aa12.42□□□□□ -0.42
CSNK1G1-202ENST00000561349 ADRA2BP18089 450 aa12.19□□□□□ -0.46
CSNK1G1-202ENST00000561349 PPP6R1Q9UPN7 881 aa12.18□□□□□ -0.46
CSNK1G1-202ENST00000561349 PIAS4Q8N2W9 510 aaPredicted RBP11.94□□□□□ -0.5
CSNK1G1-202ENST00000561349 ZCCHC6Q5VYS8 1495 aaKnown RBP11.92□□□□□ -0.5
CSNK1G1-202ENST00000561349 DCAF1Q9Y4B6 1507 aa11.68□□□□□ -0.54
CSNK1G1-202ENST00000561349 MSH5O43196 834 aa11.64□□□□□ -0.55
CSNK1G1-202ENST00000561349 ABCC9O60706 1549 aa11.63□□□□□ -0.55
CSNK1G1-202ENST00000561349 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
CSNK1G1-202ENST00000561349 SHROOM4Q9ULL8 1493 aa11.53□□□□□ -0.56
CSNK1G1-202ENST00000561349 MYO15BQ96JP2 1530 aa11.51□□□□□ -0.57
CSNK1G1-202ENST00000561349 DCAF8L2P0C7V8 631 aa11.51□□□□□ -0.57
CSNK1G1-202ENST00000561349 NACADO15069 1562 aa11.46□□□□□ -0.57
CSNK1G1-202ENST00000561349 SCRIBQ14160 1630 aa11.42□□□□□ -0.58
CSNK1G1-202ENST00000561349 RB1CC1Q8TDY2 1594 aa11.37□□□□□ -0.59
CSNK1G1-202ENST00000561349 MYT1Q01538 1121 aa11.34□□□□□ -0.59
CSNK1G1-202ENST00000561349 UNC13AQ9UPW8 1703 aa11.33□□□□□ -0.6
CSNK1G1-202ENST00000561349 HRCP23327 699 aa11.31□□□□□ -0.6
CSNK1G1-202ENST00000561349 PPP4R3CPQ6ZMV5 832 aa11.25□□□□□ -0.61
CSNK1G1-202ENST00000561349 SCAF1Q9H7N4 1312 aaKnown RBP11.14□□□□□ -0.63
CSNK1G1-202ENST00000561349 BICRAQ9NZM4 1560 aa11.09□□□□□ -0.63
CSNK1G1-202ENST00000561349 MAPK8IP2Q13387 824 aaPredicted RBP11.05□□□□□ -0.64
CSNK1G1-202ENST00000561349 SUPT5HO00267 1087 aaKnown RBP11.02□□□□□ -0.65
CSNK1G1-202ENST00000561349 KCNA4P22459 653 aa11.01□□□□□ -0.65
CSNK1G1-202ENST00000561349 CECR2Q9BXF3 1484 aa11□□□□□ -0.65
CSNK1G1-202ENST00000561349 NCBP3Q53F19 620 aaKnown RBP10.97□□□□□ -0.65
CSNK1G1-202ENST00000561349 MROH2BQ7Z745 1585 aa10.95□□□□□ -0.66
CSNK1G1-202ENST00000561349 RSF1Q96T23 1441 aaPredicted RBP10.95□□□□□ -0.66
CSNK1G1-202ENST00000561349 SMARCA4P51532 1647 aa10.93□□□□□ -0.66
CSNK1G1-202ENST00000561349 BAZ1AQ9NRL2 1556 aaPredicted RBP10.92□□□□□ -0.66
CSNK1G1-202ENST00000561349 WIZO95785 1651 aa10.92□□□□□ -0.66
CSNK1G1-202ENST00000561349 CNKSR2Q8WXI2 1034 aa10.92□□□□□ -0.66
CSNK1G1-202ENST00000561349 PABPN1Q86U42 306 aaKnown RBP eCLIP10.88□□□□□ -0.67
CSNK1G1-202ENST00000561349 DMRT2Q9Y5R5 561 aa10.86□□□□□ -0.67
CSNK1G1-202ENST00000561349 TTBK1Q5TCY1 1321 aaPredicted RBP10.82□□□□□ -0.68
CSNK1G1-202ENST00000561349 NPM3O75607 178 aaKnown RBP10.79□□□□□ -0.68
CSNK1G1-202ENST00000561349 TOP2AP11388 1531 aaKnown RBP10.77□□□□□ -0.69
CSNK1G1-202ENST00000561349 PPARGC1BQ86YN6 1023 aaKnown RBP10.77□□□□□ -0.69
CSNK1G1-202ENST00000561349 PEG3Q9GZU2 1588 aa10.76□□□□□ -0.69
CSNK1G1-202ENST00000561349 PCGF6Q9BYE7 350 aa10.72□□□□□ -0.69
CSNK1G1-202ENST00000561349 EIF4G1Q04637 1599 aaKnown RBP10.72□□□□□ -0.69
CSNK1G1-202ENST00000561349 RNF216Q9NWF9 866 aaPredicted RBP10.69□□□□□ -0.7
CSNK1G1-202ENST00000561349 SMARCA2P51531 1590 aa10.69□□□□□ -0.7
CSNK1G1-202ENST00000561349 ZEB1P37275 1124 aaPredicted RBP10.67□□□□□ -0.7
CSNK1G1-202ENST00000561349 ATAD2BQ9ULI0 1458 aa10.65□□□□□ -0.7
CSNK1G1-202ENST00000561349 HOXD11P31277 338 aaPredicted RBP10.63□□□□□ -0.71
CSNK1G1-202ENST00000561349 BAZ1BQ9UIG0 1483 aaKnown RBP10.61□□□□□ -0.71
CSNK1G1-202ENST00000561349 HMGXB3Q12766 1538 aa10.6□□□□□ -0.71
CSNK1G1-202ENST00000561349 CCDC88BA6NC98 1476 aa10.6□□□□□ -0.71
CSNK1G1-202ENST00000561349 CC2D2AQ9P2K1 1620 aa10.57□□□□□ -0.72
CSNK1G1-202ENST00000561349 NCAPD3P42695 1498 aa10.52□□□□□ -0.72
CSNK1G1-202ENST00000561349 TRIM26Q12899 539 aaPredicted RBP10.51□□□□□ -0.73
CSNK1G1-202ENST00000561349 SLC4A1APQ9BWU0 796 aaKnown RBP10.5□□□□□ -0.73
CSNK1G1-202ENST00000561349 ACIN1Q9UKV3 1341 aaKnown RBP10.49□□□□□ -0.73
CSNK1G1-202ENST00000561349 PRDM2Q13029 1718 aa10.49□□□□□ -0.73
CSNK1G1-202ENST00000561349 ABCC8Q09428 1581 aa10.47□□□□□ -0.73
CSNK1G1-202ENST00000561349 DCAF8L1A6NGE4 600 aa10.47□□□□□ -0.73
CSNK1G1-202ENST00000561349 DNAJC5BQ9UF47 199 aa10.39□□□□□ -0.75
CSNK1G1-202ENST00000561349 CACNB1Q02641 598 aaPredicted RBP10.39□□□□□ -0.75
CSNK1G1-202ENST00000561349 CENPBP07199 599 aaPredicted RBP10.37□□□□□ -0.75
CSNK1G1-202ENST00000561349 SYNJ1O43426 1573 aa10.37□□□□□ -0.75
CSNK1G1-202ENST00000561349 NEUROD1Q13562 356 aa10.34□□□□□ -0.75
CSNK1G1-202ENST00000561349 BIVM-ERCC5R4GMW8 1640 aa10.33□□□□□ -0.76
CSNK1G1-202ENST00000561349 TRIM41Q8WV44 630 aa10.32□□□□□ -0.76
CSNK1G1-202ENST00000561349 CFTRP13569 1480 aa10.32□□□□□ -0.76
CSNK1G1-202ENST00000561349 GTF3C3Q9Y5Q9 886 aa10.31□□□□□ -0.76
CSNK1G1-202ENST00000561349 WRNQ14191 1432 aaPredicted RBP eCLIP10.3□□□□□ -0.76
CSNK1G1-202ENST00000561349 TOP2BQ02880 1626 aa10.29□□□□□ -0.76
CSNK1G1-202ENST00000561349 CUX1P39880 1505 aa10.25□□□□□ -0.77
CSNK1G1-202ENST00000561349 EHMT2Q96KQ7 1210 aa10.25□□□□□ -0.77
CSNK1G1-202ENST00000561349 NESP48681 1621 aa10.24□□□□□ -0.77
CSNK1G1-202ENST00000561349 LAMC3Q9Y6N6 1575 aa10.23□□□□□ -0.77
CSNK1G1-202ENST00000561349 CADPSQ9ULU8 1353 aa10.23□□□□□ -0.77
CSNK1G1-202ENST00000561349 KIF21AQ7Z4S6 1674 aa10.22□□□□□ -0.77
CSNK1G1-202ENST00000561349 BCL11AQ9H165 835 aa10.21□□□□□ -0.77
CSNK1G1-202ENST00000561349 SOGA1O94964 1423 aa10.19□□□□□ -0.78
CSNK1G1-202ENST00000561349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.19□□□□□ -0.783e-7■■□□□ 12.8
CSNK1G1-202ENST00000561349 RUSC2Q8N2Y8 1516 aa10.19□□□□□ -0.78
CSNK1G1-202ENST00000561349 FAM9AQ8IZU1 332 aaPredicted RBP10.19□□□□□ -0.78
CSNK1G1-202ENST00000561349 FANCD2Q9BXW9 1451 aa10.18□□□□□ -0.78
CSNK1G1-202ENST00000561349 SLC4A2P04920 1241 aa10.17□□□□□ -0.78
CSNK1G1-202ENST00000561349 LOC105371045A0A1W2PR82 267 aa10.16□□□□□ -0.78
CSNK1G1-202ENST00000561349 DNMBPQ6XZF7 1577 aa10.15□□□□□ -0.78
CSNK1G1-202ENST00000561349 EEA1Q15075 1411 aa10.14□□□□□ -0.79
CSNK1G1-202ENST00000561349 CEP164Q9UPV0 1460 aa10.13□□□□□ -0.79
CSNK1G1-202ENST00000561349 WDR97A6NE52 1622 aa10.12□□□□□ -0.79
CSNK1G1-202ENST00000561349 KIF21BO75037 1637 aa10.12□□□□□ -0.79
CSNK1G1-202ENST00000561349 CLSPNQ9HAW4 1339 aa10.12□□□□□ -0.79
CSNK1G1-202ENST00000561349 FGD5Q6ZNL6 1462 aa10.11□□□□□ -0.79
CSNK1G1-202ENST00000561349 ZBTB22O15209 634 aa10.11□□□□□ -0.79
CSNK1G1-202ENST00000561349 FOXD4L1Q9NU39 408 aa10.11□□□□□ -0.79
CSNK1G1-202ENST00000561349 TOPBP1Q92547 1522 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms